BRADI2G29960 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI2G29960 T001302_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q84ND8_HORVU
M09719_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DRF11_01 		0.744 0.940
Q84JE9_HORVU
M09718_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DRF13_01 		0.744 0.940
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.716 0.880
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.678 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G29960.1 AP2 130 181
BRADI2G29960.2 AP2 84 135
BRADI2G29960.3 AP2 12 63
BRADI2G29960.4 AP2 12 63

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK07402.1 Cannabis sativa PK07402.1 D 0.678
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.716
Q84JE9_HORVU Hordeum vulgare Q84JE9_HORVU D 0.744
Q84ND8_HORVU Hordeum vulgare Q84ND8_HORVU D 0.744
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.724
ORGLA05G0107600 Oryza glaberrima ORGLA05G0107600 I 0.719
ORUFI05G13560 Oryza rufipogon ORUFI05G13560 I 0.717
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.718
Si022619m.g Setaria italica Si022619m.g I 0.688
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.724
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.724
OPUNC05G10700 Oryza punctata OPUNC05G10700 I 0.727
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.677
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.678
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.678
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.718
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.718
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.690
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.690
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.690
LPERR05G09930 Leersia perrieri LPERR05G09930 I 0.729
BGIOSGA018253 Oryza indica BGIOSGA018253 I 0.727
Bo9g177130 Brassica oleracea Bo9g177130 I 0.692
F775_32062 Aegilops tauschii F775_32062 I 0.724
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.698
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.680
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.716
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.678
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.682
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.681
MLOC_77405 Hordeum vulgare MLOC_77405 I 0.744
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.691
OB05G20700 Oryza brachyantha OB05G20700 I 0.723
OBART05G12580 Oryza barthii OBART05G12580 I 0.719
OGLUM05G13290 Oryza glumaepatula OGLUM05G13290 I 0.727
OLONG_017780 Oryza longistaminata OLONG_017780 I 0.727
OMERI05G11290 Oryza meridionalis OMERI05G11290 I 0.727
ONIVA05G13030 Oryza nivara ONIVA05G13030 I 0.727