SMAC_03743 (Sordaria macrospora)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SMAC_03743 T383948_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU08658
M02628_2.00 		Neurospora crassa
NYCGGBWAN
NTWVCCGRN		 PBM
Weirauch et al.(2014)
pTH7896 		0.654 0.971
ANIA_00202
M01349_2.00 		Aspergillus nidulans
HBCGGNWWN
NWWNCCGVD		 PBM
Lambert et al.(2019)
pEX0397 		0.553 0.686
ANIA_06846
M01390_2.00 		Aspergillus nidulans
VTCGGYTA
TARCCGAB		 PBM
Lambert et al.(2019)
pEX0258 		0.543 0.457
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCC11037 Zinc cluster 158 192

Links

Other Zinc cluster family TFs
Other Sordaria macrospora TFs

206 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCR Arabidopsis thaliana AT3G54220 N 0.000
Bo8g083500 Brassica oleracea Bo8g083500 N 0.000
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.000
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.000
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.000
Ca_09530 Cicer arietinum Ca_09530 N 0.000
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.000
Cla012346 Citrullus lanatus Cla012346 N 0.000
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.000
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.000
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.000
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.000
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.000
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.000
LPERR11G01210 Leersia perrieri LPERR11G01210 N 0.000
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.000
mgf012242m Mimulus guttatus mgf012242m N 0.000
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.000
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.000
OMERI06G09050 Oryza meridionalis OMERI06G09050 N 0.000
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.000
PK17372.1 Cannabis sativa PK17372.1 N 0.000
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.000
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.000
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.000
Thhalv10023455m.g Eutrema salsugineum Thhalv10023455m.g N 0.000
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.000