ENSSTOG00000029194 (Ictidomys tridecemlineatus)
p53

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00870 (P53) IPR011615 ENSSTOG00000029194 T311155_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Trp73
M03438_2.00 		Mus musculus
DRCAWGTYNNRACAYGYH
DRCRTGTYNNRACWTGYH		 SELEX
Jolma et al.(2013)
Tp73_1 		0.980 0.980
TP73
M08035_2.00 		Homo sapiens
RCADGYHSDGRCWDG
CHWGYCHSDRCHTGY		 ChIP-seq
Chen et al.(2011)
GSE15704_TP73_rapamycin 		0.980 0.980
TP73
M08036_2.00 		Homo sapiens
DRRCAWGYHCWGRCWTGYH
DRCAWGYCWGDRCWTGYYH		 ChIP-seq
Chen et al.(2011)
GSE15704_TP73_vehicle 		0.980 0.980
TP73
M08037_2.00 		Homo sapiens
RCMDGYBCHNDCHKG
CMDGHNDGVRCHKGY		 ChIP-seq
Chen et al.(2011)
GSE18650_TP73 		0.980 0.980
TP73
M09336_2.00 		Homo sapiens
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN		 Misc
Kulakovskiy et al.(2013)
P73_HUMAN.H11MO.0.A 		0.980 0.980
Trp73
M09339_2.00 		Mus musculus
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN		 Misc
Kulakovskiy et al.(2013)
P73_MOUSE.H11MO.0.B 		0.980 0.980
TP73
M11196_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P73_Q6 		0.980 0.980
Trp63
M09338_2.00 		Mus musculus
DRCAWGYHCHRRCHTGYHN
NDRCADGYYDGDRCWTGYH		 Misc
Kulakovskiy et al.(2013)
P63_MOUSE.H11MO.0.B 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000022492 p53 60 256

Links

Other p53 family TFs
Other Ictidomys tridecemlineatus TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA003304 Oryza indica BGIOSGA003304 N
GRMZM5G839969 Zea mays GRMZM5G839969 N
GRMZM5G853066 Zea mays GRMZM5G853066 N
GSMUA_Achr3G08500_001 Musa acuminata GSMUA_Achr3G08500_001 N
GSMUA_AchrUn_randomG17230_001 Musa acuminata GSMUA_AchrUn_randomG17230_001 N
LPERR02G10380 Leersia perrieri LPERR02G10380 N
OB01G21750 Oryza brachyantha OB01G21750 N
OB03G33030 Oryza brachyantha OB03G33030 N
OGLUM01G13490 Oryza glumaepatula OGLUM01G13490 N
ONIVA01G14280 Oryza nivara ONIVA01G14280 N
OPUNC01G11730 Oryza punctata OPUNC01G11730 N
ORGLA01G0101700 Oryza glaberrima ORGLA01G0101700 N
ORUFI01G13020 Oryza rufipogon ORUFI01G13020 N
Pavir.Ib03850 Panicum virgatum Pavir.Ib03850 N
Pavir.J14267 Panicum virgatum Pavir.J14267 N
Si019470m.g Setaria italica Si019470m.g N