MDP0000517554 (Malus domestica)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 MDP0000517554 T024874_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000517554 BBR 202 512

Links

Other BBR family TFs
Other Malus domestica TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.150110 Cucumis sativus Cucsa.150110 N
Ciclev10021891m.g Citrus clementina Ciclev10021891m.g N
Carubv10005663m.g Capsella rubella Carubv10005663m.g N
Cagra.2997s0002 Capsella grandiflora Cagra.2997s0002 N
Bostr.2021s0045 Boechera stricta Bostr.2021s0045 N
mgf007349m Mimulus guttatus mgf007349m N
mgf003727m Mimulus guttatus mgf003727m N
mgf003491m Mimulus guttatus mgf003491m N
estExt_fgenesh1_pg.C_930051 Physcomitrella patens estExt_fgenesh1_pg.C_930051 N
e_gw1.317.27.1 Physcomitrella patens e_gw1.317.27.1 N
Eucgr.K02136 Eucalyptus grandis Eucgr.K02136 N
Cucsa.078000 Cucumis sativus Cucsa.078000 N
cassava6828.valid.m1 Manihot esculenta cassava6828.valid.m1 N
cassava38073.valid.m1 Manihot esculenta cassava38073.valid.m1 N
30217.m000254 Ricinus communis 30217.m000254 N
Pm020315 Prunus mume Pm020315 N
Cla015151 Citrullus lanatus Cla015151 N
Cla002744 Citrullus lanatus Cla002744 N
Ca_17230 Cicer arietinum Ca_17230 N
MDP0000300382 Malus domestica MDP0000300382 N
PDK_20s1512801g001 Phoenix dactylifera PDK_20s1512801g001 N
chr3.CM0423.200.nd Lotus japonicus chr3.CM0423.200.nd N
chr1.LjT46N10.100.nd Lotus japonicus chr1.LjT46N10.100.nd N
PK01824.1 Cannabis sativa PK01824.1 N
Thhalv10026242m.g Eutrema salsugineum Thhalv10026242m.g N
Pavir.J28064 Panicum virgatum Pavir.J28064 N
Pavir.Aa01947 Panicum virgatum Pavir.Aa01947 N
orange1.1g025914m.g Citrus sinensis orange1.1g025914m.g N
MDP0000675982 Malus domestica MDP0000675982 N
Ca_11707 Cicer arietinum Ca_11707 N
MDP0000129941 Malus domestica MDP0000129941 N
Lus10022769.g Linum usitatissimum Lus10022769.g N
Lus10011836.g Linum usitatissimum Lus10011836.g N
Gorai.007G156300 Gossypium raimondii Gorai.007G156300 N
Gorai.001G231300 Gossypium raimondii Gorai.001G231300 N
Gorai.001G188300 Gossypium raimondii Gorai.001G188300 N
Gorai.001G105100 Gossypium raimondii Gorai.001G105100 N
evm.TU.supercontig_21.106 Carica papaya evm.TU.supercontig_21.106 N
GLYMA18G33460 Glycine max GLYMA18G33460 N
OLONG_009588 Oryza longistaminata OLONG_009588 N
OGLUM02G17700 Oryza glumaepatula OGLUM02G17700 N
OBART02G17450 Oryza barthii OBART02G17450 N
OB02G25330 Oryza brachyantha OB02G25330 N
MTR_8g012655 Medicago truncatula MTR_8g012655 N
MTR_7g055857 Medicago truncatula MTR_7g055857 N
GSMUA_Achr9G01590_001 Musa acuminata GSMUA_Achr9G01590_001 N
GSMUA_Achr8G00300_001 Musa acuminata GSMUA_Achr8G00300_001 N
GSMUA_Achr6G06510_001 Musa acuminata GSMUA_Achr6G06510_001 N
ONIVA02G18870 Oryza nivara ONIVA02G18870 N
GLYMA08G46250 Glycine max GLYMA08G46250 N
F775_30629 Aegilops tauschii F775_30629 N
BRADI3G43822 Brachypodium distachyon BRADI3G43822 N
Bra034895 Brassica rapa Bra034895 N
Bo8g033910 Brassica oleracea Bo8g033910 N
Bo11579s010 Brassica oleracea Bo11579s010 N
BGIOSGA008254 Oryza indica BGIOSGA008254 N
AT4G13040 Arabidopsis thaliana AT4G13040 N
SELMODRAFT_420254 Selaginella moellendorffii SELMODRAFT_420254 N
VIT_00s0184g00010 Vitis vinifera VIT_00s0184g00010 N
TRIUR3_27883 Triticum urartu TRIUR3_27883 N
Traes_6DS_43372C0A6 Triticum aestivum Traes_6DS_43372C0A6 N
Traes_6AL_13895C140 Triticum aestivum Traes_6AL_13895C140 N
TCM_002835 Theobroma cacao TCM_002835 N
Solyc09g059510.2 Solanum lycopersicum Solyc09g059510.2 N
Si018306m.g Setaria italica Si018306m.g N
SELMODRAFT_443366 Selaginella moellendorffii SELMODRAFT_443366 N
AMTR_s00013p00252260 Amborella trichopoda AMTR_s00013p00252260 N
Sb04g020150 Sorghum bicolor Sb04g020150 N
PRUPE_ppa011812mg Prunus persica PRUPE_ppa011812mg N
POPTR_0002s24750 Populus trichocarpa POPTR_0002s24750 N
PGSC0003DMG400017485 Solanum tuberosum PGSC0003DMG400017485 N
OS02G0499000 Oryza sativa OS02G0499000 N
ORUFI02G18290 Oryza rufipogon ORUFI02G18290 N
ORGLA02G0152600 Oryza glaberrima ORGLA02G0152600 N
OPUNC02G15530 Oryza punctata OPUNC02G15530 N