GPUH_0001544201 (Gongylonema pulchrum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 GPUH_0001544201 T336371_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GPUH_0001544201-mRNA-1 Sox 12 66
GPUH_0001544201-mRNA-1 Sox 84 152

Links

Other Sox family TFs
Other Gongylonema pulchrum TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0001052301 Angiostrongylus cantonensis ACAC_0001052301 N 0.521
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.603
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.551
ANCCEY_10333 Ancylostoma ceylanicum ANCCEY_10333 N 0.516
ASIM_0000048401 Anisakis simplex ASIM_0000048401 N 0.593
ASU_03902 Ascaris suum ASU_03902 N 0.624
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N 0.549
Bm4180 Brugia malayi Bm4180 N 0.620
BXY_1555400 Bursaphelenchus xylophilus BXY_1555400 N 0.471
BXY_1714600 Bursaphelenchus xylophilus BXY_1714600 N 0.426
CapteG158220 Capitella teleta CapteG158220 N 0.418
CBG17468 Caenorhabditis briggsae CBG17468 N 0.570
CBN17977 Caenorhabditis brenneri CBN17977 N 0.567
CGI_10023724 Crassostrea gigas CGI_10023724 N 0.442
CJA09678 Caenorhabditis japonica CJA09678 N 0.568
CJA42049 Caenorhabditis japonica CJA42049 N 0.599
CRE02943 Caenorhabditis remanei CRE02943 N 0.522
D917_01254 Trichinella nativa D917_01254 N 0.510
D917_08189 Trichinella nativa D917_08189 N 0.532
D918_07195 Trichuris suis D918_07195 N 0.557
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.610
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.620
EFV53345 Trichinella spiralis EFV53345 N 0.494
EFV57410 Trichinella spiralis EFV57410 N 0.510
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.624
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N 0.549
GPLIN_000727200 Globodera pallida GPLIN_000727200 N 0.485
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.607
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.603
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.618
L889_g13533 Steinernema feltiae L889_g13533 N 0.622
L892_g17551 Steinernema scapterisci L892_g17551 N 0.622
L893_g5947 Steinernema glaseri L893_g5947 N 0.622
LOAG_04936 Loa loa LOAG_04936 N 0.620
MhA1_Contig113.frz3.gene9 Meloidogyne hapla MhA1_Contig113.frz3.gene9 N 0.493
Minc01077 Meloidogyne incognita Minc01077 N 0.417
Minc03268 Meloidogyne incognita Minc03268 N 0.493
Minc08988 Meloidogyne incognita Minc08988 N 0.493
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.620
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.603
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.620
NECAME_09126 Necator americanus NECAME_09126 N 0.603
nLs.2.1.2.g00300 Litomosoides sigmodontis nLs.2.1.2.g00300 N 0.526
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N 0.534
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.624
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.592
PTRK_0000986200 Parastrongyloides trichosuri PTRK_0000986200 N 0.560
RSKR_0000605700 Rhabditophanes kr3021 RSKR_0000605700 N 0.544
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N 0.532
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.592
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.624
SPAL_0001030300 Strongyloides papillosus SPAL_0001030300 N 0.560
SSTP_0000371800 Strongyloides stercoralis SSTP_0000371800 N 0.560
SVE_0494300 Strongyloides venezuelensis SVE_0494300 N 0.560
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.624
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.624
TELCIR_06008 Teladorsagia circumcincta TELCIR_06008 N 0.533
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.603
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N 0.542
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.557
hmg-1.2 Caenorhabditis elegans WBGene00001972 N 0.563
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.620
WUBG_12099 Wuchereria bancrofti WUBG_12099 N 0.569