SMUV_0000886001 (Syphacia muris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMUV_0000886001 T310428_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.850 0.571
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000886001-mRNA-1 Nuclear receptor 45 114

Links

Other Nuclear receptor family TFs
Other Syphacia muris TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000388601 Angiostrongylus cantonensis ACAC_0000388601 N 0.779
BXY_0777500 Bursaphelenchus xylophilus BXY_0777500 N 0.794
BXY_1188900 Bursaphelenchus xylophilus BXY_1188900 N 0.774
BXY_1598800 Bursaphelenchus xylophilus BXY_1598800 N 0.807
CBG03687 Caenorhabditis briggsae CBG03687 I 0.763
CBG12152 Caenorhabditis briggsae CBG12152 I 0.889
CBG16375 Caenorhabditis briggsae CBG16375 I 0.923
CBN03440 Caenorhabditis brenneri CBN03440 I 0.765
CBN03769 Caenorhabditis brenneri CBN03769 I 0.879
CBN04619 Caenorhabditis brenneri CBN04619 I 0.874
CBN16902 Caenorhabditis brenneri CBN16902 I 0.838
CBN24070 Caenorhabditis brenneri CBN24070 I 0.828
CJA04414 Caenorhabditis japonica CJA04414 I 0.828
CJA07390 Caenorhabditis japonica CJA07390 I 0.828
CJA10576 Caenorhabditis japonica CJA10576 I 0.919
CRE17310 Caenorhabditis remanei CRE17310 I 0.765
CRE17354 Caenorhabditis remanei CRE17354 I 0.821
CRE18529 Caenorhabditis remanei CRE18529 I 0.887
CRE27174 Caenorhabditis remanei CRE27174 I 0.813
CRE27659 Caenorhabditis remanei CRE27659 I 0.883
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.795
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.943
GPLIN_001629700 Globodera pallida GPLIN_001629700 N 0.799
L596_g27594 Steinernema carpocapsae L596_g27594 N 0.779
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.885
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.841
L889_g10781 Steinernema feltiae L889_g10781 I 0.848
L889_g21170 Steinernema feltiae L889_g21170 N 0.779
L889_g9698 Steinernema feltiae L889_g9698 I 0.956
L889_g987 Steinernema feltiae L889_g987 I 0.956
L892_g10708 Steinernema scapterisci L892_g10708 I 0.847
L892_g15823 Steinernema scapterisci L892_g15823 N 0.779
L892_g8140 Steinernema scapterisci L892_g8140 I 0.943
L892_g8144 Steinernema scapterisci L892_g8144 I 0.867
L892_g8145 Steinernema scapterisci L892_g8145 I 0.960
L893_g2090 Steinernema glaseri L893_g2090 I 0.860
L893_g4569 Steinernema glaseri L893_g4569 I 0.959
L893_g9517 Steinernema glaseri L893_g9517 I 0.930
L898_g10723 Steinernema monticolum L898_g10723 I 0.918
L898_g28806 Steinernema monticolum L898_g28806 I 0.884
L898_g30838 Steinernema monticolum L898_g30838 N 0.779
MhA1_Contig2502.frz3.gene1 Meloidogyne hapla MhA1_Contig2502.frz3.gene1 N 0.802
NECAME_01500 Necator americanus NECAME_01500 I 0.844
PPA08785 Pristionchus pacificus PPA08785 I 0.855
PPA10478 Pristionchus pacificus PPA10478 I 0.855
PPA29361 Pristionchus pacificus PPA29361 I 0.762
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.796
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.855
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.855
SMUV_0000241401 Syphacia muris SMUV_0000241401 I 0.790
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.977
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.803
SPAL_0001578700 Strongyloides papillosus SPAL_0001578700 N 0.753
SVE_0983600 Strongyloides venezuelensis SVE_0983600 N 0.753
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.833
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.752
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.921
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.850
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.915
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.882