SVE_0146100 (Strongyloides venezuelensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SVE_0146100 T310636_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.987 0.871
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.974 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVE_0146100.1 Nuclear receptor 11 80

Links

Other Nuclear receptor family TFs
Other Strongyloides venezuelensis TFs

309 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.000
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N 0.000
MYB35 Arabidopsis thaliana AT3G28470 N 0.000
BGIOSGA010923 Oryza indica BGIOSGA010923 I 0.000
BGIOSGA017601 Oryza indica BGIOSGA017601 I 0.000
Bo7g091360 Brassica oleracea Bo7g091360 N 0.000
Bostr.0556s0504 Boechera stricta Bostr.0556s0504 N 0.000
Bra025337 Brassica rapa Bra025337 N 0.000
Cagra.2310s0015 Capsella grandiflora Cagra.2310s0015 N 0.000
Carubv10017650m.g Capsella rubella Carubv10017650m.g N 0.000
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.000
cassava27944.m1 Manihot esculenta cassava27944.m1 N 0.000
cassava41279.m1 Manihot esculenta cassava41279.m1 N 0.000
Ca_10555 Cicer arietinum Ca_10555 N 0.000
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.000
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N 0.000
Cla019436 Citrullus lanatus Cla019436 N 0.000
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.000
Cucsa.339230 Cucumis sativus Cucsa.339230 N 0.000
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.000
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.000
F775_14388 Aegilops tauschii F775_14388 I 0.000
ATMYB35 Arabidopsis lyrata fgenesh2_kg.5__614__AT3G28470.1 N 0.000
gene01311-v1.0-hybrid Fragaria vesca gene01311-v1.0-hybrid N 0.000
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.000
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.000
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.000
GRMZM2G069325 Zea mays GRMZM2G069325 I 0.000
GRMZM2G308034 Zea mays GRMZM2G308034 I 0.000
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I 0.000
LPERR03G12200 Leersia perrieri LPERR03G12200 I 0.000
LPERR05G20870 Leersia perrieri LPERR05G20870 I 0.000
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.000
Lus10033119.g Linum usitatissimum Lus10033119.g N 0.000
Lus10036660.g Linum usitatissimum Lus10036660.g N 0.000
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.000
MDP0000258046 Malus domestica MDP0000258046 N 0.000
mgf012871m Mimulus guttatus mgf012871m I 0.000
OB03G23760 Oryza brachyantha OB03G23760 I 0.000
OBART03G13840 Oryza barthii OBART03G13840 I 0.000
OGLUM03G13980 Oryza glumaepatula OGLUM03G13980 I 0.000
OMERI03G12640 Oryza meridionalis OMERI03G12640 I 0.000
ONIVA03G15100 Oryza nivara ONIVA03G15100 I 0.000
OPUNC03G13320 Oryza punctata OPUNC03G13320 I 0.000
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.000
ORGLA03G0133600 Oryza glaberrima ORGLA03G0133600 I 0.000
ORGLA05G0216200 Oryza glaberrima ORGLA05G0216200 I 0.000
ORUFI03G14500 Oryza rufipogon ORUFI03G14500 I 0.000
ORUFI05G26880 Oryza rufipogon ORUFI05G26880 I 0.000
OS05G0553400 Oryza sativa OS05G0553400 I 0.000
Pavir.Db01456 Panicum virgatum Pavir.Db01456 I 0.000
Pavir.J11789 Panicum virgatum Pavir.J11789 I 0.000
Pavir.J15551 Panicum virgatum Pavir.J15551 I 0.000
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.000
PDK_20s1406481g002 Phoenix dactylifera PDK_20s1406481g002 N 0.000
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I 0.000
Pm015813 Prunus mume Pm015813 N 0.000
Pm024633 Prunus mume Pm024633 N 0.000
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.000
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N 0.000
ATMYB35 Populus trichocarpa POPTR_0017s11140 N 0.000
PRUPE_ppa015976mg Prunus persica PRUPE_ppa015976mg N 0.000
PRUPE_ppa017571mg Prunus persica PRUPE_ppa017571mg N 0.000
SapurV1A.0138s0120 Salix purpurea SapurV1A.0138s0120 N 0.000
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.000
Sb01g038250 Sorghum bicolor Sb01g038250 I 0.000
Sb09g027800 Sorghum bicolor Sb09g027800 I 0.000
Si022874m.g Setaria italica Si022874m.g I 0.000
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I 0.000
TCM_018082 Theobroma cacao TCM_018082 N 0.000
TCM_045715 Theobroma cacao TCM_045715 N 0.000
Thhalv10005502m.g Eutrema salsugineum Thhalv10005502m.g N 0.000
Traes_4AS_4EFBA88E4 Triticum aestivum Traes_4AS_4EFBA88E4 I 0.000
Traes_4BL_532725AD5 Triticum aestivum Traes_4BL_532725AD5 I 0.000
Traes_4DL_DFCF4A15A Triticum aestivum Traes_4DL_DFCF4A15A I 0.000
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.000
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.000