Bra013535 (Brassica rapa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bra013535 T018823_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra013535.1-P B3 317 418

Links

Other B3 family TFs
Other Brassica rapa TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0001_3341 Arabidopsis lyrata Al_scaffold_0001_3341 N
Al_scaffold_0001_3792 Arabidopsis lyrata Al_scaffold_0001_3792 N
AMTR_s00002p00211460 Amborella trichopoda AMTR_s00002p00211460 N
AMTR_s00008p00208550 Amborella trichopoda AMTR_s00008p00208550 N
AMTR_s00022p00039680 Amborella trichopoda AMTR_s00022p00039680 N
AT1G21000 Arabidopsis thaliana AT1G21000 N
AT1G32700 Arabidopsis thaliana AT1G32700 N
AT1G43000 Arabidopsis thaliana AT1G43000 N
AT1G76590 Arabidopsis thaliana AT1G76590 N
AT4G17900 Arabidopsis thaliana AT4G17900 N
BGIOSGA005806 Oryza indica BGIOSGA005806 N
BGIOSGA014451 Oryza indica BGIOSGA014451 N
BGIOSGA023292 Oryza indica BGIOSGA023292 N
Bo1g018010 Brassica oleracea Bo1g018010 N
Bo5g030950 Brassica oleracea Bo5g030950 N
Bo5g049240 Brassica oleracea Bo5g049240 N
Bo6g084850 Brassica oleracea Bo6g084850 N
Bo6g120700 Brassica oleracea Bo6g120700 N
Bo7g059750 Brassica oleracea Bo7g059750 N
Bo7g075640 Brassica oleracea Bo7g075640 N
Bo7g105550 Brassica oleracea Bo7g105550 N
Bo8g028900 Brassica oleracea Bo8g028900 N
Bo8g049810 Brassica oleracea Bo8g049810 N
Bo8g070540 Brassica oleracea Bo8g070540 N
Bra003715 Brassica rapa Bra003715 N
Bra012263 Brassica rapa Bra012263 N
Bra012632 Brassica rapa Bra012632 N
Bra013266 Brassica rapa Bra013266 N
Bra015731 Brassica rapa Bra015731 N
Bra016441 Brassica rapa Bra016441 N
Bra017531 Brassica rapa Bra017531 N
Bra021029 Brassica rapa Bra021029 N
Bra023280 Brassica rapa Bra023280 N
Bra025003 Brassica rapa Bra025003 N
Bra025865 Brassica rapa Bra025865 N
Bra035494 Brassica rapa Bra035494 N
BRADI1G35697 Brachypodium distachyon BRADI1G35697 N
BRADI3G52170 Brachypodium distachyon BRADI3G52170 N
F775_08136 Aegilops tauschii F775_08136 N
F775_28196 Aegilops tauschii F775_28196 N
fgenesh2_kg.2__1947__AT1G76590.1 Arabidopsis lyrata fgenesh2_kg.2__1947__AT1G76590.1 N
fgenesh2_kg.7__2515__AT4G17900.1 Arabidopsis lyrata fgenesh2_kg.7__2515__AT4G17900.1 N
GLYMA01G02180 Glycine max GLYMA01G02180 N
GLYMA01G11390 Glycine max GLYMA01G11390 N
GLYMA01G44430 Glycine max GLYMA01G44430 N
GLYMA08G36641 Glycine max GLYMA08G36641 N
GLYMA09G33770 Glycine max GLYMA09G33770 N
GLYMA10G07240 Glycine max GLYMA10G07240 N
GLYMA11G01100 Glycine max GLYMA11G01100 N
GLYMA11G11640 Glycine max GLYMA11G11640 N
GLYMA12G01890 Glycine max GLYMA12G01890 N
GLYMA13G21140 Glycine max GLYMA13G21140 N
GLYMA19G37220 Glycine max GLYMA19G37220 N
GRMZM2G004548 Zea mays GRMZM2G004548 N
GRMZM2G086403 Zea mays GRMZM2G086403 N
GRMZM2G091044 Zea mays GRMZM2G091044 N
GRMZM2G131280 Zea mays GRMZM2G131280 N
GSMUA_Achr11G17810_001 Musa acuminata GSMUA_Achr11G17810_001 N
GSMUA_Achr2G18160_001 Musa acuminata GSMUA_Achr2G18160_001 N
GSMUA_Achr4G27280_001 Musa acuminata GSMUA_Achr4G27280_001 N
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N
GSMUA_Achr5G13970_001 Musa acuminata GSMUA_Achr5G13970_001 N
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N
GSMUA_Achr6G36360_001 Musa acuminata GSMUA_Achr6G36360_001 N
GSMUA_Achr7G04460_001 Musa acuminata GSMUA_Achr7G04460_001 N
GSMUA_Achr7G20650_001 Musa acuminata GSMUA_Achr7G20650_001 N
GSMUA_Achr9G12280_001 Musa acuminata GSMUA_Achr9G12280_001 N
GSMUA_AchrUn_randomG07560_001 Musa acuminata GSMUA_AchrUn_randomG07560_001 N
GSMUA_AchrUn_randomG24560_001 Musa acuminata GSMUA_AchrUn_randomG24560_001 N
LPERR02G23300 Leersia perrieri LPERR02G23300 N
LPERR04G19240 Leersia perrieri LPERR04G19240 N
LPERR06G17910 Leersia perrieri LPERR06G17910 N
MLOC_59330 Hordeum vulgare MLOC_59330 N
MLOC_63157 Hordeum vulgare MLOC_63157 N
MLOC_69202 Hordeum vulgare MLOC_69202 N
MTR_4g078170 Medicago truncatula MTR_4g078170 N
MTR_5g007230 Medicago truncatula MTR_5g007230 N
MTR_5g030130 Medicago truncatula MTR_5g030130 N
MTR_7g102790 Medicago truncatula MTR_7g102790 N
MTR_8g066820 Medicago truncatula MTR_8g066820 N
OB02G35810 Oryza brachyantha OB02G35810 N
OB04G30420 Oryza brachyantha OB04G30420 N
OB06G29400 Oryza brachyantha OB06G29400 N
OB10G26540 Oryza brachyantha OB10G26540 N
OBART02G28660 Oryza barthii OBART02G28660 N
OBART04G23520 Oryza barthii OBART04G23520 N
OBART06G21430 Oryza barthii OBART06G21430 N
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N
OGLUM04G23440 Oryza glumaepatula OGLUM04G23440 N
OGLUM06G22610 Oryza glumaepatula OGLUM06G22610 N
OLONG_015674 Oryza longistaminata OLONG_015674 N
OLONG_023395 Oryza longistaminata OLONG_023395 N
OMERI01G31170 Oryza meridionalis OMERI01G31170 N
ONIVA02G31400 Oryza nivara ONIVA02G31400 N
ONIVA04G22750 Oryza nivara ONIVA04G22750 N
ONIVA06G25330 Oryza nivara ONIVA06G25330 N
OPUNC02G26310 Oryza punctata OPUNC02G26310 N
OPUNC04G21040 Oryza punctata OPUNC04G21040 N
OPUNC06G19460 Oryza punctata OPUNC06G19460 N
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N
ORGLA04G0200500 Oryza glaberrima ORGLA04G0200500 N
ORGLA06G0177200 Oryza glaberrima ORGLA06G0177200 N
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N
ORUFI04G25190 Oryza rufipogon ORUFI04G25190 N
ORUFI06G22980 Oryza rufipogon ORUFI06G22980 N
OS02G0692700 Oryza sativa OS02G0692700 N
OS04G0591100 Oryza sativa OS04G0591100 N
OS06G0624900 Oryza sativa OS06G0624900 N
PGSC0003DMG400007670 Solanum tuberosum PGSC0003DMG400007670 N
PGSC0003DMG400009931 Solanum tuberosum PGSC0003DMG400009931 N
PGSC0003DMG400017518 Solanum tuberosum PGSC0003DMG400017518 N
PGSC0003DMG400017849 Solanum tuberosum PGSC0003DMG400017849 N
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N
POPTR_0002s00430 Populus trichocarpa POPTR_0002s00430 N
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N
XM_002306973.1 Populus trichocarpa POPTR_0005s28040 N
POPTR_0006s12100 Populus trichocarpa POPTR_0006s12100 N
POPTR_0013s07610 Populus trichocarpa POPTR_0013s07610 N
POPTR_0019s07790 Populus trichocarpa POPTR_0019s07790 N
PRUPE_ppa010445mg Prunus persica PRUPE_ppa010445mg N
PRUPE_ppa011266mg Prunus persica PRUPE_ppa011266mg N
Sb04g031230 Sorghum bicolor Sb04g031230 N
Sb06g027000 Sorghum bicolor Sb06g027000 N
Sb10g024575 Sorghum bicolor Sb10g024575 N
scaffold_102351.1 Arabidopsis lyrata scaffold_102351.1 N
scaffold_800157.1 Arabidopsis lyrata scaffold_800157.1 N
Si007136m.g Setaria italica Si007136m.g N
Si010911m.g Setaria italica Si010911m.g N
Si017318m.g Setaria italica Si017318m.g N
Solyc06g061240.2 Solanum lycopersicum Solyc06g061240.2 N
Solyc08g005100.2 Solanum lycopersicum Solyc08g005100.2 N
Solyc08g076860.2 Solanum lycopersicum Solyc08g076860.2 N
TCM_015701 Theobroma cacao TCM_015701 N
TCM_022356 Theobroma cacao TCM_022356 N
TCM_025548 Theobroma cacao TCM_025548 N
TCM_034802 Theobroma cacao TCM_034802 N
TCM_041560 Theobroma cacao TCM_041560 N
Traes_2AL_74EFA5757 Triticum aestivum Traes_2AL_74EFA5757 N
Traes_2BL_69847FCA6 Triticum aestivum Traes_2BL_69847FCA6 N
Traes_6DL_CF3557CFC Triticum aestivum Traes_6DL_CF3557CFC N
Traes_7DL_3547B7B9A Triticum aestivum Traes_7DL_3547B7B9A N
TRIUR3_12775 Triticum urartu TRIUR3_12775 N
TRIUR3_25489 Triticum urartu TRIUR3_25489 N
TRIUR3_30366 Triticum urartu TRIUR3_30366 N
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N
VIT_08s0007g04560 Vitis vinifera VIT_08s0007g04560 N
VIT_16s0039g01560 Vitis vinifera VIT_16s0039g01560 N
VIT_18s0122g00320 Vitis vinifera VIT_18s0122g00320 N
Ca_11235 Cicer arietinum Ca_11235 N
Ca_11505 Cicer arietinum Ca_11505 N
Ca_11837 Cicer arietinum Ca_11837 N
Ca_12361 Cicer arietinum Ca_12361 N
Cla008966 Citrullus lanatus Cla008966 N
Cla016461 Citrullus lanatus Cla016461 N
Pm022874 Prunus mume Pm022874 N
Pm023220 Prunus mume Pm023220 N
30054.m000824 Ricinus communis 30054.m000824 N
30073.m002298 Ricinus communis 30073.m002298 N
30078.m002228 Ricinus communis 30078.m002228 N
30170.m013811 Ricinus communis 30170.m013811 N
cassava13654.valid.m1 Manihot esculenta cassava13654.valid.m1 N
cassava13685.valid.m1 Manihot esculenta cassava13685.valid.m1 N
cassava15058.m1 Manihot esculenta cassava15058.m1 N
cassava2216.valid.m1 Manihot esculenta cassava2216.valid.m1 N
cassava22380.valid.m1 Manihot esculenta cassava22380.valid.m1 N
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N
cassava7406.valid.m1 Manihot esculenta cassava7406.valid.m1 N
cassava9017.m1 Manihot esculenta cassava9017.m1 N
Cucsa.313040 Cucumis sativus Cucsa.313040 N
Cucsa.321900 Cucumis sativus Cucsa.321900 N
e_gw1.1.253.1 Physcomitrella patens e_gw1.1.253.1 N
e_gw1.6.367.1 Physcomitrella patens e_gw1.6.367.1 N
estExt_gwp_gw1.C_1330066 Physcomitrella patens estExt_gwp_gw1.C_1330066 N
fgenesh1_pg.scaffold_102000043 Physcomitrella patens fgenesh1_pg.scaffold_102000043 N
mgf002787m Mimulus guttatus mgf002787m N
mgf004069m Mimulus guttatus mgf004069m N
mgf006925m Mimulus guttatus mgf006925m N
mgf023930m Mimulus guttatus mgf023930m N
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N
Aquca_009_01064 Aquilegia coerulea Aquca_009_01064 N
Aquca_019_00150 Aquilegia coerulea Aquca_019_00150 N
Aquca_095_00049 Aquilegia coerulea Aquca_095_00049 N
Bostr.12302s0015 Boechera stricta Bostr.12302s0015 N
Bostr.20129s0097 Boechera stricta Bostr.20129s0097 N
Bostr.28243s0064 Boechera stricta Bostr.28243s0064 N
Bostr.30275s0258 Boechera stricta Bostr.30275s0258 N
Bostr.3359s0088 Boechera stricta Bostr.3359s0088 N
Bostr.7128s0691 Boechera stricta Bostr.7128s0691 N
Cagra.0751s0029 Capsella grandiflora Cagra.0751s0029 N
Cagra.2281s0027 Capsella grandiflora Cagra.2281s0027 N
Cagra.3356s0083 Capsella grandiflora Cagra.3356s0083 N
Cagra.4962s0001 Capsella grandiflora Cagra.4962s0001 N
Cagra.7414s0001 Capsella grandiflora Cagra.7414s0001 N
Cagra.8320s0001 Capsella grandiflora Cagra.8320s0001 N
Carubv10005524m.g Capsella rubella Carubv10005524m.g N
Carubv10009696m.g Capsella rubella Carubv10009696m.g N
Carubv10009979m.g Capsella rubella Carubv10009979m.g N
Carubv10012331m.g Capsella rubella Carubv10012331m.g N
Carubv10020852m.g Capsella rubella Carubv10020852m.g N
Carubv10027053m.g Capsella rubella Carubv10027053m.g N
Ciclev10002292m.g Citrus clementina Ciclev10002292m.g N
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N
Ciclev10012756m.g Citrus clementina Ciclev10012756m.g N
Ciclev10030107m.g Citrus clementina Ciclev10030107m.g N
Ciclev10032089m.g Citrus clementina Ciclev10032089m.g N
Eucgr.B03915 Eucalyptus grandis Eucgr.B03915 N
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N
Eucgr.F01950 Eucalyptus grandis Eucgr.F01950 N
Eucgr.F03621 Eucalyptus grandis Eucgr.F03621 N
evm.TU.supercontig_43.104 Carica papaya evm.TU.supercontig_43.104 N
evm.TU.supercontig_5.128 Carica papaya evm.TU.supercontig_5.128 N
evm.TU.supercontig_71.62 Carica papaya evm.TU.supercontig_71.62 N
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N
gene02186-v1.0-hybrid Fragaria vesca gene02186-v1.0-hybrid N
gene29145-v1.0-hybrid Fragaria vesca gene29145-v1.0-hybrid N
Gorai.001G117900 Gossypium raimondii Gorai.001G117900 N
Gorai.003G056500 Gossypium raimondii Gorai.003G056500 N
Gorai.003G183000 Gossypium raimondii Gorai.003G183000 N
Gorai.004G184500 Gossypium raimondii Gorai.004G184500 N
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N
Gorai.006G217100 Gossypium raimondii Gorai.006G217100 N
Gorai.007G032400 Gossypium raimondii Gorai.007G032400 N
Gorai.008G226100 Gossypium raimondii Gorai.008G226100 N
Gorai.013G184000 Gossypium raimondii Gorai.013G184000 N
Lus10000482.g Linum usitatissimum Lus10000482.g N
Lus10000952.g Linum usitatissimum Lus10000952.g N
Lus10002700.g Linum usitatissimum Lus10002700.g N
Lus10004577.g Linum usitatissimum Lus10004577.g N
Lus10020337.g Linum usitatissimum Lus10020337.g N
Lus10023411.g Linum usitatissimum Lus10023411.g N
Lus10027735.g Linum usitatissimum Lus10027735.g N
Lus10030968.g Linum usitatissimum Lus10030968.g N
Lus10035554.g Linum usitatissimum Lus10035554.g N
Lus10040082.g Linum usitatissimum Lus10040082.g N
Lus10040292.g Linum usitatissimum Lus10040292.g N
MDP0000133007 Malus domestica MDP0000133007 N
MDP0000133008 Malus domestica MDP0000133008 N
MDP0000225862 Malus domestica MDP0000225862 N
MDP0000553473 Malus domestica MDP0000553473 N
MDP0000570901 Malus domestica MDP0000570901 N
orange1.1g025742m.g Citrus sinensis orange1.1g025742m.g N
orange1.1g026096m.g Citrus sinensis orange1.1g026096m.g N
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N
orange1.1g028382m.g Citrus sinensis orange1.1g028382m.g N
orange1.1g028583m.g Citrus sinensis orange1.1g028583m.g N
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N
Pavir.Da00498 Panicum virgatum Pavir.Da00498 N
Pavir.Db00732 Panicum virgatum Pavir.Db00732 N
Pavir.Ga00766 Panicum virgatum Pavir.Ga00766 N
Pavir.Gb00818 Panicum virgatum Pavir.Gb00818 N
SapurV1A.0016s0060 Salix purpurea SapurV1A.0016s0060 N
SapurV1A.0151s0140 Salix purpurea SapurV1A.0151s0140 N
SapurV1A.0182s0280 Salix purpurea SapurV1A.0182s0280 N
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N
SapurV1A.0554s0100 Salix purpurea SapurV1A.0554s0100 N
SapurV1A.0555s0010 Salix purpurea SapurV1A.0555s0010 N
SapurV1A.1141s0070 Salix purpurea SapurV1A.1141s0070 N
SapurV1A.1507s0030 Salix purpurea SapurV1A.1507s0030 N
SapurV1A.5427s0010 Salix purpurea SapurV1A.5427s0010 N
Thhalv10001013m.g Eutrema salsugineum Thhalv10001013m.g N
Thhalv10008598m.g Eutrema salsugineum Thhalv10008598m.g N
Thhalv10008750m.g Eutrema salsugineum Thhalv10008750m.g N
Thhalv10019067m.g Eutrema salsugineum Thhalv10019067m.g N
Thhalv10026159m.g Eutrema salsugineum Thhalv10026159m.g N
PK01309.1 Cannabis sativa PK01309.1 N
PK14253.1 Cannabis sativa PK14253.1 N
PK20928.1 Cannabis sativa PK20928.1 N
PK29286.1 Cannabis sativa PK29286.1 N
chr1.CM0591.460.nd Lotus japonicus chr1.CM0591.460.nd N
chr3.CM0127.220.nc Lotus japonicus chr3.CM0127.220.nc N
LjSGA_028172.2 Lotus japonicus LjSGA_028172.2 N