ENSSTOG00000014237 (Ictidomys tridecemlineatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSSTOG00000014237 T037510_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tfe3
M01715_2.00 		Mus musculus
NCDCRTGAYN
NRTCAYGHGN		 PBM
Weirauch et al.(2014)
pTH5057 		0.914 1.000
Tfe3
M05833_2.00 		Mus musculus
CACGTGAY
RTCACGTG		 SMiLE-seq
Isakova et al.(2017)
TFE3 		0.914 1.000
Tfe3
M08743_2.00 		Mus musculus
TCACGTGACH
DGTCACGTGA		 Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A 		0.914 1.000
Tfe3
M09884_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TFEA_01 		0.914 1.000
Mitf
M01741_2.00 		Mus musculus
NCDCGTGAYN
NRTCACGHGN		 PBM
Weirauch et al.(2014)
pTH5465 		0.914 0.981
MITF
M08058_2.00 		Homo sapiens
NNNDRTCACGTGAYHNNN
NNNDRTCACGTGAYHNNN		 ChIP-seq
Mathelier et al.(2014)
MA0620.2 		0.914 0.981
MITF
M08740_2.00 		Homo sapiens
YCAYGTGACH
DGTCACRTGR		 Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A 		0.914 0.981
Mitf
M08765_2.00 		Mus musculus
BCHYGTGACY
RGTCACRDGV		 Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A 		0.914 0.981
Mitf
M09475_2.00 		Mus musculus
GTCACRWGVB
VBCWYGTGAC		 Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085 		0.914 0.981
MITF
M09880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q4 		0.914 0.981
MITF
M09881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q6 		0.914 0.981
TFE3
M02773_2.00 		Homo sapiens
VNCACGTGMY
RKCACGTGNB		 SELEX
Jolma et al.(2013)
TFE3_1 		0.871 0.981
TFE3
M04058_2.00 		Homo sapiens
YVCACGTGAYN
NRTCACGTGBR		 SELEX
Yin et al.(2017)
TFE3_eDBD_HT-SELEX 		0.871 0.981
TFE3
M08709_2.00 		Homo sapiens
TCACGTGACH
DGTCACGTGA		 Misc
Kulakovskiy et al.(2013)
TFE3_HUMAN.H11MO.0.B 		0.871 0.981
TFE3
M09790_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TFEA_Q6 		0.871 0.981
TFE3
M04059_2.00 		Homo sapiens
NRTCACATGBB
VVCATGTGAYN		 SELEX
Yin et al.(2017)
TFE3_eDBD_Methyl-HT-SELEX 		0.871 0.981
Tfec
M00755_2.00 		Mus musculus
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2013)
pTH2885 		0.870 0.907
Tfec
M01736_2.00 		Mus musculus
NCNCRTGVYN
NRBCAYGNGN		 PBM
Weirauch et al.(2014)
pTH5065 		0.870 0.907
TFEC
M02778_2.00 		Homo sapiens
RNCACRTGAB
VTCAYGTGNY		 SELEX
Jolma et al.(2013)
TFEC_1 		0.870 0.889
TFEC
M04078_2.00 		Homo sapiens
NVCACGTGACN
NGTCACGTGBN		 SELEX
Yin et al.(2017)
TFEC_eDBD_HT-SELEX 		0.870 0.889
TFEC
M04079_2.00 		Homo sapiens
VNCATGTGAYN
NRTCACATGNB		 SELEX
Yin et al.(2017)
TFEC_eDBD_Methyl-HT-SELEX 		0.870 0.889
Tfeb
M01728_2.00 		Mus musculus
CWCGTGAY
RTCACGWG		 PBM
Weirauch et al.(2014)
pTH5072 		0.855 0.870
TFEB
M02781_2.00 		Homo sapiens
RNCACGTGAY
RTCACGTGNY		 SELEX
Jolma et al.(2013)
TFEB_1 		0.855 0.870
TFEB
M02727_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Jolma et al.(2010)
TFEB_dimer 		0.855 0.870
TFEB
M04088_2.00 		Homo sapiens
YVCACGTGAYN
NRTCACGTGBR		 SELEX
Yin et al.(2017)
TFEB_eDBD_HT-SELEX 		0.855 0.870
TFEB
M08718_2.00 		Homo sapiens
CACGTGAYY
RRTCACGTG		 Misc
Kulakovskiy et al.(2013)
TFEB_HUMAN.H11MO.0.C 		0.855 0.870
Tfeb
M08753_2.00 		Mus musculus
CACGTGAYY
RRTCACGTG		 Misc
Kulakovskiy et al.(2013)
TFEB_MOUSE.H11MO.0.C 		0.855 0.870
TFEB
M04089_2.00 		Homo sapiens
VNCATGTGAYN
NRTCACATGNB		 SELEX
Yin et al.(2017)
TFEB_eDBD_Methyl-HT-SELEX 		0.855 0.870
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000012760 bHLH 347 400

Links

Other bHLH family TFs
Other Ictidomys tridecemlineatus TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00007p00170710 Amborella trichopoda AMTR_s00007p00170710 I 0.000
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.000
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.000
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.000
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I 0.000
Aquca_004_00748 Aquilegia coerulea Aquca_004_00748 I 0.000
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.000
Cla019977 Citrullus lanatus Cla019977 I 0.000
VIT_08s0040g01240 Vitis vinifera VIT_08s0040g01240 I 0.000
TRIUR3_31897 Triticum urartu TRIUR3_31897 I 0.000
Traes_4DL_7BD3165FB Triticum aestivum Traes_4DL_7BD3165FB I 0.000
Traes_4BL_A2B32FCEE Triticum aestivum Traes_4BL_A2B32FCEE I 0.000
Traes_4AS_DD16F89E7 Triticum aestivum Traes_4AS_DD16F89E7 I 0.000
MLOC_66385 Hordeum vulgare MLOC_66385 I 0.000
F775_10096 Aegilops tauschii F775_10096 I 0.000
AMTR_s00002p00019320 Amborella trichopoda AMTR_s00002p00019320 I 0.000
Cagra.0578s0007 Capsella grandiflora Cagra.0578s0007 N 0.000
evm.TU.supercontig_92.83 Carica papaya evm.TU.supercontig_92.83 N 0.000
Bo3g035410 Brassica oleracea Bo3g035410 N 0.000
Eucgr.A02230 Eucalyptus grandis Eucgr.A02230 N 0.000
Ciclev10012626m.g Citrus clementina Ciclev10012626m.g N 0.000
Carubv10023903m.g Capsella rubella Carubv10023903m.g N 0.000
Carubv10017947m.g Capsella rubella Carubv10017947m.g N 0.000
Cagra.1642s0077 Capsella grandiflora Cagra.1642s0077 N 0.000
Gorai.007G352300 Gossypium raimondii Gorai.007G352300 N 0.000
Bostr.9345s0019 Boechera stricta Bostr.9345s0019 N 0.000
Bostr.20505s0075 Boechera stricta Bostr.20505s0075 N 0.000
Bo4g012960 Brassica oleracea Bo4g012960 N 0.000
Bo4g112750 Brassica oleracea Bo4g112750 N 0.000
mgf009382m Mimulus guttatus mgf009382m N 0.000
Cucsa.340200 Cucumis sativus Cucsa.340200 N 0.000
gene14814-v1.0-hybrid Fragaria vesca gene14814-v1.0-hybrid N 0.000
Bo4g190700 Brassica oleracea Bo4g190700 N 0.000
Lus10018020.g Linum usitatissimum Lus10018020.g N 0.000
Lus10042017.g Linum usitatissimum Lus10042017.g N 0.000
MDP0000138102 Malus domestica MDP0000138102 N 0.000
MDP0000213892 Malus domestica MDP0000213892 N 0.000
orange1.1g026479m.g Citrus sinensis orange1.1g026479m.g N 0.000
Pavir.J02699 Panicum virgatum Pavir.J02699 N 0.000
Pavir.J24868 Panicum virgatum Pavir.J24868 N 0.000
SapurV1A.0159s0020 Salix purpurea SapurV1A.0159s0020 N 0.000
SapurV1A.0189s0140 Salix purpurea SapurV1A.0189s0140 N 0.000
BHLH106 Arabidopsis thaliana AT2G41130 N 0.000
Thhalv10006410m.g Eutrema salsugineum Thhalv10006410m.g N 0.000
Thhalv10017546m.g Eutrema salsugineum Thhalv10017546m.g N 0.000
PK23387.1 Cannabis sativa PK23387.1 N 0.000
chr1.CM0816.330.nc Lotus japonicus chr1.CM0816.330.nc N 0.000
Sb01g003830 Sorghum bicolor Sb01g003830 N 0.000
GLYMA19G30910 Glycine max GLYMA19G30910 N 0.000
GRMZM2G027068 Zea mays GRMZM2G027068 N 0.000
GSMUA_Achr8G23980_001 Musa acuminata GSMUA_Achr8G23980_001 N 0.000
LPERR03G32730 Leersia perrieri LPERR03G32730 N 0.000
GLYMA02G23590 Glycine max GLYMA02G23590 N 0.000
OGLUM03G38250 Oryza glumaepatula OGLUM03G38250 N 0.000
OMERI03G35360 Oryza meridionalis OMERI03G35360 N 0.000
ONIVA03G40100 Oryza nivara ONIVA03G40100 N 0.000
OPUNC03G35590 Oryza punctata OPUNC03G35590 N 0.000
ORGLA03G0352000 Oryza glaberrima ORGLA03G0352000 N 0.000
ORUFI03G40090 Oryza rufipogon ORUFI03G40090 N 0.000
OS03G0811400 Oryza sativa OS03G0811400 N 0.000
PGSC0003DMG400008378 Solanum tuberosum PGSC0003DMG400008378 N 0.000
POPTR_0006s03550 Populus trichocarpa POPTR_0006s03550 N 0.000
POPTR_0016s03460 Populus trichocarpa POPTR_0016s03460 N 0.000
GLYMA03G28150 Glycine max GLYMA03G28150 N 0.000
scaffold_402920.1 Arabidopsis lyrata scaffold_402920.1 N 0.000
Solyc10g078380.1 Solanum lycopersicum Solyc10g078380.1 N 0.000
TCM_024016 Theobroma cacao TCM_024016 N 0.000
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N 0.000
BRADI1G04280 Brachypodium distachyon BRADI1G04280 N 0.000
Traes_5BL_CBFAD4B59 Triticum aestivum Traes_5BL_CBFAD4B59 N 0.000
Bra016951 Brassica rapa Bra016951 N 0.000
Bra014672 Brassica rapa Bra014672 N 0.000
Ca_07159 Cicer arietinum Ca_07159 N 0.000
Cla017413 Citrullus lanatus Cla017413 N 0.000
Bra004599 Brassica rapa Bra004599 N 0.000
Pm025589 Prunus mume Pm025589 N 0.000
30180.m001071 Ricinus communis 30180.m001071 N 0.000
cassava7163.valid.m1 Manihot esculenta cassava7163.valid.m1 N 0.000