fgenesh1_pg.C_scaffold_11000089 (Sporobolomyces roseus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh1_pg.C_scaffold_11000089 T334100_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_11000089 Sox 1049 1064
fgenesh1_pg.C_scaffold_11000089 Sox 1088 1133

Links

Other Sox family TFs
Other Sporobolomyces roseus TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1Q1_02593 Trichosporon asahii A1Q1_02593 N 0.524
AWRI1499_2837 Brettanomyces bruxellensis AWRI1499_2837 N 0.473
BGIBMGA006156 Bombyx mori BGIBMGA006156 N 0.539
BN7_5943 Wickerhamomyces ciferrii BN7_5943 N 0.456
CC1G_07855 Coprinopsis cinerea CC1G_07855 N 0.486
CMQ_7998 Grosmannia clavigera CMQ_7998 N 0.501
TCF7L2 Tursiops truncatus ENSTTRG00000002360 N 0.439
estExt_fgeneshTM_pg.C_10542 Tremella mesenterica estExt_fgeneshTM_pg.C_10542 N 0.436
estExt_Genewise1.C_120062 Heterobasidion annosum estExt_Genewise1.C_120062 N 0.565
EVEC_0001251901 Enterobius vermicularis EVEC_0001251901 N 0.489
GLOINDRAFT_9339 Rhizophagus irregularis GLOINDRAFT_9339 N 0.568
GPLIN_000170600 Globodera pallida GPLIN_000170600 N 0.451
HelroG178674 Helobdella robusta HelroG178674 N 0.429
HETIRDRAFT_460226 Heterobasidion irregulare HETIRDRAFT_460226 N 0.565
HPODL_02662 Ogataea parapolymorpha HPODL_02662 N 0.544
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.553
K437DRAFT_266676 Tilletiaria anomala K437DRAFT_266676 N 0.508
K437DRAFT_66818 Tilletiaria anomala K437DRAFT_66818 N 0.491
KLLA0_B11495g Kluyveromyces lactis KLLA0_B11495g N 0.470
KUCA_T00004799001 Kuraishia capsulata KUCA_T00004799001 N 0.504
Kwal_9519 Kluyveromyces waltii Kwal_9519 N 0.478
LALA0_S01e08702g Lachancea lanzarotensis LALA0_S01e08702g N 0.502
LALA0_S10e00254g Lachancea lanzarotensis LALA0_S10e00254g N 0.514
M378DRAFT_41557 Amanita muscaria M378DRAFT_41557 N 0.460
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.582
MAC_03708 Metarhizium acridum MAC_03708 N 0.436
MAJ_01270 Metarhizium majus MAJ_01270 N 0.436
MAM_02299 Metarhizium album MAM_02299 N 0.416
MBR_01289 Metarhizium brunneum MBR_01289 N 0.445
MCOS_0000664501 Mesocestoides corti MCOS_0000664501 N 0.474
Moror_8439 Moniliophthora roreri Moror_8439 N 0.624
MPER_12197 Moniliophthora perniciosa MPER_12197 N 0.601
MVLG_01553 Microbotryum violaceum MVLG_01553 N 0.689
PAS_chr1-1_0442 Komagataella pastoris PAS_chr1-1_0442 N 0.471
PAS_chr3_1149 Komagataella pastoris PAS_chr3_1149 N 0.554
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N 0.460
RHTO_04537 Rhodosporidium toruloides RHTO_04537 N 0.708
S40285_05706 Stachybotrys chlorohalonata S40285_05706 N 0.423
SAKL0C03872g Lachancea kluyveri SAKL0C03872g N 0.610
SAKL0C03916g Lachancea kluyveri SAKL0C03916g N 0.610
SAKL0C10648g Lachancea kluyveri SAKL0C10648g N 0.606
SAKL0D09922g Lachancea kluyveri SAKL0D09922g N 0.611
SAKL0H00726g Lachancea kluyveri SAKL0H00726g N 0.473
SCHCODRAFT_110960 Schizophyllum commune SCHCODRAFT_110960 N 0.480
SINV25043 Solenopsis invicta SINV25043 N 0.454
sr12520 Sporisorium reilianum sr12520 N 0.541
Thaps25909 Thalassiosira pseudonana Thaps25909 N 0.444
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.513
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.503
UM01457 Ustilago maydis UM01457 N 0.466
X797_001779 Metarhizium robertsii X797_001779 N 0.445
XP_002490100.1 Pichia pastoris XP_002490100.1 N 0.471
XP_002492281.1 Pichia pastoris XP_002492281.1 N 0.554