AMTR_s00013p00252260 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00013p00252260 T000345_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN10055 AP2 139 187

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.150110 Cucumis sativus Cucsa.150110 N 0.770
Ciclev10021891m.g Citrus clementina Ciclev10021891m.g N 0.769
Carubv10005663m.g Capsella rubella Carubv10005663m.g N 0.719
Cagra.2997s0002 Capsella grandiflora Cagra.2997s0002 N 0.719
Bostr.2021s0045 Boechera stricta Bostr.2021s0045 N 0.719
mgf007349m Mimulus guttatus mgf007349m N 0.770
mgf003727m Mimulus guttatus mgf003727m N 0.691
mgf003491m Mimulus guttatus mgf003491m N 0.770
estExt_fgenesh1_pg.C_930051 Physcomitrella patens estExt_fgenesh1_pg.C_930051 N 0.701
e_gw1.317.27.1 Physcomitrella patens e_gw1.317.27.1 N 0.730
Eucgr.K02136 Eucalyptus grandis Eucgr.K02136 N 0.698
Cucsa.078000 Cucumis sativus Cucsa.078000 N 0.764
cassava6828.valid.m1 Manihot esculenta cassava6828.valid.m1 N 0.780
cassava38073.valid.m1 Manihot esculenta cassava38073.valid.m1 N 0.767
30217.m000254 Ricinus communis 30217.m000254 N 0.688
Pm020315 Prunus mume Pm020315 N 0.769
Cla015151 Citrullus lanatus Cla015151 N 0.764
Cla002744 Citrullus lanatus Cla002744 N 0.766
Ca_17230 Cicer arietinum Ca_17230 N 0.757
MDP0000300382 Malus domestica MDP0000300382 N 0.780
PDK_20s1512801g001 Phoenix dactylifera PDK_20s1512801g001 N 0.702
chr3.CM0423.200.nd Lotus japonicus chr3.CM0423.200.nd N 0.760
chr1.LjT46N10.100.nd Lotus japonicus chr1.LjT46N10.100.nd N 0.780
PK01824.1 Cannabis sativa PK01824.1 N 0.748
Thhalv10026242m.g Eutrema salsugineum Thhalv10026242m.g N 0.719
Pavir.J28064 Panicum virgatum Pavir.J28064 N 0.759
Pavir.Aa01947 Panicum virgatum Pavir.Aa01947 N 0.759
orange1.1g025914m.g Citrus sinensis orange1.1g025914m.g N 0.769
MDP0000675982 Malus domestica MDP0000675982 N 0.780
Ca_11707 Cicer arietinum Ca_11707 N 0.744
MDP0000129941 Malus domestica MDP0000129941 N 0.780
Lus10022769.g Linum usitatissimum Lus10022769.g N 0.772
Lus10011836.g Linum usitatissimum Lus10011836.g N 0.772
Gorai.007G156300 Gossypium raimondii Gorai.007G156300 N 0.766
Gorai.001G231300 Gossypium raimondii Gorai.001G231300 N 0.769
Gorai.001G188300 Gossypium raimondii Gorai.001G188300 N 0.780
Gorai.001G105100 Gossypium raimondii Gorai.001G105100 N 0.769
evm.TU.supercontig_21.106 Carica papaya evm.TU.supercontig_21.106 N 0.769
GSMUA_Achr6G06510_001 Musa acuminata GSMUA_Achr6G06510_001 N 0.707
OLONG_009588 Oryza longistaminata OLONG_009588 N 0.749
OGLUM02G17700 Oryza glumaepatula OGLUM02G17700 N 0.765
OBART02G17450 Oryza barthii OBART02G17450 N 0.765
OB02G25330 Oryza brachyantha OB02G25330 N 0.765
MTR_8g012655 Medicago truncatula MTR_8g012655 N 0.753
MTR_7g055857 Medicago truncatula MTR_7g055857 N 0.763
LPERR02G13930 Leersia perrieri LPERR02G13930 N 0.765
GSMUA_Achr9G01590_001 Musa acuminata GSMUA_Achr9G01590_001 N 0.760
GSMUA_Achr8G00300_001 Musa acuminata GSMUA_Achr8G00300_001 N 0.742
ONIVA02G18870 Oryza nivara ONIVA02G18870 N 0.765
GLYMA18G33460 Glycine max GLYMA18G33460 N 0.783
GLYMA08G46250 Glycine max GLYMA08G46250 N 0.784
F775_30629 Aegilops tauschii F775_30629 N 0.685
BRADI3G43822 Brachypodium distachyon BRADI3G43822 N 0.759
Bra034895 Brassica rapa Bra034895 N 0.719
Bo8g033910 Brassica oleracea Bo8g033910 N 0.719
Bo11579s010 Brassica oleracea Bo11579s010 N 0.710
BGIOSGA008254 Oryza indica BGIOSGA008254 N 0.765
SELMODRAFT_420254 Selaginella moellendorffii SELMODRAFT_420254 N 0.730
VIT_00s0184g00010 Vitis vinifera VIT_00s0184g00010 N 0.770
TRIUR3_27883 Triticum urartu TRIUR3_27883 N 0.685
Traes_6DS_43372C0A6 Triticum aestivum Traes_6DS_43372C0A6 N 0.759
Traes_6AL_13895C140 Triticum aestivum Traes_6AL_13895C140 N 0.759
TCM_002835 Theobroma cacao TCM_002835 N 0.769
Solyc09g059510.2 Solanum lycopersicum Solyc09g059510.2 N 0.758
Si018306m.g Setaria italica Si018306m.g N 0.759
SELMODRAFT_443366 Selaginella moellendorffii SELMODRAFT_443366 N 0.730
AT4G13040 Arabidopsis thaliana AT4G13040 N 0.726
Sb04g020150 Sorghum bicolor Sb04g020150 N 0.759
PRUPE_ppa011812mg Prunus persica PRUPE_ppa011812mg N 0.769
POPTR_0002s24750 Populus trichocarpa POPTR_0002s24750 N 0.769
PGSC0003DMG400017485 Solanum tuberosum PGSC0003DMG400017485 N 0.758
OS02G0499000 Oryza sativa OS02G0499000 N 0.765
ORUFI02G18290 Oryza rufipogon ORUFI02G18290 N 0.765
ORGLA02G0152600 Oryza glaberrima ORGLA02G0152600 N 0.765
OPUNC02G15530 Oryza punctata OPUNC02G15530 N 0.765