NFI (Anopheles gambiae)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 AGAP000068 T324372_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NfI
M03968_2.00 		Drosophila melanogaster
YTGGCDNNNHGCCAR
YTGGCDNNNHGCCAR		 SELEX
Nitta et al.(2015)
NfI_1 		0.813 0.813
NFIC
M05745_2.00 		Homo sapiens
NTTGGCNNNNTGCCARN
NYTGGCANNNNGCCAAN		 SELEX
Yin et al.(2017)
NFIC_FL_HT-SELEX 		0.758 0.758
NFIC
M08164_2.00 		Homo sapiens
NNCTTGGCANN
NNTGCCAAGNN		 ChIP-seq
Mathelier et al.(2014)
MA0161.2 		0.758 0.758
NFIC
M09378_2.00 		Homo sapiens
BYTGGMHBYNDKCCMRV
BYKGGMHNRVDKCCARV		 Misc
Kulakovskiy et al.(2013)
NFIC_HUMAN.H11MO.0.A 		0.758 0.758
NFIC
M09635_2.00 		Homo sapiens
BYTGSCAV
BTGSCARV		 Misc
Heinz et al.(2010)
LNCaP-NF1_Unpublished 		0.758 0.758
NFIC
M09636_2.00 		Homo sapiens
BYTGGCHNNNDGCCAR
YTGGCHNNNDGCCARV		 Misc
Heinz et al.(2010)
LNCAP-NF1_Unpublished 		0.758 0.758
NFIC
M11278_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CTF1_01 		0.758 0.758
NFIC
M11279_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1C_Q6 		0.758 0.758
NFIC
M05746_2.00 		Homo sapiens
NYTGGCNNNNYGCCARN
NYTGGCRNNNNGCCARN		 SELEX
Yin et al.(2017)
NFIC_FL_Methyl-HT-SELEX 		0.758 0.758
Nfic
M09385_2.00 		Mus musculus
NBYTGGCWN
NWGCCARVN		 Misc
Kulakovskiy et al.(2013)
NFIC_MOUSE.H11MO.0.A 		0.747 0.747
NFIX
M03475_2.00 		Homo sapiens
YTGGCNNNNTGCCAA
TTGGCANNNNGCCAR		 SELEX
Jolma et al.(2013)
NFIX_1 		0.714 0.714
NFIX
M03476_2.00 		Homo sapiens
NYTGGCDNN
NNHGCCARN		 SELEX
Jolma et al.(2013)
NFIX_2 		0.714 0.714
NFIX
M03477_2.00 		Homo sapiens
NYTGGCWNN
NNWGCCARN		 SELEX
Jolma et al.(2013)
NFIX_3 		0.714 0.714
NFIX
M03478_2.00 		Homo sapiens
TTGGCANNNTGCCAR
YTGGCANNNTGCCAA		 SELEX
Jolma et al.(2013)
NFIX_4 		0.714 0.714
NFIX
M05741_2.00 		Homo sapiens
NHTGGCDNNNTGCCADN
NHTGGCANNNHGCCADN		 SELEX
Yin et al.(2017)
NFIX_FL_HT-SELEX 		0.714 0.714
NFIX
M05742_2.00 		Homo sapiens
NYTGGCDNNNTGCCARN
NYTGGCANNNHGCCARN		 SELEX
Yin et al.(2017)
NFIX_FL_Methyl-HT-SELEX 		0.714 0.714
NFIA
M03480_2.00 		Homo sapiens
YTGGCANNNTGCCAA
TTGGCANNNTGCCAR		 SELEX
Jolma et al.(2013)
NFIA_1 		0.703 0.703
NFIA
M03481_2.00 		Homo sapiens
NNTGCCAANN
NNTTGGCANN		 SELEX
Jolma et al.(2013)
NFIA_2 		0.703 0.703
NFIA
M09379_2.00 		Homo sapiens
YTGGCWNYNDGCCAD
HTGGCHNRNWGCCAR		 Misc
Kulakovskiy et al.(2013)
NFIA_HUMAN.H11MO.0.C 		0.703 0.703
Nfia
M09383_2.00 		Mus musculus
YTGGCWNYNDGCCAD
HTGGCHNRNWGCCAR		 Misc
Kulakovskiy et al.(2013)
NFIA_MOUSE.H11MO.0.C 		0.703 0.703
NFIA
M11282_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1A_Q6_01 		0.703 0.703
Nfia
M11291_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFIA_02 		0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AGAP000068-PA SMAD 75 179

Links

Other SMAD family TFs
Other Anopheles gambiae TFs

264 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_017_00010 Aquilegia coerulea Aquca_017_00010 N
ANAC13 Arabidopsis thaliana AT1G32870 D
Bo7g057730 Brassica oleracea Bo7g057730 I
Bostr.3359s0074 Boechera stricta Bostr.3359s0074 I
Cagra.1443s0015 Capsella grandiflora Cagra.1443s0015 I
cassava22173.valid.m1 Manihot esculenta cassava22173.valid.m1 I
Ca_04337 Cicer arietinum Ca_04337 N
Ciclev10000612m.g Citrus clementina Ciclev10000612m.g I
Cla013854 Citrullus lanatus Cla013854 I
Cla016588 Citrullus lanatus Cla016588 N
Cucsa.364130 Cucumis sativus Cucsa.364130 N
Eucgr.F02771 Eucalyptus grandis Eucgr.F02771 N
evm.TU.supercontig_26.135 Carica papaya evm.TU.supercontig_26.135 I
ANAC13 Arabidopsis lyrata fgenesh2_kg.1__3425__AT1G32870.2 I
gene27539-v1.0-hybrid Fragaria vesca gene27539-v1.0-hybrid N
GLYMA10G36360 Glycine max GLYMA10G36360 N
GLYMA20G31210 Glycine max GLYMA20G31210 N
Gorai.005G076200 Gossypium raimondii Gorai.005G076200 I
Gorai.009G260000 Gossypium raimondii Gorai.009G260000 I
LjSGA_007769.1 Lotus japonicus LjSGA_007769.1 N
Lus10028713.g Linum usitatissimum Lus10028713.g I
MDP0000146969 Malus domestica MDP0000146969 I
MDP0000169485 Malus domestica MDP0000169485 I
MDP0000852271 Malus domestica MDP0000852271 I
mg018130m Mimulus guttatus mg018130m I
MTR_1g097300 Medicago truncatula MTR_1g097300 N
PGSC0003DMG400031149 Solanum tuberosum PGSC0003DMG400031149 I
Pm022358 Prunus mume Pm022358 N
POPTR_0002s06210 Populus trichocarpa POPTR_0002s06210 I
POPTR_0005s22180 Populus trichocarpa POPTR_0005s22180 I
PRUPE_ppa003410mg Prunus persica PRUPE_ppa003410mg N
SapurV1A.0134s0420 Salix purpurea SapurV1A.0134s0420 I
SapurV1A.0348s0040 Salix purpurea SapurV1A.0348s0040 I
Solyc04g072220.2 Solanum lycopersicum Solyc04g072220.2 I
Solyc12g056790.1 Solanum lycopersicum Solyc12g056790.1 I
TCM_036587 Theobroma cacao TCM_036587 I
VIT_18s0001g01820 Vitis vinifera VIT_18s0001g01820 I