Cmyd_10012612 (Chelonia mydas)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Cmyd_10012612 T015888_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.457 0.402
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.457 0.390
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10012612 ARID/BRIGHT 15 97

Links

Other ARID/BRIGHT family TFs
Other Chelonia mydas TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ABF2 Arabidopsis thaliana AT1G45249 D
ABI5 Arabidopsis thaliana AT2G36270 D
ABF4 Arabidopsis thaliana AT3G19290 D
OS08G0471950 Oryza sativa OS08G0471950 D
PK18009.1 Cannabis sativa PK18009.1 D
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I
BGIOSGA004837 Oryza indica BGIOSGA004837 I
BGIOSGA028831 Oryza indica BGIOSGA028831 I
BGIOSGA030899 Oryza indica BGIOSGA030899 I
Bo1g007700 Brassica oleracea Bo1g007700 I
Bo5g115300 Brassica oleracea Bo5g115300 I
Bo6g006970 Brassica oleracea Bo6g006970 I
Bo7g116570 Brassica oleracea Bo7g116570 I
Bra022409 Brassica rapa Bra022409 I
Bra037533 Brassica rapa Bra037533 I
Bra040260 Brassica rapa Bra040260 I
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I
F775_32479 Aegilops tauschii F775_32479 I
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I
GLYMA04G04170 Glycine max GLYMA04G04170 I
GLYMA06G04353 Glycine max GLYMA06G04353 I
GLYMA10G08370 Glycine max GLYMA10G08370 I
GLYMA13G22061 Glycine max GLYMA13G22061 I
GLYMA19G37910 Glycine max GLYMA19G37910 I
GRMZM2G002075 Zea mays GRMZM2G002075 I
GRMZM2G157722 Zea mays GRMZM2G157722 I
GRMZM2G168079 Zea mays GRMZM2G168079 I
GRMZM2G478417 Zea mays GRMZM2G478417 I
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I
LPERR01G32620 Leersia perrieri LPERR01G32620 I
LPERR08G14740 Leersia perrieri LPERR08G14740 I
LPERR09G09170 Leersia perrieri LPERR09G09170 I
MLOC_34679 Hordeum vulgare MLOC_34679 I
MLOC_61490 Hordeum vulgare MLOC_61490 I
MTR_3g101780 Medicago truncatula MTR_3g101780 I
MTR_7g104480 Medicago truncatula MTR_7g104480 I
OB01G46760 Oryza brachyantha OB01G46760 I
OB08G24950 Oryza brachyantha OB08G24950 I
OBART01G37980 Oryza barthii OBART01G37980 I
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I
OLONG_014546 Oryza longistaminata OLONG_014546 I
OMERI01G34950 Oryza meridionalis OMERI01G34950 I
OMERI09G10130 Oryza meridionalis OMERI09G10130 I
ONIVA04G25730 Oryza nivara ONIVA04G25730 I
OPUNC05G18710 Oryza punctata OPUNC05G18710 I
OPUNC08G15700 Oryza punctata OPUNC08G15700 I
OPUNC09G11090 Oryza punctata OPUNC09G11090 I
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I
OS01G0859300 Oryza sativa OS01G0859300 I
OS09G0456200 Oryza sativa OS09G0456200 I
PGSC0003DMG400002660 Solanum tuberosum PGSC0003DMG400002660 I
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I
ABI5 Populus trichocarpa POPTR_0006s08300 I
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I
Sb06g026410 Sorghum bicolor Sb06g026410 I
Sb07g022965 Sorghum bicolor Sb07g022965 I
SELMODRAFT_227594 Selaginella moellendorffii SELMODRAFT_227594 I
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I
SELMODRAFT_428822 Selaginella moellendorffii SELMODRAFT_428822 I
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I
SELMODRAFT_451399 Selaginella moellendorffii SELMODRAFT_451399 I
SELMODRAFT_91900 Selaginella moellendorffii SELMODRAFT_91900 I
SELMODRAFT_94516 Selaginella moellendorffii SELMODRAFT_94516 I
Si013904m.g Setaria italica Si013904m.g I
Si030114m.g Setaria italica Si030114m.g I
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I
Solyc09g009490.2 Solanum lycopersicum Solyc09g009490.2 I
TCM_007074 Theobroma cacao TCM_007074 I
TCM_022574 Theobroma cacao TCM_022574 I
TCM_033824 Theobroma cacao TCM_033824 I
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I
Traes_4AS_F9C171219 Triticum aestivum Traes_4AS_F9C171219 I
Traes_4BL_4C9A415F3 Triticum aestivum Traes_4BL_4C9A415F3 I
Traes_4DL_F38ED7FB6 Triticum aestivum Traes_4DL_F38ED7FB6 I
TRIUR3_15490 Triticum urartu TRIUR3_15490 I
TRIUR3_29638 Triticum urartu TRIUR3_29638 I
TRIUR3_31111 Triticum urartu TRIUR3_31111 I
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I
DPBF2 Vitis vinifera VIT_06s0080g00340 I
VIT_18s0001g04500 Vitis vinifera VIT_18s0001g04500 I
ABF2 Vitis vinifera VIT_18s0001g10450 I
Ca_00791 Cicer arietinum Ca_00791 I
Ca_01548 Cicer arietinum Ca_01548 I
Cla016272 Citrullus lanatus Cla016272 I
Cla022926 Citrullus lanatus Cla022926 I
Pm001315 Prunus mume Pm001315 I
Pm005288 Prunus mume Pm005288 I
Pm021430 Prunus mume Pm021430 I
29625.m000702 Ricinus communis 29625.m000702 I
29801.m003176 Ricinus communis 29801.m003176 I
30055.m001548 Ricinus communis 30055.m001548 I
30170.m013868 Ricinus communis 30170.m013868 I
cassava11518.m1 Manihot esculenta cassava11518.m1 I
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I
cassava16074.m1 Manihot esculenta cassava16074.m1 I
cassava32856.m1 Manihot esculenta cassava32856.m1 I
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I
Cucsa.219780 Cucumis sativus Cucsa.219780 I
Cucsa.241090 Cucumis sativus Cucsa.241090 I
Cucsa.396070 Cucumis sativus Cucsa.396070 I
mgf002047m Mimulus guttatus mgf002047m I
mgf002176m Mimulus guttatus mgf002176m I
mgf007524m Mimulus guttatus mgf007524m I
mgf014602m Mimulus guttatus mgf014602m I
mgf020824m Mimulus guttatus mgf020824m I
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I
Carubv10009177m.g Capsella rubella Carubv10009177m.g I
Carubv10013729m.g Capsella rubella Carubv10013729m.g I
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I
Gorai.002G240500 Gossypium raimondii Gorai.002G240500 I
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I
Gorai.006G155600 Gossypium raimondii Gorai.006G155600 I
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I
Lus10002399.g Linum usitatissimum Lus10002399.g I
Lus10009755.g Linum usitatissimum Lus10009755.g I
Lus10014194.g Linum usitatissimum Lus10014194.g I
Lus10017049.g Linum usitatissimum Lus10017049.g I
Lus10021369.g Linum usitatissimum Lus10021369.g I
Lus10022720.g Linum usitatissimum Lus10022720.g I
MDP0000248567 Malus domestica MDP0000248567 I
MDP0000296303 Malus domestica MDP0000296303 I
MDP0000701734 Malus domestica MDP0000701734 I
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I
orange1.1g037676m.g Citrus sinensis orange1.1g037676m.g I
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I
Pavir.J35078 Panicum virgatum Pavir.J35078 I
SapurV1A.0001s2050 Salix purpurea SapurV1A.0001s2050 I
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I
PK02169.1 Cannabis sativa PK02169.1 I
chr1.CM0010.310.nd Lotus japonicus chr1.CM0010.310.nd I
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I