ENSONIG00000016552 (Oreochromis niloticus)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSONIG00000016552 T317379_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFATC2
M02441_2.00 		Homo sapiens
WNTTTCCRHN
NDYGGAAANW		 PBM
Weirauch et al.(2014)
pTH9196 		0.888 0.888
NFATC2
M05705_2.00 		Homo sapiens
DTTTCCATGGAAAM
KTTTCCATGGAAAH		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1 		0.888 0.888
NFATC2
M05706_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2 		0.888 0.888
NFATC2
M09346_2.00 		Homo sapiens
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B 		0.888 0.888
Nfatc2
M09357_2.00 		Mus musculus
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C 		0.888 0.888
NFATC2
M11221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q4 		0.888 0.888
NFATC2
M11222_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q5 		0.888 0.888
NFATC2
M11223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q6 		0.888 0.888
NFATC2
M08462_2.00 		Homo sapiens
TTTTCCA
TGGAAAA		 COMPILED
Mathelier et al.(2014)
MA0152.1 		0.888 0.888
NFATC2
M05707_2.00 		Homo sapiens
NTTTCCGCGGAAAN
NTTTCCGCGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1 		0.888 0.888
NFATC2
M05708_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2 		0.888 0.888
Nfatc1
M09360_2.00 		Mus musculus
KABTCANWBTTTCCW
WGGAAAVWNTGAVTM		 Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A 		0.846 0.846
NFATC1
M02443_2.00 		Meleagris gallopavo
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8315 		0.832 0.832
nfatc1
M02446_2.00 		Xenopus tropicalis
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8557 		0.832 0.832
ENSTNIG00000018271
M02445_2.00 		Tetraodon nigroviridis
DNDTTCCRNN
NNYGGAAHNH		 PBM
Weirauch et al.(2014)
pTH9005 		0.825 0.825
NFATC1
M02444_2.00 		Monodelphis domestica
NNDTTCCDNN
NNHGGAAHNN		 PBM
Weirauch et al.(2014)
pTH8401 		0.818 0.818
NFATC3
M02440_2.00 		Homo sapiens
DNTTTCCRNN
NNYGGAAANH		 PBM
Weirauch et al.(2014)
pTH9192 		0.804 0.804
NFATC3
M05693_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1 		0.804 0.804
NFATC3
M05694_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2 		0.804 0.804
NFATC3
M05695_2.00 		Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3 		0.804 0.804
NFATC3
M09343_2.00 		Homo sapiens
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B 		0.804 0.804
Nfatc3
M09359_2.00 		Mus musculus
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B 		0.804 0.804
NFATC3
M11217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q3 		0.804 0.804
NFATC3
M11218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q5 		0.804 0.804
NFATC3
M05696_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1 		0.804 0.804
NFATC3
M05697_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2 		0.804 0.804
NFATC3
M05698_2.00 		Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3 		0.804 0.804
NFATC1
M03449_2.00 		Homo sapiens
HKGRAAADDNWBTTTCCAYN
NRTGGAAAVWNHHTTTYCMD		 SELEX
Jolma et al.(2013)
NFATC1_1 		0.783 0.783
NFATC1
M03450_2.00 		Homo sapiens
TTTCCAYWRYGGAAA
TTTCCRYWRTGGAAA		 SELEX
Jolma et al.(2013)
NFATC1_2 		0.783 0.783
NFATC1
M03451_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Jolma et al.(2013)
NFATC1_3 		0.783 0.783
NFATC1
M02747_2.00 		Homo sapiens
DTTCCRYGGAA
TTCCRYGGAAH		 SELEX
Jolma et al.(2010)
NFATc1_dimer 		0.783 0.783
NFATC1
M02748_2.00 		Homo sapiens
GGAANDTTCC
GGAAHNTTCC		 SELEX
Jolma et al.(2010)
NFATc1_dimer_type2 		0.783 0.783
NFATC1
M02749_2.00 		Homo sapiens
WDTTTCCAY
RTGGAAAHW		 SELEX
Jolma et al.(2010)
NFATc1_monomer 		0.783 0.783
NFATC1
M05711_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1 		0.783 0.783
NFATC1
M05712_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2 		0.783 0.783
NFATC1
M09349_2.00 		Homo sapiens
HBYHWBWBTTTCCWB
VWGGAAAVWVWDRVD		 Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B 		0.783 0.783
NFATC1
M09625_2.00 		Homo sapiens
WBTTTCCAYY
RRTGGAAAVW		 Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al. 		0.783 0.783
NFATC1
M11232_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q4 		0.783 0.783
NFATC1
M11233_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5_01 		0.783 0.783
NFATC1
M11234_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5 		0.783 0.783
NFATC1
M05713_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1 		0.783 0.783
NFATC1
M05714_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2 		0.783 0.783
NFATC4
M01306_2.00 		Homo sapiens
NNNWWWVYRN
NYRBWWWNNN		 PBM
Lambert et al.(2019)
pTH9347 		0.776 0.776
NFATC4
M05701_2.00 		Homo sapiens
DBTTTCCRYN
NRYGGAAAVH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1 		0.776 0.776
NFATC4
M05702_2.00 		Homo sapiens
NKTTCCATGGAAMV
BKTTCCATGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2 		0.776 0.776
NFATC4
M09345_2.00 		Homo sapiens
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C 		0.776 0.776
Nfatc4
M09354_2.00 		Mus musculus
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C 		0.776 0.776
NFATC4
M11219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3_01 		0.776 0.776
NFATC4
M11220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3 		0.776 0.776
NFATC4
M05703_2.00 		Homo sapiens
DNTTTCCRYN
NRYGGAAANH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1 		0.776 0.776
NFATC4
M05704_2.00 		Homo sapiens
NKTTCCRYGGAAMN
NKTTCCRYGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2 		0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000020846 Rel 375 535
ENSONIP00000020847 Rel 375 535

Links

Other Rel family TFs
Other Oreochromis niloticus TFs

250 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29794.m003323 Ricinus communis 29794.m003323 N 0.000
29912.m005322 Ricinus communis 29912.m005322 N 0.000
AMTR_s00064p00107710 Amborella trichopoda AMTR_s00064p00107710 N 0.000
Aquca_020_00467 Aquilegia coerulea Aquca_020_00467 N 0.000
GATA22 Arabidopsis thaliana AT4G26150 N 0.000
GATA21 Arabidopsis thaliana AT5G56860 N 0.000
BGIOSGA006859 Oryza indica BGIOSGA006859 N 0.000
BGIOSGA023117 Oryza indica BGIOSGA023117 N 0.000
BGIOSGA023119 Oryza indica BGIOSGA023119 N 0.000
Bo1g042950 Brassica oleracea Bo1g042950 N 0.000
Bo2g033970 Brassica oleracea Bo2g033970 N 0.000
Bo3g019610 Brassica oleracea Bo3g019610 I 0.000
Bo7g110740 Brassica oleracea Bo7g110740 N 0.000
Bo9g127360 Brassica oleracea Bo9g127360 N 0.000
Bostr.26833s0575 Boechera stricta Bostr.26833s0575 N 0.000
Bostr.7867s0434 Boechera stricta Bostr.7867s0434 N 0.000
Bra002788 Brassica rapa Bra002788 N 0.000
Bra006851 Brassica rapa Bra006851 I 0.000
Bra019118 Brassica rapa Bra019118 N 0.000
Bra026461 Brassica rapa Bra026461 N 0.000
Bra035633 Brassica rapa Bra035633 N 0.000
BRADI1G37480 Brachypodium distachyon BRADI1G37480 N 0.000
BRADI3G08240 Brachypodium distachyon BRADI3G08240 N 0.000
Cagra.3467s0056 Capsella grandiflora Cagra.3467s0056 N 0.000
Cagra.4138s0005 Capsella grandiflora Cagra.4138s0005 N 0.000
Carubv10005113m.g Capsella rubella Carubv10005113m.g N 0.000
Carubv10026556m.g Capsella rubella Carubv10026556m.g N 0.000
cassava32152.m1 Manihot esculenta cassava32152.m1 N 0.000
cassava33236.m1 Manihot esculenta cassava33236.m1 N 0.000
cassava43851.valid.m1 Manihot esculenta cassava43851.valid.m1 N 0.000
chr4.CM0244.740.nd Lotus japonicus chr4.CM0244.740.nd N 0.000
chr5.CM0019.380.nc Lotus japonicus chr5.CM0019.380.nc N 0.000
Ciclev10008943m.g Citrus clementina Ciclev10008943m.g N 0.000
Ciclev10008968m.g Citrus clementina Ciclev10008968m.g N 0.000
Ciclev10009004m.g Citrus clementina Ciclev10009004m.g N 0.000
Cla021191 Citrullus lanatus Cla021191 N 0.000
Cucsa.353330 Cucumis sativus Cucsa.353330 N 0.000
Cucsa.397360 Cucumis sativus Cucsa.397360 N 0.000
Eucgr.C03048 Eucalyptus grandis Eucgr.C03048 N 0.000
Eucgr.C03895 Eucalyptus grandis Eucgr.C03895 N 0.000
evm.TU.supercontig_93.28 Carica papaya evm.TU.supercontig_93.28 N 0.000
CGA1 Arabidopsis lyrata fgenesh2_kg.7__1630__AT4G26150.1 N 0.000
GNC Arabidopsis lyrata fgenesh2_kg.8__1592__AT5G56860.1 N 0.000
gene02686-v1.0-hybrid Fragaria vesca gene02686-v1.0-hybrid N 0.000
gene12624-v1.0-hybrid Fragaria vesca gene12624-v1.0-hybrid N 0.000
GLYMA04G05431 Glycine max GLYMA04G05431 N 0.000
GLYMA13G00200 Glycine max GLYMA13G00200 N 0.000
GLYMA14G10830 Glycine max GLYMA14G10830 N 0.000
GLYMA15G18380 Glycine max GLYMA15G18380 N 0.000
GLYMA17G06290 Glycine max GLYMA17G06290 N 0.000
GLYMA17G34670 Glycine max GLYMA17G34670 N 0.000
Gorai.009G031400 Gossypium raimondii Gorai.009G031400 N 0.000
Gorai.009G045000 Gossypium raimondii Gorai.009G045000 N 0.000
Gorai.010G082800 Gossypium raimondii Gorai.010G082800 N 0.000
Gorai.010G101100 Gossypium raimondii Gorai.010G101100 N 0.000
GRMZM2G031983 Zea mays GRMZM2G031983 N 0.000
GRMZM2G039586 Zea mays GRMZM2G039586 N 0.000
GSMUA_Achr10G27510_001 Musa acuminata GSMUA_Achr10G27510_001 N 0.000
GSMUA_Achr2G16730_001 Musa acuminata GSMUA_Achr2G16730_001 I 0.000
GSMUA_Achr4G30820_001 Musa acuminata GSMUA_Achr4G30820_001 N 0.000
GSMUA_Achr7G09030_001 Musa acuminata GSMUA_Achr7G09030_001 I 0.000
GSMUA_Achr8G24880_001 Musa acuminata GSMUA_Achr8G24880_001 N 0.000
LPERR02G07780 Leersia perrieri LPERR02G07780 N 0.000
LPERR06G15680 Leersia perrieri LPERR06G15680 N 0.000
Lus10029863.g Linum usitatissimum Lus10029863.g N 0.000
MDP0000131803 Malus domestica MDP0000131803 N 0.000
MDP0000190038 Malus domestica MDP0000190038 N 0.000
MDP0000237740 Malus domestica MDP0000237740 N 0.000
MDP0000309902 Malus domestica MDP0000309902 I 0.000
MDP0000739900 Malus domestica MDP0000739900 N 0.000
mgf025842m Mimulus guttatus mgf025842m N 0.000
MLOC_10364 Hordeum vulgare MLOC_10364 N 0.000
MLOC_70809 Hordeum vulgare MLOC_70809 N 0.000
MTR_1g016170 Medicago truncatula MTR_1g016170 N 0.000
MTR_2g038720 Medicago truncatula MTR_2g038720 N 0.000
MTR_4g126350 Medicago truncatula MTR_4g126350 N 0.000
OB02G18010 Oryza brachyantha OB02G18010 N 0.000
OB06G26630 Oryza brachyantha OB06G26630 N 0.000
OBART02G08990 Oryza barthii OBART02G08990 N 0.000
OBART06G19060 Oryza barthii OBART06G19060 N 0.000
OGLUM02G09200 Oryza glumaepatula OGLUM02G09200 N 0.000
OGLUM06G20240 Oryza glumaepatula OGLUM06G20240 N 0.000
OMERI02G10250 Oryza meridionalis OMERI02G10250 N 0.000
ONIVA06G22870 Oryza nivara ONIVA06G22870 N 0.000
ONIVA11G03260 Oryza nivara ONIVA11G03260 N 0.000
OPUNC02G08040 Oryza punctata OPUNC02G08040 N 0.000
OPUNC06G17260 Oryza punctata OPUNC06G17260 N 0.000
orange1.1g020987m.g Citrus sinensis orange1.1g020987m.g N 0.000
orange1.1g021329m.g Citrus sinensis orange1.1g021329m.g N 0.000
orange1.1g021859m.g Citrus sinensis orange1.1g021859m.g N 0.000
ORGLA06G0158200 Oryza glaberrima ORGLA06G0158200 N 0.000
ORUFI02G09020 Oryza rufipogon ORUFI02G09020 N 0.000
ORUFI06G20160 Oryza rufipogon ORUFI06G20160 N 0.000
OS02G0220400 Oryza sativa OS02G0220400 N 0.000
OS06G0571800 Oryza sativa OS06G0571800 N 0.000
Pavir.Aa02907 Panicum virgatum Pavir.Aa02907 N 0.000
Pavir.Ab00790 Panicum virgatum Pavir.Ab00790 N 0.000
Pavir.Da00760 Panicum virgatum Pavir.Da00760 N 0.000
Pavir.Db01250 Panicum virgatum Pavir.Db01250 N 0.000
PGSC0003DMG400000280 Solanum tuberosum PGSC0003DMG400000280 N 0.000
PGSC0003DMG400002337 Solanum tuberosum PGSC0003DMG400002337 I 0.000
PGSC0003DMG400004493 Solanum tuberosum PGSC0003DMG400004493 N 0.000
PK07593.1 Cannabis sativa PK07593.1 N 0.000
PK21934.1 Cannabis sativa PK21934.1 I 0.000
Pm005502 Prunus mume Pm005502 N 0.000
Pm027164 Prunus mume Pm027164 N 0.000
POPTR_0006s24560 Populus trichocarpa POPTR_0006s24560 N 0.000
POPTR_0018s05160 Populus trichocarpa POPTR_0018s05160 N 0.000
PRUPE_ppa018120mg Prunus persica PRUPE_ppa018120mg N 0.000
PRUPE_ppa024374mg Prunus persica PRUPE_ppa024374mg N 0.000
SapurV1A.0086s0290 Salix purpurea SapurV1A.0086s0290 N 0.000
Sb04g007750 Sorghum bicolor Sb04g007750 N 0.000
Sb10g022580 Sorghum bicolor Sb10g022580 N 0.000
Si006733m.g Setaria italica Si006733m.g N 0.000
Si019058m.g Setaria italica Si019058m.g N 0.000
Solyc07g038160.2 Solanum lycopersicum Solyc07g038160.2 N 0.000
Solyc12g008830.1 Solanum lycopersicum Solyc12g008830.1 N 0.000
TCM_037285 Theobroma cacao TCM_037285 N 0.000
TCM_037666 Theobroma cacao TCM_037666 N 0.000
Thhalv10013793m.g Eutrema salsugineum Thhalv10013793m.g N 0.000
Thhalv10025461m.g Eutrema salsugineum Thhalv10025461m.g N 0.000
Traes_6AS_1BF082306 Triticum aestivum Traes_6AS_1BF082306 N 0.000
Traes_6AS_1BF0823061 Triticum aestivum Traes_6AS_1BF0823061 N 0.000
Traes_6BS_4EA352A7A Triticum aestivum Traes_6BS_4EA352A7A N 0.000
Traes_6DS_77038429A Triticum aestivum Traes_6DS_77038429A N 0.000
Traes_7BL_86BB5C61E Triticum aestivum Traes_7BL_86BB5C61E N 0.000
Traes_7DL_BFADB408C Triticum aestivum Traes_7DL_BFADB408C N 0.000
VIT_04s0008g01290 Vitis vinifera VIT_04s0008g01290 N 0.000
VIT_11s0016g02210 Vitis vinifera VIT_11s0016g02210 N 0.000