Gorai.007G236800 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.007G236800 T287641_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.801 0.785
AtMYB93
M07020_2.00 		Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD		 Dap-seq
OMalley et al.(2016)
MYB93_col_a 		0.798 0.882
AtMYB93
M07021_2.00 		Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN		 Dap-seq
OMalley et al.(2016)
MYB93_colamp_a 		0.798 0.882
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.759 0.828
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.759 0.828
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.747 0.817
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.747 0.817
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.701 0.774
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.701 0.774
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.699 0.753
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.685 0.796
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.682 0.774
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.682 0.774
ATY53
M07078_2.00 		Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN
NNNNNNNNDDHGKTWGGTRVR		 Dap-seq
OMalley et al.(2016)
MYB67_col_a 		0.663 0.667
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G236800.1 Myb 14 61
Gorai.007G236800.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

657 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RAX1 Arabidopsis lyrata Al_scaffold_0006_2171 I
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N
MYB35 Arabidopsis thaliana AT3G28470 N
RAX1 Arabidopsis thaliana AT5G23000 I
BGIOSGA010923 Oryza indica BGIOSGA010923 I
BGIOSGA017601 Oryza indica BGIOSGA017601 I
Bo2g024590 Brassica oleracea Bo2g024590 I
Bo7g091360 Brassica oleracea Bo7g091360 N
Bostr.0556s0504 Boechera stricta Bostr.0556s0504 N
Bostr.10199s0146 Boechera stricta Bostr.10199s0146 I
Bra002448 Brassica rapa Bra002448 I
Bra020228 Brassica rapa Bra020228 I
Bra025337 Brassica rapa Bra025337 N
BRADI2G17280 Brachypodium distachyon BRADI2G17280 N
Cagra.2310s0015 Capsella grandiflora Cagra.2310s0015 N
Cagra.3954s0035 Capsella grandiflora Cagra.3954s0035 I
Carubv10002949m.g Capsella rubella Carubv10002949m.g I
Carubv10017650m.g Capsella rubella Carubv10017650m.g N
cassava26191.m1 Manihot esculenta cassava26191.m1 N
cassava27944.m1 Manihot esculenta cassava27944.m1 N
cassava41279.m1 Manihot esculenta cassava41279.m1 N
Ca_10555 Cicer arietinum Ca_10555 N
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N
Cla019436 Citrullus lanatus Cla019436 N
Cucsa.197410 Cucumis sativus Cucsa.197410 N
Cucsa.339230 Cucumis sativus Cucsa.339230 N
estExt_Genewise1.C_360117 Physcomitrella patens estExt_Genewise1.C_360117 N
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I
F775_14388 Aegilops tauschii F775_14388 I
ATMYB35 Arabidopsis lyrata fgenesh2_kg.5__614__AT3G28470.1 N
gene01311-v1.0-hybrid Fragaria vesca gene01311-v1.0-hybrid N
gene02643-v1.0-hybrid Fragaria vesca gene02643-v1.0-hybrid I
GLYMA13G04920 Glycine max GLYMA13G04920 I
GLYMA19G02090 Glycine max GLYMA19G02090 I
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N
GRMZM2G069325 Zea mays GRMZM2G069325 I
GRMZM2G308034 Zea mays GRMZM2G308034 I
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I
GSMUA_Achr4G25260_001 Musa acuminata GSMUA_Achr4G25260_001 I
gw1.65.181.1 Physcomitrella patens gw1.65.181.1 N
LPERR03G12200 Leersia perrieri LPERR03G12200 I
LPERR05G20870 Leersia perrieri LPERR05G20870 I
Lus10033119.g Linum usitatissimum Lus10033119.g N
Lus10036660.g Linum usitatissimum Lus10036660.g N
Lus10039462.g Linum usitatissimum Lus10039462.g N
MDP0000258046 Malus domestica MDP0000258046 N
mgf012871m Mimulus guttatus mgf012871m I
MLOC_44167 Hordeum vulgare MLOC_44167 I
MTR_3g045430 Medicago truncatula MTR_3g045430 N
MTR_6g009430 Medicago truncatula MTR_6g009430 N
OB03G23760 Oryza brachyantha OB03G23760 I
OBART03G13840 Oryza barthii OBART03G13840 I
OGLUM03G13980 Oryza glumaepatula OGLUM03G13980 I
OMERI03G12640 Oryza meridionalis OMERI03G12640 I
ONIVA03G15100 Oryza nivara ONIVA03G15100 I
OPUNC03G13320 Oryza punctata OPUNC03G13320 I
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I
ORGLA03G0133600 Oryza glaberrima ORGLA03G0133600 I
ORGLA05G0216200 Oryza glaberrima ORGLA05G0216200 I
ORUFI03G14500 Oryza rufipogon ORUFI03G14500 I
ORUFI05G26880 Oryza rufipogon ORUFI05G26880 I
OS05G0553400 Oryza sativa OS05G0553400 I
Pavir.Db01456 Panicum virgatum Pavir.Db01456 I
Pavir.J11789 Panicum virgatum Pavir.J11789 I
Pavir.J15551 Panicum virgatum Pavir.J15551 I
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I
PDK_20s1406481g002 Phoenix dactylifera PDK_20s1406481g002 N
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I
Pm015813 Prunus mume Pm015813 N
Pm024633 Prunus mume Pm024633 N
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N
ATMYB35 Populus trichocarpa POPTR_0017s11140 N
PRUPE_ppa015976mg Prunus persica PRUPE_ppa015976mg N
PRUPE_ppa017571mg Prunus persica PRUPE_ppa017571mg N
SapurV1A.0138s0120 Salix purpurea SapurV1A.0138s0120 N
SapurV1A.0161s0110 Salix purpurea SapurV1A.0161s0110 N
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I
Sb01g038250 Sorghum bicolor Sb01g038250 I
Sb09g027800 Sorghum bicolor Sb09g027800 I
Si022874m.g Setaria italica Si022874m.g I
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I
TCM_018082 Theobroma cacao TCM_018082 N
TCM_045715 Theobroma cacao TCM_045715 N
Thhalv10005502m.g Eutrema salsugineum Thhalv10005502m.g N
Thhalv10014063m.g Eutrema salsugineum Thhalv10014063m.g I
Traes_4AS_4EFBA88E4 Triticum aestivum Traes_4AS_4EFBA88E4 I
Traes_4BL_532725AD5 Triticum aestivum Traes_4BL_532725AD5 I
Traes_4DL_DFCF4A15A Triticum aestivum Traes_4DL_DFCF4A15A I
Traes_7AL_5B57EF9FC Triticum aestivum Traes_7AL_5B57EF9FC I
Traes_7DL_20EC9096A Triticum aestivum Traes_7DL_20EC9096A I
VIT_04s0008g00620 Vitis vinifera VIT_04s0008g00620 I
ATMYB35 Vitis vinifera VIT_14s0066g02180 N
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I