BGIOSGA026464 (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA026464 T000663_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.701 0.816
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.686 0.816
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.682 0.816
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.682 0.816
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.682 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA026464-PA AP2 53 104

Links

Other AP2 family TFs
Other Oryza indica TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB118 Arabidopsis thaliana AT3G27785 D
MYB98 Arabidopsis thaliana AT4G18770 D
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I
BGIOSGA022369 Oryza indica BGIOSGA022369 I
Bo1g019910 Brassica oleracea Bo1g019910 I
Bo2g028290 Brassica oleracea Bo2g028290 I
Bo3g018490 Brassica oleracea Bo3g018490 I
Bo3g157300 Brassica oleracea Bo3g157300 I
Bo7g106240 Brassica oleracea Bo7g106240 I
Bra006744 Brassica rapa Bra006744 I
Bra012579 Brassica rapa Bra012579 I
Bra013346 Brassica rapa Bra013346 I
Bra020346 Brassica rapa Bra020346 I
Bra020992 Brassica rapa Bra020992 I
Bra025299 Brassica rapa Bra025299 I
F775_22212 Aegilops tauschii F775_22212 I
MYB118 Arabidopsis lyrata fgenesh2_kg.5__560__AT3G27785.1 I
GLYMA05G02300 Glycine max GLYMA05G02300 I
GLYMA06G19280 Glycine max GLYMA06G19280 I
GLYMA16G07927 Glycine max GLYMA16G07927 I
GRMZM2G302549 Zea mays GRMZM2G302549 I
GRMZM5G870592 Zea mays GRMZM5G870592 I
GSMUA_Achr3G19490_001 Musa acuminata GSMUA_Achr3G19490_001 I
LPERR06G03780 Leersia perrieri LPERR06G03780 I
LPERR12G04190 Leersia perrieri LPERR12G04190 I
MTR_3g077650 Medicago truncatula MTR_3g077650 I
MTR_5g049190 Medicago truncatula MTR_5g049190 I
OB06G13860 Oryza brachyantha OB06G13860 I
OBART06G04170 Oryza barthii OBART06G04170 I
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I
OLONG_010000 Oryza longistaminata OLONG_010000 I
OMERI06G04840 Oryza meridionalis OMERI06G04840 I
ONIVA06G05390 Oryza nivara ONIVA06G05390 I
OPUNC06G03990 Oryza punctata OPUNC06G03990 I
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I
OS06G0162700 Oryza sativa OS06G0162700 I
PGSC0003DMG400018092 Solanum tuberosum PGSC0003DMG400018092 I
PGSC0003DMG400036895 Solanum tuberosum PGSC0003DMG400036895 I
MYB118 Populus trichocarpa POPTR_0001s35140 I
POPTR_0012s08360 Populus trichocarpa POPTR_0012s08360 I
POPTR_0015s08880 Populus trichocarpa POPTR_0015s08880 I
PRUPE_ppa019507mg Prunus persica PRUPE_ppa019507mg I
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I
Sb01g005100 Sorghum bicolor Sb01g005100 I
MYB98 Arabidopsis lyrata scaffold_702543.1 I
Si039046m.g Setaria italica Si039046m.g I
Solyc03g112890.1 Solanum lycopersicum Solyc03g112890.1 I
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I
TCM_012087 Theobroma cacao TCM_012087 I
Traes_1BL_4D9406708 Triticum aestivum Traes_1BL_4D9406708 I
Traes_1DL_918A8F357 Triticum aestivum Traes_1DL_918A8F357 I
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I
Traes_7DS_E27ECBC6E Triticum aestivum Traes_7DS_E27ECBC6E I
TRIUR3_12421 Triticum urartu TRIUR3_12421 I
MYB98 Vitis vinifera VIT_17s0000g08550 I
Ca_07482 Cicer arietinum Ca_07482 I
Ca_17087 Cicer arietinum Ca_17087 I
Ca_17294 Cicer arietinum Ca_17294 I
Ca_19427 Cicer arietinum Ca_19427 I
Cla010586 Citrullus lanatus Cla010586 I
Cla019490 Citrullus lanatus Cla019490 I
Pm015681 Prunus mume Pm015681 I
Pm024743 Prunus mume Pm024743 I
29917.m001977 Ricinus communis 29917.m001977 I
30147.m013937 Ricinus communis 30147.m013937 I
cassava19706.m1 Manihot esculenta cassava19706.m1 I
cassava33974.m1 Manihot esculenta cassava33974.m1 I
Cucsa.196850 Cucumis sativus Cucsa.196850 I
mg025334m Mimulus guttatus mg025334m I
mgf023372m Mimulus guttatus mgf023372m I
mgf024290m Mimulus guttatus mgf024290m I
Aquca_045_00020 Aquilegia coerulea Aquca_045_00020 I
Bostr.0556s0457 Boechera stricta Bostr.0556s0457 I
Bostr.30275s0352 Boechera stricta Bostr.30275s0352 I
Cagra.11216s0002 Capsella grandiflora Cagra.11216s0002 I
Cagra.4306s0015 Capsella grandiflora Cagra.4306s0015 I
Carubv10006734m.g Capsella rubella Carubv10006734m.g I
Carubv10018693m.g Capsella rubella Carubv10018693m.g I
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I
Lus10002384.g Linum usitatissimum Lus10002384.g I
Lus10027695.g Linum usitatissimum Lus10027695.g I
Lus10039966.g Linum usitatissimum Lus10039966.g I
Lus10042111.g Linum usitatissimum Lus10042111.g I
MDP0000199939 Malus domestica MDP0000199939 I
MDP0000215359 Malus domestica MDP0000215359 I
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I
Pavir.J02497 Panicum virgatum Pavir.J02497 I
Pavir.J02718 Panicum virgatum Pavir.J02718 I
Pavir.J25000 Panicum virgatum Pavir.J25000 I
Pavir.J37434 Panicum virgatum Pavir.J37434 I
SapurV1A.0396s0170 Salix purpurea SapurV1A.0396s0170 I
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I
SapurV1A.2163s0040 Salix purpurea SapurV1A.2163s0040 I
Thhalv10005564m.g Eutrema salsugineum Thhalv10005564m.g I
Thhalv10016057m.g Eutrema salsugineum Thhalv10016057m.g I
Thhalv10026824m.g Eutrema salsugineum Thhalv10026824m.g I
AMTR_s00001p00272410 Amborella trichopoda AMTR_s00001p00272410 N
GSMUA_Achr10G00770_001 Musa acuminata GSMUA_Achr10G00770_001 N
GSMUA_Achr3G09050_001 Musa acuminata GSMUA_Achr3G09050_001 N
GSMUA_Achr6G33700_001 Musa acuminata GSMUA_Achr6G33700_001 N
MTR_4g105660 Medicago truncatula MTR_4g105660 N
Cagra.1398s0045 Capsella grandiflora Cagra.1398s0045 N
Carubv10003695m.g Capsella rubella Carubv10003695m.g N
Lus10018220.g Linum usitatissimum Lus10018220.g N
Lus10040684.g Linum usitatissimum Lus10040684.g N
Thhalv10015404m.g Eutrema salsugineum Thhalv10015404m.g N
Thhalv10027294m.g Eutrema salsugineum Thhalv10027294m.g N
PDK_20s1782461g001 Phoenix dactylifera PDK_20s1782461g001 N