CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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rps13
(
Ciona intestinalis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00292 (PAX)
IPR001523
ENSCING00000018058
T311591_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCINP00000033191
Paired box
27
98
KLSSEDVKEQIYKLAKKGLRPSQIGVILRDSHGVAQVRFVTGNQILRVLKAKGLAPDLPEDIYHLIKKAVAM
Links
Other
Paired box
family TFs
Other
Ciona intestinalis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0001009501
Angiostrongylus cantonensis
ACAC_0001009501
N
0.736
ACOC_0000845101
Angiostrongylus costaricensis
ACOC_0000845101
N
0.722
ANCCAN_06410
Ancylostoma caninum
ANCCAN_06410
N
ANCCEY_10735
Ancylostoma ceylanicum
ANCCEY_10735
N
ANCDUO_14679
Ancylostoma duodenale
ANCDUO_14679
N
CBG19687
Caenorhabditis briggsae
CBG19687
N
CBN07460
Caenorhabditis brenneri
CBN07460
N
CJA02893
Caenorhabditis japonica
CJA02893
N
CRE03166
Caenorhabditis remanei
CRE03166
N
DICVIV_11664
Dictyocaulus viviparus
DICVIV_11664
N
genemark-nMf.1.1.scaf00604-processed-gene-0.10
Meloidogyne floridensis
genemark-nMf.1.1.scaf00604-processed-gene-0.10
N
GPLIN_000355200
Globodera pallida
GPLIN_000355200
N
HCOI00506400
Haemonchus contortus
HCOI00506400
N
HCOI00608900
Haemonchus contortus
HCOI00608900
N
HPBE_0000407401
Heligmosomoides bakeri
HPBE_0000407401
N
L596_g26620
Steinernema carpocapsae
L596_g26620
N
L889_g15825
Steinernema feltiae
L889_g15825
N
0.722
L892_g25366
Steinernema scapterisci
L892_g25366
N
MhA1_Contig239.frz3.gene35
Meloidogyne hapla
MhA1_Contig239.frz3.gene35
N
Minc00512
Meloidogyne incognita
Minc00512
N
NBR_0001294901
Nippostrongylus brasiliensis
NBR_0001294901
N
0.707
NECAME_16739
Necator americanus
NECAME_16739
N
OESDEN_19099
Oesophagostomum dentatum
OESDEN_19099
N
TELCIR_08212
Teladorsagia circumcincta
TELCIR_08212
N
TELCIR_25960
Teladorsagia circumcincta
TELCIR_25960
N
rps-13
Caenorhabditis elegans
WBGene00004482
N