orange1.1g008254m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g008254m.g T288770_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
APRR2
M02300_2.00 		Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102 		0.890 0.957
GPRI1
M00874_2.00 		Arabidopsis thaliana
NNDATHN
NDATHNN		 PBM
Franco-Zorrilla et al.(2014)
GLK1 		0.696 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g008254m Myb 332 382
orange1.1g008619m Myb 319 369
orange1.1g008626m Myb 319 369
orange1.1g012449m Myb 223 273
orange1.1g012756m Myb 217 267

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29983.m003131 Ricinus communis 29983.m003131 I 0.675
30054.m000786 Ricinus communis 30054.m000786 I 0.884
AMTR_s00058p00133630 Amborella trichopoda AMTR_s00058p00133630 I 0.675
AMTR_s00149p00035260 Amborella trichopoda AMTR_s00149p00035260 I 0.753
Aquca_044_00072 Aquilegia coerulea Aquca_044_00072 I 0.852
GPRI1 Arabidopsis thaliana AT2G20570 D 0.696
APRR2 Arabidopsis thaliana AT4G18020 D 0.890
GLK2 Arabidopsis thaliana AT5G44190 I 0.726
Bo1g019180 Brassica oleracea Bo1g019180 I 0.868
Bo7g067200 Brassica oleracea Bo7g067200 I 0.664
Bo7g105690 Brassica oleracea Bo7g105690 I 0.868
Bostr.30275s0270 Boechera stricta Bostr.30275s0270 I 0.868
Bostr.3148s0040 Boechera stricta Bostr.3148s0040 I 0.726
Bostr.7903s0106 Boechera stricta Bostr.7903s0106 I 0.696
Bra012623 Brassica rapa Bra012623 I 0.868
Bra013277 Brassica rapa Bra013277 I 0.868
Bra013278 Brassica rapa Bra013278 I 0.868
Bra013279 Brassica rapa Bra013279 I 0.868
Bra033726 Brassica rapa Bra033726 I 0.664
Cagra.0381s0008 Capsella grandiflora Cagra.0381s0008 I 0.726
Cagra.1595s0002 Capsella grandiflora Cagra.1595s0002 I 0.801
Cagra.2516s0014 Capsella grandiflora Cagra.2516s0014 I 0.696
Carubv10004540m.g Capsella rubella Carubv10004540m.g I 0.801
Carubv10014114m.g Capsella rubella Carubv10014114m.g I 0.696
Carubv10026528m.g Capsella rubella Carubv10026528m.g I 0.726
cassava2466.valid.m1 Manihot esculenta cassava2466.valid.m1 I 0.857
cassava42047.valid.m1 Manihot esculenta cassava42047.valid.m1 I 0.794
cassava42048.valid.m1 Manihot esculenta cassava42048.valid.m1 I 0.794
cassava43649.valid.m1 Manihot esculenta cassava43649.valid.m1 I 0.675
cassava43650.valid.m1 Manihot esculenta cassava43650.valid.m1 I 0.675
Ca_02285 Cicer arietinum Ca_02285 I 0.820
Ca_12825 Cicer arietinum Ca_12825 I 0.812
Ca_24009 Cicer arietinum Ca_24009 I 0.753
chr2.CM0021.770.nc Lotus japonicus chr2.CM0021.770.nc I 0.802
chr4.CM0831.100.nd Lotus japonicus chr4.CM0831.100.nd I 0.812
Ciclev10015266m.g Citrus clementina Ciclev10015266m.g I 0.675
Ciclev10031120m.g Citrus clementina Ciclev10031120m.g I 0.909
Cla003791 Citrullus lanatus Cla003791 I 0.696
Cla008926 Citrullus lanatus Cla008926 I 0.876
Cla016403 Citrullus lanatus Cla016403 I 0.746
Cucsa.087530 Cucumis sativus Cucsa.087530 I 0.696
Cucsa.313480 Cucumis sativus Cucsa.313480 I 0.732
Cucsa.321580 Cucumis sativus Cucsa.321580 I 0.876
Eucgr.E00308 Eucalyptus grandis Eucgr.E00308 I 0.901
Eucgr.K01056 Eucalyptus grandis Eucgr.K01056 I 0.722
evm.TU.supercontig_6.428 Carica papaya evm.TU.supercontig_6.428 I 0.849
GPRI1 Arabidopsis lyrata fgenesh2_kg.3__3588__AT2G20570.1 I 0.696
APRR2 Arabidopsis lyrata fgenesh2_kg.7__2503__AT4G18020.2 I 0.890
fgenesh2_kg.8__391__AT5G44190.1 Arabidopsis lyrata fgenesh2_kg.8__391__AT5G44190.1 I 0.726
gene10484-v1.0-hybrid Fragaria vesca gene10484-v1.0-hybrid I 0.909
gene17750-v1.0-hybrid Fragaria vesca gene17750-v1.0-hybrid I 0.675
GLYMA01G40900 Glycine max GLYMA01G40900 I 0.802
GLYMA05G06070 Glycine max GLYMA05G06070 I 0.771
GLYMA11G04441 Glycine max GLYMA11G04441 I 0.802
GLYMA17G16360 Glycine max GLYMA17G16360 I 0.808
Gorai.002G020300 Gossypium raimondii Gorai.002G020300 I 0.675
Gorai.003G180100 Gossypium raimondii Gorai.003G180100 I 0.780
Gorai.004G188300 Gossypium raimondii Gorai.004G188300 I 0.786
Gorai.008G228800 Gossypium raimondii Gorai.008G228800 I 0.820
Gorai.012G126600 Gossypium raimondii Gorai.012G126600 I 0.675
GSMUA_Achr11G17740_001 Musa acuminata GSMUA_Achr11G17740_001 I 0.738
GSMUA_Achr2G18200_001 Musa acuminata GSMUA_Achr2G18200_001 I 0.700
Lus10003013.g Linum usitatissimum Lus10003013.g I 0.795
Lus10011044.g Linum usitatissimum Lus10011044.g I 0.857
Lus10018649.g Linum usitatissimum Lus10018649.g I 0.696
Lus10030938.g Linum usitatissimum Lus10030938.g I 0.734
Lus10033642.g Linum usitatissimum Lus10033642.g I 0.696
Lus10039883.g Linum usitatissimum Lus10039883.g I 0.696
Lus10040109.g Linum usitatissimum Lus10040109.g I 0.836
MDP0000225179 Malus domestica MDP0000225179 I 0.675
MDP0000237396 Malus domestica MDP0000237396 I 0.895
MDP0000248863 Malus domestica MDP0000248863 I 0.845
MDP0000526864 Malus domestica MDP0000526864 I 0.675
mgf007181m Mimulus guttatus mgf007181m I 0.693
mgf012846m Mimulus guttatus mgf012846m I 0.693
MTR_4g098870 Medicago truncatula MTR_4g098870 I 0.805
MTR_5g014040 Medicago truncatula MTR_5g014040 I 0.786
orange1.1g013528m.g Citrus sinensis orange1.1g013528m.g I 0.675
PDK_20s1585631g001 Phoenix dactylifera PDK_20s1585631g001 I 0.842
PGSC0003DMG400024217 Solanum tuberosum PGSC0003DMG400024217 I 0.812
PGSC0003DMG400026587 Solanum tuberosum PGSC0003DMG400026587 I 0.732
PK19826.1 Cannabis sativa PK19826.1 I 0.909
PK27491.1 Cannabis sativa PK27491.1 I 0.675
Pm014123 Prunus mume Pm014123 I 0.675
Pm014733 Prunus mume Pm014733 I 0.909
POPTR_0001s02910 Populus trichocarpa POPTR_0001s02910 I 0.813
POPTR_0003s08600 Populus trichocarpa POPTR_0003s08600 I 0.795
POPTR_0007s01230 Populus trichocarpa POPTR_0007s01230 I 0.675
POPTR_0017s04720 Populus trichocarpa POPTR_0017s04720 I 0.675
PRUPE_ppa004161mg Prunus persica PRUPE_ppa004161mg I 0.909
PRUPE_ppa014599mg Prunus persica PRUPE_ppa014599mg I 0.675
SapurV1A.0118s0260 Salix purpurea SapurV1A.0118s0260 I 0.675
SapurV1A.0132s0010 Salix purpurea SapurV1A.0132s0010 I 0.831
SapurV1A.0693s0070 Salix purpurea SapurV1A.0693s0070 I 0.675
SapurV1A.1296s0050 Salix purpurea SapurV1A.1296s0050 I 0.838
SapurV1A.1950s0030 Salix purpurea SapurV1A.1950s0030 I 0.675
SELMODRAFT_428906 Selaginella moellendorffii SELMODRAFT_428906 I 0.802
Solyc06g061030.2 Solanum lycopersicum Solyc06g061030.2 I 0.732
Solyc08g077230.2 Solanum lycopersicum Solyc08g077230.2 I 0.812
TCM_008193 Theobroma cacao TCM_008193 I 0.675
TCM_015780 Theobroma cacao TCM_015780 I 0.860
Thhalv10003223m.g Eutrema salsugineum Thhalv10003223m.g I 0.726
Thhalv10024919m.g Eutrema salsugineum Thhalv10024919m.g I 0.868
APRR2 Vitis vinifera VIT_02s0012g00570 I 0.856