cassava16230.m1 (Manihot esculenta)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 cassava16230.m1 T344597_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.930 0.471
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.875 0.406
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.860 0.426
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava16230.m1 TCP 115 272

Links

Other TCP family TFs
Other Manihot esculenta TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB39329 Xenopus laevis AAB39329 I
Aan_R002236 Calypte anna Aan_R002236 I
Aan_R005610 Calypte anna Aan_R005610 I
ACEP23519 Atta cephalotes ACEP23519 I
ACEP23524 Atta cephalotes ACEP23524 I
ADIR005117 Anopheles dirus ADIR005117 I
Alligator_sinensis_CCG004626.1 Alligator sinensis Alligator_sinensis_CCG004626.1 I
Aqu1.222022 Amphimedon queenslandica Aqu1.222022 I
BGLB001215 Biomphalaria glabrata BGLB001215 I
BGLB010651 Biomphalaria glabrata BGLB010651 I
Brh_R001114 Buceros rhinoceros Brh_R001114 I
Brh_R001115 Buceros rhinoceros Brh_R001115 I
CapteG167863 Capitella teleta CapteG167863 I
CGI_10014747 Crassostrea gigas CGI_10014747 I
CGI_10017370 Crassostrea gigas CGI_10017370 I
CLEC004107 Cimex lectularius CLEC004107 I
Cmyd_10013581 Chelonia mydas Cmyd_10013581 I
CpipJ_CPIJ018354 Culex pipiens CpipJ_CPIJ018354 I
D917_04509 Trichinella nativa D917_04509 I
D918_06928 Trichuris suis D918_06928 I
D918_09504 Trichuris suis D918_09504 I
DAPPUDRAFT_300607 Daphnia pulex DAPPUDRAFT_300607 I
DAPPUDRAFT_314805 Daphnia pulex DAPPUDRAFT_314805 I
EFV60166 Trichinella spiralis EFV60166 I
ENSAMEG00000003318 Ailuropoda melanoleuca ENSAMEG00000003318 I
ENSAMEG00000014442 Ailuropoda melanoleuca ENSAMEG00000014442 I
ENSAMXG00000002880 Astyanax mexicanus ENSAMXG00000002880 I
ENSAPLG00000004964 Anas platyrhynchos ENSAPLG00000004964 I
ENSAPLG00000007006 Anas platyrhynchos ENSAPLG00000007006 I
ENSAPLG00000011496 Anas platyrhynchos ENSAPLG00000011496 I
SMAD9 Bos taurus ENSBTAG00000007589 I
SMAD3 Bos taurus ENSBTAG00000012599 I
ENSBTAP00000003668-D4 Bos grunniens ENSBTAP00000003668-D4 I
ENSBTAP00000029021-D3 Bos grunniens ENSBTAP00000029021-D3 I
SMAD9 Canis familiaris ENSCAFG00000006162 I
SMAD3 Canis familiaris ENSCAFG00000017388 I
SMAD3 Choloepus hoffmanni ENSCHOG00000001562 I
ENSCING00000006188 Ciona intestinalis ENSCING00000006188 I
SMAD3 Callithrix jacchus ENSCJAG00000002088 I
SMAD9 Cavia porcellus ENSCPOG00000010255 I
SMAD3 Cavia porcellus ENSCPOG00000021314 I
ENSCSAG00000013275 Chlorocebus sabaeus ENSCSAG00000013275 I
ENSCSAG00000017872 Chlorocebus sabaeus ENSCSAG00000017872 I
ENSCSAVG00000004749 Ciona savignyi ENSCSAVG00000004749 I
smad3b Danio rerio ENSDARG00000010207 I
smad3a Danio rerio ENSDARG00000036096 I
SMAD3 Dasypus novemcinctus ENSDNOG00000044090 I
SMAD9 Dasypus novemcinctus ENSDNOG00000048385 I
Smad9 Dipodomys ordii ENSDORG00000002526 I
Smad5 Dipodomys ordii ENSDORG00000004533 I
SMAD9 Equus caballus ENSECAG00000012534 I
SMAD3 Equus caballus ENSECAG00000020259 I
SMAD3 Echinops telfairi ENSETEG00000003356 I
ENSETEG00000017446 Echinops telfairi ENSETEG00000017446 I
SMAD9 Echinops telfairi ENSETEG00000020236 I
ENSFALG00000012861 Ficedula albicollis ENSFALG00000012861 I
SMAD9 Felis catus ENSFCAG00000003813 I
SMAD3 Felis catus ENSFCAG00000027081 I
SMAD9 Homo sapiens ENSG00000120693 D
SMAD3 Homo sapiens ENSG00000166949 D
SMAD1 Homo sapiens ENSG00000170365 D
smad3b Gasterosteus aculeatus ENSGACG00000005092 I
SMAD3 Gasterosteus aculeatus ENSGACG00000016882 I
ENSGACG00000017820 Gasterosteus aculeatus ENSGACG00000017820 I
ENSGALG00000007870 Gallus gallus ENSGALG00000007870 I
ENSGALG00000014184 Gallus gallus ENSGALG00000014184 I
SMAD9 Gorilla gorilla ENSGGOG00000001017 I
ENSGMOG00000001314 Gadus morhua ENSGMOG00000001314 I
ENSGMOG00000008364 Gadus morhua ENSGMOG00000008364 I
ENSLACG00000010552 Latimeria chalumnae ENSLACG00000010552 I
SMAD9 Loxodonta africana ENSLAFG00000002903 I
ENSLOCG00000013897 Lepisosteus oculatus ENSLOCG00000013897 I
ENSMEUG00000016668 Macropus eugenii ENSMEUG00000016668 I
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I
SMAD3 Meleagris gallopavo ENSMGAG00000009879 I
SMAD9 Microcebus murinus ENSMICG00000003343 I
SMAD3 Microcebus murinus ENSMICG00000006119 I
SMAD2 Microcebus murinus ENSMICG00000007882 I
SMAD9 Myotis lucifugus ENSMLUG00000006399 I
SMAD9 Macaca mulatta ENSMMUG00000009914 I
SMAD3 Macaca mulatta ENSMMUG00000015455 I
SMAD3 Monodelphis domestica ENSMODG00000009609 I
ENSMPUG00000001838 Mustela putorius furo ENSMPUG00000001838 I
Smad9 Mus musculus ENSMUSG00000027796 D
Smad3 Mus musculus ENSMUSG00000032402 D
ENSNLEG00000001639 Nomascus leucogenys ENSNLEG00000001639 I
ENSNLEG00000012983 Nomascus leucogenys ENSNLEG00000012983 I
ENSOARG00000018267 Ovis aries ENSOARG00000018267 I
ENSOARG00000018276 Ovis aries ENSOARG00000018276 I
SMAD9 Oryctolagus cuniculus ENSOCUG00000007453 I
SMAD9 Otolemur garnettii ENSOGAG00000002742 I
SMAD3 Otolemur garnettii ENSOGAG00000014217 I
ENSONIG00000004109 Oreochromis niloticus ENSONIG00000004109 I
ENSONIG00000013271 Oreochromis niloticus ENSONIG00000013271 I
ENSONIG00000015464 Oreochromis niloticus ENSONIG00000015464 I
SMAD9 Ochotona princeps ENSOPRG00000004923 I
SMAD3 Ochotona princeps ENSOPRG00000014996 I
smad3a Oryzias latipes ENSORLG00000002207 I
smad3b Oryzias latipes ENSORLG00000006803 I
ENSORLG00000011834 Oryzias latipes ENSORLG00000011834 I
ENSP00000332973 Macaca fascicularis ENSP00000332973 I
ENSP00000332973-D1 Bos grunniens ENSP00000332973-D1 I
ENSP00000382216 Macaca fascicularis ENSP00000382216 I
ENSPANG00000014460 Papio anubis ENSPANG00000014460 I
ENSPANG00000016627 Papio anubis ENSPANG00000016627 I
SMAD9 Procavia capensis ENSPCAG00000002604 I
SMAD3 Procavia capensis ENSPCAG00000008103 I
ENSPFOG00000002285 Poecilia formosa ENSPFOG00000002285 I
ENSPFOG00000004885 Poecilia formosa ENSPFOG00000004885 I
ENSPFOG00000006336 Poecilia formosa ENSPFOG00000006336 I
ENSPFOG00000008802 Poecilia formosa ENSPFOG00000008802 I
ENSPMAG00000000489 Petromyzon marinus ENSPMAG00000000489 I
ENSPMAG00000004234 Petromyzon marinus ENSPMAG00000004234 I
ENSPMAG00000009833 Petromyzon marinus ENSPMAG00000009833 I
ENSPPYG00000005285 Pongo abelii ENSPPYG00000005285 I
ENSPPYG00000006583 Pongo abelii ENSPPYG00000006583 I
ENSPSIG00000010579 Pelodiscus sinensis ENSPSIG00000010579 I
SMAD9 Pan troglodytes ENSPTRG00000005788 I
SMAD3 Pan troglodytes ENSPTRG00000007199 I
SMAD3 Pteropus vampyrus ENSPVAG00000002626 I
SMAD9 Pteropus vampyrus ENSPVAG00000013871 I
Smad9 Rattus norvegicus ENSRNOG00000000091 D
Smad3 Rattus norvegicus ENSRNOG00000008620 I
LOC103691556 Rattus norvegicus ENSRNOG00000058416 I
SMAD2 Sorex araneus ENSSARG00000003487 I
SMAD9 Sorex araneus ENSSARG00000011878 I
ENSSHAG00000012543 Sarcophilus harrisii ENSSHAG00000012543 I
SMAD9 Sus scrofa ENSSSCG00000009357 I
ENSSTOG00000003788 Ictidomys tridecemlineatus ENSSTOG00000003788 I
ENSSTOG00000007103 Ictidomys tridecemlineatus ENSSTOG00000007103 I
ENSSTOG00000010286 Ictidomys tridecemlineatus ENSSTOG00000010286 I
ENSTBEG00000003884 Tupaia belangeri ENSTBEG00000003884 I
SMAD9 Tupaia belangeri ENSTBEG00000011491 I
SMAD3 Taeniopygia guttata ENSTGUG00000009470 I
ENSTNIG00000004827 Tetraodon nigroviridis ENSTNIG00000004827 I
smad3b Tetraodon nigroviridis ENSTNIG00000008432 I
smad3a Tetraodon nigroviridis ENSTNIG00000009546 I
ENSTRUG00000002512 Takifugu rubripes ENSTRUG00000002512 I
smad3b Takifugu rubripes ENSTRUG00000014802 I
smad3a Takifugu rubripes ENSTRUG00000016858 I
ENSTSYG00000005021 Tarsius syrichta ENSTSYG00000005021 I
SMAD9 Tursiops truncatus ENSTTRG00000007903 I
ENSXMAG00000002377 Xiphophorus maculatus ENSXMAG00000002377 I
ENSXMAG00000003553 Xiphophorus maculatus ENSXMAG00000003553 I
ENSXMAG00000004505 Xiphophorus maculatus ENSXMAG00000004505 I
estExt_fgenesh2_pg.C_1720042 Branchiostoma floridae estExt_fgenesh2_pg.C_1720042 I
estExt_gwp.C_540260 Branchiostoma floridae estExt_gwp.C_540260 I
GB42213 Apis mellifera GB42213 N
Gfo_R000026 Geospiza fortis Gfo_R000026 I
Gfo_R005908 Geospiza fortis Gfo_R005908 I
Gfo_R012055 Geospiza fortis Gfo_R012055 I
HelroG185435 Helobdella robusta HelroG185435 I
HelroG186716 Helobdella robusta HelroG186716 I
ISCW001846 Ixodes scapularis ISCW001846 I
ISCW010869 Ixodes scapularis ISCW010869 I
L798_14024 Zootermopsis nevadensis L798_14024 I
LDEC015977 Leptinotarsa decemlineata LDEC015977 I
LotgiG104873 Lottia gigantea LotgiG104873 I
LotgiG189014 Lottia gigantea LotgiG189014 I
ML011743a Mnemiopsis leidyi ML011743a I
Myotis_brandtii_Smad3_10022298 Myotis brandtii Myotis_brandtii_Smad3_10022298 I
Myotis_brandtii_SMAD9_10010468 Myotis brandtii Myotis_brandtii_SMAD9_10010468 I
NEMVEDRAFT_v1g168041 Nematostella vectensis NEMVEDRAFT_v1g168041 I
NEMVEDRAFT_v1g228395 Nematostella vectensis NEMVEDRAFT_v1g228395 I
NV10880 Nasonia vitripennis NV10880 I
NV15769 Nasonia vitripennis NV15769 I
Ocbimv22002448m.g Octopus bimaculoides Ocbimv22002448m.g I
Ocbimv22036741m.g Octopus bimaculoides Ocbimv22036741m.g I
Ogr07749 Ophisaurus gracilis Ogr07749 I
Ogr07750 Ophisaurus gracilis Ogr07750 I
PHUM033930 Pediculus humanus PHUM033930 I
PPAI005080 Phlebotomus papatasi PPAI005080 I
Pvit_04529 Pogona vitticeps Pvit_04529 I
Sakowv30001252m.g Saccoglossus kowalevskii Sakowv30001252m.g I
Sakowv30032201m.g Saccoglossus kowalevskii Sakowv30032201m.g I
Sakowv30032220m.g Saccoglossus kowalevskii Sakowv30032220m.g I
SINV22770 Solenopsis invicta SINV22770 I
SINV22799 Solenopsis invicta SINV22799 I
SMAR008230 Strigamia maritima SMAR008230 I
SMAR012602 Strigamia maritima SMAR012602 I
SPU_017642 Strongylocentrotus purpuratus SPU_017642 I
SPU_020722 Strongylocentrotus purpuratus SPU_020722 I
SPU_023107 Strongylocentrotus purpuratus SPU_023107 I
Tal_R000062 Tyto alba Tal_R000062 I
Tal_R001210 Tyto alba Tal_R001210 I
Tal_R011237 Tyto alba Tal_R011237 I
TMUE_s0005013500 Trichuris muris TMUE_s0005013500 I
TriadG49742 Trichoplax adhaerens TriadG49742 I
TriadG50301 Trichoplax adhaerens TriadG50301 I
TTRE_0000192701 Trichuris trichiura TTRE_0000192701 I
TTRE_0000645601 Trichuris trichiura TTRE_0000645601 I
smad3 Xenopus tropicalis XB-GENE-481992 I
smad3.L Xenopus laevis XB-GENE-864816 I
smad2.S Xenopus laevis XB-GENE-864923 I
XP_002157279.1 Hydra magnipapillata XP_002157279.1 I
XP_002160208.1 Hydra magnipapillata XP_002160208.1 I