CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGGC5_3739
(
Colletotrichum gloeosporioides
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CGGC5_3739
T363655_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_09147
M02574_2.00
Aspergillus nidulans
NNNNHCGGNN
NNCCGDNNNN
PBM
Weirauch et al.(2014)
pTH8347
0.562
0.789
NCU02525
M02596_2.00
Neurospora crassa
NNNNHCGGNN
NNCCGDNNNN
PBM
Weirauch et al.(2014)
pTH8964
0.554
0.737
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ELA36865
Zinc cluster
164
207
RACEACRGLKVRCEPDPNDAEGPCKRCKKAGRNCVVTMPTRKRQ
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum gloeosporioides
TFs
96 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA035741
Oryza indica
BGIOSGA035741
N
BRADI2G52227
Brachypodium distachyon
BRADI2G52227
N
BRADI4G09197
Brachypodium distachyon
BRADI4G09197
N
F775_17625
Aegilops tauschii
F775_17625
N
GRMZM2G159475
Zea mays
GRMZM2G159475
N
GRMZM2G163427
Zea mays
GRMZM2G163427
N
GRMZM5G868355
Zea mays
GRMZM5G868355
N
LPERR11G20420
Leersia perrieri
LPERR11G20420
N
MLOC_74705
Hordeum vulgare
MLOC_74705
N
OB11G28090
Oryza brachyantha
OB11G28090
N
OBART11G23660
Oryza barthii
OBART11G23660
N
OBART11G23670
Oryza barthii
OBART11G23670
N
ONIVA11G23190
Oryza nivara
ONIVA11G23190
N
OPUNC12G15050
Oryza punctata
OPUNC12G15050
N
ORGLA11G0190200
Oryza glaberrima
ORGLA11G0190200
N
ORGLA11G0190300
Oryza glaberrima
ORGLA11G0190300
N
ORUFI11G25540
Oryza rufipogon
ORUFI11G25540
N
ORUFI11G25550
Oryza rufipogon
ORUFI11G25550
N
Pavir.Ha00317
Panicum virgatum
Pavir.Ha00317
N
Pavir.Hb00044
Panicum virgatum
Pavir.Hb00044
N
Sb05g027740
Sorghum bicolor
Sb05g027740
N
Sb08g018940
Sorghum bicolor
Sb08g018940
N
Si025985m.g
Setaria italica
Si025985m.g
N
Traes_4AL_FF199F127
Triticum aestivum
Traes_4AL_FF199F127
N
Traes_4BS_A79538646
Triticum aestivum
Traes_4BS_A79538646
N
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
Traes_4DS_F8FC0C699
Triticum aestivum
Traes_4DS_F8FC0C699
N
TRIUR3_21532
Triticum urartu
TRIUR3_21532
N