CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
M408DRAFT_9264
(
Serendipita vermifera
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
M408DRAFT_9264
T372598_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM27565
Zinc cluster
43
84
SGCWTCRLRRKKCDENRRSDGTCDTCKRLRLQCLGWGAKRPE
Links
Other
Zinc cluster
family TFs
Other
Serendipita vermifera
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29820.m001008
Ricinus communis
29820.m001008
I
0.000
DREB2A
Arabidopsis thaliana
AT5G05410
D
0.000
Bo2g006960
Brassica oleracea
Bo2g006960
I
0.000
Bostr.13129s0423
Boechera stricta
Bostr.13129s0423
I
0.000
Bostr.19424s1037
Boechera stricta
Bostr.19424s1037
I
0.000
Bra005852
Brassica rapa
Bra005852
I
0.000
Bra028759
Brassica rapa
Bra028759
I
0.000
Cagra.1504s0045
Capsella grandiflora
Cagra.1504s0045
I
0.000
Cagra.1655s0066
Capsella grandiflora
Cagra.1655s0066
I
0.000
Cagra.7053s0020
Capsella grandiflora
Cagra.7053s0020
I
0.000
Carubv10001099m.g
Capsella rubella
Carubv10001099m.g
I
0.000
Carubv10013771m.g
Capsella rubella
Carubv10013771m.g
I
0.000
Carubv10023556m.g
Capsella rubella
Carubv10023556m.g
I
0.000
chr1.LjT01D01.90.nd
Lotus japonicus
chr1.LjT01D01.90.nd
I
0.000
DREB2B
Arabidopsis lyrata
fgenesh2_kg.3__1148__AT3G11020.1
I
0.000
DREB2A
Arabidopsis lyrata
fgenesh2_kg.6__469__AT5G05410.1
I
0.000
GLYMA07G19221
Glycine max
GLYMA07G19221
I
0.000
GLYMA18G43750
Glycine max
GLYMA18G43750
I
0.000
MTR_7g070220
Medicago truncatula
MTR_7g070220
I
0.000
PGSC0003DMG401023951
Solanum tuberosum
PGSC0003DMG401023951
I
0.000
Solyc06g050520.1
Solanum lycopersicum
Solyc06g050520.1
I
0.000
TCM_021596
Theobroma cacao
TCM_021596
I
0.000
Thhalv10021161m.g
Eutrema salsugineum
Thhalv10021161m.g
I
0.000