Cagra.2997s0002 (Capsella grandiflora)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cagra.2997s0002 T007772_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2997s0002.1.p AP2 124 172
Cagra.2997s0002.2.p AP2 116 164

Links

Other AP2 family TFs
Other Capsella grandiflora TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.150110 Cucumis sativus Cucsa.150110 N 0.710
Ciclev10021891m.g Citrus clementina Ciclev10021891m.g N 0.732
Carubv10005663m.g Capsella rubella Carubv10005663m.g N 0.784
Bostr.2021s0045 Boechera stricta Bostr.2021s0045 N 0.784
mgf007349m Mimulus guttatus mgf007349m N 0.720
mgf003727m Mimulus guttatus mgf003727m N 0.730
mgf003491m Mimulus guttatus mgf003491m N 0.720
e_gw1.317.27.1 Physcomitrella patens e_gw1.317.27.1 N 0.713
Eucgr.K02136 Eucalyptus grandis Eucgr.K02136 N 0.693
Cucsa.078000 Cucumis sativus Cucsa.078000 N 0.704
cassava6828.valid.m1 Manihot esculenta cassava6828.valid.m1 N 0.726
cassava38073.valid.m1 Manihot esculenta cassava38073.valid.m1 N 0.717
Pm020315 Prunus mume Pm020315 N 0.732
Cla015151 Citrullus lanatus Cla015151 N 0.704
Cla002744 Citrullus lanatus Cla002744 N 0.729
Ca_17230 Cicer arietinum Ca_17230 N 0.713
Ca_11707 Cicer arietinum Ca_11707 N 0.729
MDP0000300382 Malus domestica MDP0000300382 N 0.726
chr3.CM0423.200.nd Lotus japonicus chr3.CM0423.200.nd N 0.729
chr1.LjT46N10.100.nd Lotus japonicus chr1.LjT46N10.100.nd N 0.726
PK01824.1 Cannabis sativa PK01824.1 N 0.761
Thhalv10026242m.g Eutrema salsugineum Thhalv10026242m.g N 0.784
Pavir.J28064 Panicum virgatum Pavir.J28064 N 0.709
Pavir.Aa01947 Panicum virgatum Pavir.Aa01947 N 0.709
orange1.1g025914m.g Citrus sinensis orange1.1g025914m.g N 0.732
MDP0000675982 Malus domestica MDP0000675982 N 0.726
VIT_00s0184g00010 Vitis vinifera VIT_00s0184g00010 N 0.710
MDP0000129941 Malus domestica MDP0000129941 N 0.726
Lus10022769.g Linum usitatissimum Lus10022769.g N 0.723
Lus10011836.g Linum usitatissimum Lus10011836.g N 0.723
Gorai.007G156300 Gossypium raimondii Gorai.007G156300 N 0.726
Gorai.001G231300 Gossypium raimondii Gorai.001G231300 N 0.732
Gorai.001G188300 Gossypium raimondii Gorai.001G188300 N 0.726
Gorai.001G105100 Gossypium raimondii Gorai.001G105100 N 0.732
evm.TU.supercontig_21.106 Carica papaya evm.TU.supercontig_21.106 N 0.732
GSMUA_Achr6G06510_001 Musa acuminata GSMUA_Achr6G06510_001 N 0.693
OGLUM02G17700 Oryza glumaepatula OGLUM02G17700 N 0.715
OBART02G17450 Oryza barthii OBART02G17450 N 0.715
OB02G25330 Oryza brachyantha OB02G25330 N 0.715
MTR_8g012655 Medicago truncatula MTR_8g012655 N 0.726
MTR_7g055857 Medicago truncatula MTR_7g055857 N 0.703
LPERR02G13930 Leersia perrieri LPERR02G13930 N 0.715
GSMUA_Achr9G01590_001 Musa acuminata GSMUA_Achr9G01590_001 N 0.710
GSMUA_Achr8G00300_001 Musa acuminata GSMUA_Achr8G00300_001 N 0.693
OLONG_009588 Oryza longistaminata OLONG_009588 N 0.705
GLYMA18G33460 Glycine max GLYMA18G33460 N 0.716
GLYMA08G46250 Glycine max GLYMA08G46250 N 0.720
BRADI3G43822 Brachypodium distachyon BRADI3G43822 N 0.709
Bra034895 Brassica rapa Bra034895 N 0.784
Bo8g033910 Brassica oleracea Bo8g033910 N 0.784
Bo11579s010 Brassica oleracea Bo11579s010 N 0.768
BGIOSGA008254 Oryza indica BGIOSGA008254 N 0.715
AT4G13040 Arabidopsis thaliana AT4G13040 N 0.778
PRUPE_ppa011812mg Prunus persica PRUPE_ppa011812mg N 0.732
Traes_6DS_43372C0A6 Triticum aestivum Traes_6DS_43372C0A6 N 0.709
Traes_6AL_13895C140 Triticum aestivum Traes_6AL_13895C140 N 0.709
TCM_002835 Theobroma cacao TCM_002835 N 0.732
Solyc09g059510.2 Solanum lycopersicum Solyc09g059510.2 N 0.721
Si018306m.g Setaria italica Si018306m.g N 0.709
SELMODRAFT_443366 Selaginella moellendorffii SELMODRAFT_443366 N 0.696
SELMODRAFT_420254 Selaginella moellendorffii SELMODRAFT_420254 N 0.696
Sb04g020150 Sorghum bicolor Sb04g020150 N 0.709
AMTR_s00013p00252260 Amborella trichopoda AMTR_s00013p00252260 N 0.719
POPTR_0002s24750 Populus trichocarpa POPTR_0002s24750 N 0.732
PGSC0003DMG400017485 Solanum tuberosum PGSC0003DMG400017485 N 0.721
OS02G0499000 Oryza sativa OS02G0499000 N 0.715
ORUFI02G18290 Oryza rufipogon ORUFI02G18290 N 0.715
ORGLA02G0152600 Oryza glaberrima ORGLA02G0152600 N 0.715
OPUNC02G15530 Oryza punctata OPUNC02G15530 N 0.715
ONIVA02G18870 Oryza nivara ONIVA02G18870 N 0.715