cassava8476.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava8476.m1 T006973_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF019
M01092_2.00 		Arabidopsis thaliana
CRCCGRCV
BGYCGGYG		 PBM
Lambert et al.(2019)
pTH11534 		0.707 0.760
ERF019
M06571_2.00 		Arabidopsis thaliana
HDYCACCGACAHNNN
NNNDTGTCGGTGRHD		 Dap-seq
OMalley et al.(2016)
At1g22810_colamp_a 		0.707 0.760
ERF019
M06572_2.00 		Arabidopsis thaliana
DYCACCGHCRHHDYC
GRHDDYGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g22810_col 		0.707 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava8476.m1 AP2 21 72

Links

Other AP2 family TFs
Other Manihot esculenta TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HESX1 Homo sapiens ENSG00000163666 D
EVEC_0000357701 Enterobius vermicularis EVEC_0000357701 I
Aan_R011917 Calypte anna Aan_R011917 I
Cmyd_10001740 Chelonia mydas Cmyd_10001740 I
Cmyd_10012400 Chelonia mydas Cmyd_10012400 I
ENSP00000360811-D1 Bos grunniens ENSP00000360811-D1 I
Gfo_R002825 Geospiza fortis Gfo_R002825 I
Ogr03859 Ophisaurus gracilis Ogr03859 I
CLEC007171 Cimex lectularius CLEC007171 I
LDEC008146 Leptinotarsa decemlineata LDEC008146 I
ACUA026833 Anopheles culicifacies ACUA026833 I
AMAM000848 Anopheles maculatus AMAM000848 I
BGLB013824 Biomphalaria glabrata BGLB013824 I
ALUE_0000848601 Ascaris lumbricoides ALUE_0000848601 I
ALUE_0001497801 Ascaris lumbricoides ALUE_0001497801 I
CGI_10009720 Crassostrea gigas CGI_10009720 I
HPBE_0000873701 Heligmosomoides bakeri HPBE_0000873701 I
HPLM_0001894101 Haemonchus placei HPLM_0001894101 I
L596_g8967 Steinernema carpocapsae L596_g8967 I
NBR_0000705501 Nippostrongylus brasiliensis NBR_0000705501 I
NECAME_16530 Necator americanus NECAME_16530 I
nLs.2.1.2.g05836 Litomosoides sigmodontis nLs.2.1.2.g05836 I
PEQ_0001388201 Parascaris equorum PEQ_0001388201 I
SBAD_0000602401 Soboliphyme baturini SBAD_0000602401 I
scaffold251-EXSNAP2012.22 Pristionchus exspectatus scaffold251-EXSNAP2012.22 I
SROB_0001564301 Schistosoma rodhaini SROB_0001564301 I
T265_02852 Opisthorchis viverrini T265_02852 I
TELCIR_07728 Teladorsagia circumcincta TELCIR_07728 I
ENSPSIG00000014030 Pelodiscus sinensis ENSPSIG00000014030 I
ENSFCAG00000029037 Felis catus ENSFCAG00000029037 I
ENSLACG00000001487 Latimeria chalumnae ENSLACG00000001487 I
ENSCSAVG00000000940 Ciona savignyi ENSCSAVG00000000940 I
PRRX2 Cavia porcellus ENSCPOG00000021821 I
DBX1 Callithrix jacchus ENSCJAG00000006734 I
ENSAMEG00000004942 Ailuropoda melanoleuca ENSAMEG00000004942 I
CGI_10016653 Crassostrea gigas CGI_10016653 I
BGIBMGA003233 Bombyx mori BGIBMGA003233 I
meox1 Takifugu rubripes ENSTRUG00000005193 I
ENSTSYG00000014450 Tarsius syrichta ENSTSYG00000014450 I
tetur14g02510 Tetranychus urticae tetur14g02510 I
L798_06393 Zootermopsis nevadensis L798_06393 I
MCINX007054 Melitaea cinxia MCINX007054 I
MCINX008871 Melitaea cinxia MCINX008871 I
tetur02g13510 Tetranychus urticae tetur02g13510 I
TTAC_0001021101 Hydatigera taeniaeformis TTAC_0001021101 N
ENSAMEG00000004660 Ailuropoda melanoleuca ENSAMEG00000004660 N
TTAC_0000701101 Hydatigera taeniaeformis TTAC_0000701101 N
Dbx1 Dipodomys ordii ENSDORG00000009286 N
DBX1 Echinops telfairi ENSETEG00000017576 N
MCOS_0000655901 Mesocestoides corti MCOS_0000655901 N
DBX1 Gorilla gorilla ENSGGOG00000014848 N
HDID_0000333701 Hymenolepis diminuta HDID_0000333701 N
DBX1 Microcebus murinus ENSMICG00000017111 N
ENSNLEG00000017811 Nomascus leucogenys ENSNLEG00000017811 N
DBX1 Ochotona princeps ENSOPRG00000012954 N
DBX1 Procavia capensis ENSPCAG00000004905 N
ASTEI06918 Anopheles stephensi ASTEI06918 N
ENSPPYG00000003422 Pongo abelii ENSPPYG00000003422 N
DBX1 Pan troglodytes ENSPTRG00000003437 N
Ogr00185 Ophisaurus gracilis Ogr00185 N
DBX1 Tursiops truncatus ENSTTRG00000000318 N