CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CADAORAG00003823
(
Aspergillus oryzae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CADAORAG00003823
T362105_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
vad-3
M02614_2.00
Neurospora crassa
NNNCGGCANWT
AWNTGCCGNNN
PBM
Weirauch et al.(2014)
pTH7811
0.635
0.949
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAORAP00003755
Zinc cluster
165
203
LACIACRRKKIRCSGEKPACKHCSRSRIPCVYKVTTRKA
Links
Other
Zinc cluster
family TFs
Other
Aspergillus oryzae
TFs
155 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29851.m002498
Ricinus communis
29851.m002498
I
0.000
VRN1
Arabidopsis thaliana
AT3G18990
D
0.000
Bo1g115980
Brassica oleracea
Bo1g115980
I
0.000
Bo3g071890
Brassica oleracea
Bo3g071890
I
0.000
Bo5g116790
Brassica oleracea
Bo5g116790
I
0.000
Bostr.19424s0762
Boechera stricta
Bostr.19424s0762
I
0.000
Bra037544
Brassica rapa
Bra037544
I
0.000
Cagra.5105s0003
Capsella grandiflora
Cagra.5105s0003
I
0.000
Carubv10015637m.g
Capsella rubella
Carubv10015637m.g
I
0.000
cassava29880.valid.m1
Manihot esculenta
cassava29880.valid.m1
I
0.000
Ciclev10028642m.g
Citrus clementina
Ciclev10028642m.g
I
0.000
evm.TU.supercontig_62.76
Carica papaya
evm.TU.supercontig_62.76
I
0.000
VRN1
Arabidopsis lyrata
fgenesh2_kg.3__2116__AT3G18990.1
I
0.000
gene31955-v1.0-hybrid
Fragaria vesca
gene31955-v1.0-hybrid
I
0.000
Gorai.002G006500
Gossypium raimondii
Gorai.002G006500
I
0.000
Gorai.005G240900
Gossypium raimondii
Gorai.005G240900
I
0.000
Gorai.012G150900
Gossypium raimondii
Gorai.012G150900
I
0.000
Gorai.013G040000
Gossypium raimondii
Gorai.013G040000
I
0.000
MDP0000555456
Malus domestica
MDP0000555456
N
0.000
orange1.1g016655m.g
Citrus sinensis
orange1.1g016655m.g
I
0.000
PK10791.1
Cannabis sativa
PK10791.1
I
0.000
Pm021537
Prunus mume
Pm021537
N
0.000
POPTR_0004s15400
Populus trichocarpa
POPTR_0004s15400
I
0.000
POPTR_0009s11170
Populus trichocarpa
POPTR_0009s11170
I
0.000
PRUPE_ppa006275mg
Prunus persica
PRUPE_ppa006275mg
I
0.000
SapurV1A.0090s0340
Salix purpurea
SapurV1A.0090s0340
I
0.000
SapurV1A.0979s0040
Salix purpurea
SapurV1A.0979s0040
I
0.000
SapurV1A.2089s0010
Salix purpurea
SapurV1A.2089s0010
I
0.000
TCM_006971
Theobroma cacao
TCM_006971
I
0.000
Thhalv10021075m.g
Eutrema salsugineum
Thhalv10021075m.g
I
0.000