Ca_12446 (Cicer arietinum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Ca_12446 T006341_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.727 0.918
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_12446 AP2 84 135

Links

Other AP2 family TFs
Other Cicer arietinum TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.G02067 Eucalyptus grandis Eucgr.G02067 N 0.000
chr4.CM0387.290.nc Lotus japonicus chr4.CM0387.290.nc N 0.000
PK28293.1 Cannabis sativa PK28293.1 N 0.000
SapurV1A.0055s0040 Salix purpurea SapurV1A.0055s0040 N 0.000
SapurV1A.0015s0840 Salix purpurea SapurV1A.0015s0840 N 0.000
orange1.1g022806m.g Citrus sinensis orange1.1g022806m.g N 0.000
MDP0000826219 Malus domestica MDP0000826219 N 0.000
MDP0000320521 Malus domestica MDP0000320521 N 0.000
Lus10040427.g Linum usitatissimum Lus10040427.g N 0.000
Lus10023543.g Linum usitatissimum Lus10023543.g N 0.000
Gorai.012G183100 Gossypium raimondii Gorai.012G183100 N 0.000
Gorai.005G154200 Gossypium raimondii Gorai.005G154200 N 0.000
Gorai.002G171200 Gossypium raimondii Gorai.002G171200 N 0.000
gene00620-v1.0-hybrid Fragaria vesca gene00620-v1.0-hybrid N 0.000
evm.TU.supercontig_2.121 Carica papaya evm.TU.supercontig_2.121 N 0.000
GLYMA05G26790 Glycine max GLYMA05G26790 N 0.000
Ciclev10015354m.g Citrus clementina Ciclev10015354m.g N 0.000
Cucsa.026600 Cucumis sativus Cucsa.026600 N 0.000
cassava39873.m1 Manihot esculenta cassava39873.m1 N 0.000
cassava18078.valid.m1 Manihot esculenta cassava18078.valid.m1 N 0.000
29780.m001393 Ricinus communis 29780.m001393 N 0.000
Pm005924 Prunus mume Pm005924 N 0.000
Cla005911 Citrullus lanatus Cla005911 N 0.000
VIT_01s0011g06380 Vitis vinifera VIT_01s0011g06380 N 0.000
TCM_011212 Theobroma cacao TCM_011212 N 0.000
PRUPE_ppa009765mg Prunus persica PRUPE_ppa009765mg N 0.000
POPTR_0010s11180 Populus trichocarpa POPTR_0010s11180 N 0.000
POPTR_0008s13960 Populus trichocarpa POPTR_0008s13960 N 0.000
PGSC0003DMG402029444 Solanum tuberosum PGSC0003DMG402029444 N 0.000
GLYMA08G09780 Glycine max GLYMA08G09780 N 0.000