Bra001366 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra001366 T292510_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.944 0.895
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.944 0.895
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra001366.1-P NAC/NAM 28 154

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB34088 Xenopus laevis AAB34088 I 0.000
AAK54135 Xenopus tropicalis AAK54135 I 0.000
AAK54137 Xenopus laevis AAK54137 I 0.000
AAK54139 Xenopus laevis AAK54139 I 0.000
Aan_R012932 Calypte anna Aan_R012932 I 0.000
Afo_R005870 Aptenodytes forsteri Afo_R005870 I 0.000
Alligator_sinensis_CCG016283.1 Alligator sinensis Alligator_sinensis_CCG016283.1 I 0.000
Brh_R006038 Buceros rhinoceros Brh_R006038 I 0.000
CapteG76255 Capitella teleta CapteG76255 I 0.000
Cmyd_10017446 Chelonia mydas Cmyd_10017446 I 0.000
SNAI2 Anolis carolinensis ENSACAG00000012332 I 0.000
ENSAMEG00000009606 Ailuropoda melanoleuca ENSAMEG00000009606 I 0.000
ENSAMXG00000011013 Astyanax mexicanus ENSAMXG00000011013 I 0.000
ENSAPLG00000003920 Anas platyrhynchos ENSAPLG00000003920 I 0.000
SNAI2 Bos taurus ENSBTAG00000013227 I 0.000
SNAI2 Canis familiaris ENSCAFG00000006638 I 0.000
SNAI2 Choloepus hoffmanni ENSCHOG00000007046 I 0.000
SNAI2 Callithrix jacchus ENSCJAG00000013499 I 0.000
ENSCPOG00000014827 Cavia porcellus ENSCPOG00000014827 I 0.000
ENSCSAG00000014787 Chlorocebus sabaeus ENSCSAG00000014787 I 0.000
snai2 Danio rerio ENSDARG00000040046 I 0.000
SNAI2 Dasypus novemcinctus ENSDNOG00000035997 I 0.000
SNAI2 Equus caballus ENSECAG00000010120 I 0.000
ENSFALG00000005762 Ficedula albicollis ENSFALG00000005762 I 0.000
SNAI2 Felis catus ENSFCAG00000015779 I 0.000
SNAI2 Homo sapiens ENSG00000019549 D 0.000
snai2 Gasterosteus aculeatus ENSGACG00000017935 I 0.000
ENSGALG00000015241 Gallus gallus ENSGALG00000015241 I 0.000
SNAI2 Gorilla gorilla ENSGGOG00000000959 I 0.000
ENSGMOG00000002669 Gadus morhua ENSGMOG00000002669 I 0.000
ENSLACG00000004705 Latimeria chalumnae ENSLACG00000004705 I 0.000
ENSLACG00000005413 Latimeria chalumnae ENSLACG00000005413 I 0.000
ENSLACG00000017707 Latimeria chalumnae ENSLACG00000017707 I 0.000
SNAI2 Loxodonta africana ENSLAFG00000009299 I 0.000
ENSLOCG00000004887 Lepisosteus oculatus ENSLOCG00000004887 I 0.000
ENSLOCG00000005992 Lepisosteus oculatus ENSLOCG00000005992 I 0.000
ENSMEUG00000009510 Macropus eugenii ENSMEUG00000009510 I 0.000
SNAI2 Meleagris gallopavo ENSMGAG00000010813 I 0.000
SNAI2 Microcebus murinus ENSMICG00000000335 I 0.000
SNAI2 Myotis lucifugus ENSMLUG00000001086 I 0.000
SNAI2 Macaca mulatta ENSMMUG00000016195 I 0.000
SNAI2 Monodelphis domestica ENSMODG00000010173 I 0.000
ENSMPUG00000010793 Mustela putorius furo ENSMPUG00000010793 I 0.000
Snai2 Mus musculus ENSMUSG00000022676 D 0.000
ENSNLEG00000013421 Nomascus leucogenys ENSNLEG00000013421 I 0.000
SNAI2 Ornithorhynchus anatinus ENSOANG00000007267 I 0.000
ENSOARG00000013030 Ovis aries ENSOARG00000013030 I 0.000
SNAI2 Oryctolagus cuniculus ENSOCUG00000012254 I 0.000
SNAI2 Otolemur garnettii ENSOGAG00000010500 I 0.000
ENSONIG00000009542 Oreochromis niloticus ENSONIG00000009542 I 0.000
snai2 Oryzias latipes ENSORLG00000017475 I 0.000
ENSP00000020945-D1 Bos grunniens ENSP00000020945-D1 I 0.000
ENSP00000380034 Macaca fascicularis ENSP00000380034 I 0.000
ENSPANG00000017540 Papio anubis ENSPANG00000017540 I 0.000
SNAI2 Procavia capensis ENSPCAG00000001788 I 0.000
ENSPFOG00000014336 Poecilia formosa ENSPFOG00000014336 I 0.000
ENSPPYG00000018578 Pongo abelii ENSPPYG00000018578 I 0.000
ENSPSIG00000003607 Pelodiscus sinensis ENSPSIG00000003607 I 0.000
ENSPSIG00000016395 Pelodiscus sinensis ENSPSIG00000016395 I 0.000
SNAI2 Pan troglodytes ENSPTRG00000020235 I 0.000
SNAI2 Pteropus vampyrus ENSPVAG00000009457 I 0.000
Snai2 Rattus norvegicus ENSRNOG00000047699 I 0.000
ENSSHAG00000004205 Sarcophilus harrisii ENSSHAG00000004205 I 0.000
ENSSSCG00000026570 Sus scrofa ENSSSCG00000026570 I 0.000
ENSSTOG00000028743 Ictidomys tridecemlineatus ENSSTOG00000028743 I 0.000
SNAI2 Taeniopygia guttata ENSTGUG00000010914 I 0.000
snai2 Tetraodon nigroviridis ENSTNIG00000008504 I 0.000
snai2 Takifugu rubripes ENSTRUG00000006860 I 0.000
ENSXMAG00000019030 Xiphophorus maculatus ENSXMAG00000019030 I 0.000
esg Drosophila melanogaster FBgn0001981 D 0.000
GA17666 Drosophila pseudoobscura FBgn0077676 I 0.000
GF15382 Drosophila ananassae FBgn0092407 I 0.000
GG25158 Drosophila erecta FBgn0117283 I 0.000
GH13754 Drosophila grimshawi FBgn0121230 I 0.000
GI17894 Drosophila mojavensis FBgn0140635 I 0.000
GL26425 Drosophila persimilis FBgn0164007 I 0.000
GD24004 Drosophila simulans FBgn0195364 I 0.000
GJ17399 Drosophila virilis FBgn0204571 I 0.000
GK18133 Drosophila willistoni FBgn0220132 I 0.000
GE20968 Drosophila yakuba FBgn0238253 I 0.000
Gfo_R012649 Geospiza fortis Gfo_R012649 I 0.000
HMEL002306 Heliconius melpomene HMEL002306 I 0.000
KGM_17970 Danaus plexippus KGM_17970 I 0.000
L798_10614 Zootermopsis nevadensis L798_10614 I 0.000
LCUP013268 Lucilia cuprina LCUP013268 I 0.000
LDEC001157 Leptinotarsa decemlineata LDEC001157 I 0.000
LotgiG114290 Lottia gigantea LotgiG114290 I 0.000
MCINX001355 Melitaea cinxia MCINX001355 I 0.000
MDOA014024 Musca domestica MDOA014024 I 0.000
Myotis_brandtii_Snai2_10018131 Myotis brandtii Myotis_brandtii_Snai2_10018131 I 0.000
Ogr04681 Ophisaurus gracilis Ogr04681 I 0.000
PPAI008011 Phlebotomus papatasi PPAI008011 I 0.000
Pvit_15376 Pogona vitticeps Pvit_15376 I 0.000
Sakowv30043351m.g Saccoglossus kowalevskii Sakowv30043351m.g I 0.000
Tal_R003673 Tyto alba Tal_R003673 I 0.000
TC014474 Tribolium castaneum TC014474 I 0.000
snai1 Xenopus tropicalis XB-GENE-479970 I 0.000
snai2 Xenopus tropicalis XB-GENE-487371 I 0.000
snai2.L Xenopus laevis XB-GENE-6255814 I 0.000
snai1.S Xenopus laevis XB-GENE-865328 I 0.000
snai2.S Xenopus laevis XB-GENE-865699 I 0.000