POPTR_0004s16560 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0004s16560 T066946_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP53
M06779_2.00 		Arabidopsis thaliana
DNWGMTGACGTGKCV
BGMCACGTCAKCWNH		 Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a 		0.819 0.532
BZIP53
M06780_2.00 		Arabidopsis thaliana
DDWGMTGACGTGGMV
BKCCACGTCAKCWHH		 Dap-seq
OMalley et al.(2016)
bZIP53_col 		0.819 0.532
ATBZIP42
M06775_2.00 		Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_col_a 		0.811 0.548
ATBZIP42
M06776_2.00 		Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a 		0.811 0.548
OS02G0728001
M01826_2.00 		Oryza sativa
NHCACGTGKNN
NNMCACGTGDN		 PBM
Weirauch et al.(2014)
pTH8334 		0.789 0.516
OS02G0728001
M01827_2.00 		Oryza sativa
WSACGTGG
CCACGTSW		 PBM
Weirauch et al.(2014)
pTH8737 		0.789 0.516
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0004s16560.1 bZIP 27 88

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

211 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.811
BZIP53 Arabidopsis thaliana AT3G62420 D 0.819
OS02G0728001 Oryza sativa OS02G0728001 D 0.789
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.789
BGIOSGA008968 Oryza indica BGIOSGA008968 I 0.789
Bo2g012800 Brassica oleracea Bo2g012800 I 0.803
Bo3g010620 Brassica oleracea Bo3g010620 I 0.812
Bo3g010750 Brassica oleracea Bo3g010750 I 0.810
Bo6g079450 Brassica oleracea Bo6g079450 I 0.819
Bo8g097830 Brassica oleracea Bo8g097830 I 0.816
Bo9g163740 Brassica oleracea Bo9g163740 I 0.803
Bra003500 Brassica rapa Bra003500 I 0.819
Bra006324 Brassica rapa Bra006324 I 0.810
Bra007679 Brassica rapa Bra007679 I 0.816
Bra008670 Brassica rapa Bra008670 I 0.803
Bra023540 Brassica rapa Bra023540 I 0.803
Bra039631 Brassica rapa Bra039631 I 0.814
ATBZIP53 Arabidopsis lyrata fgenesh2_kg.5__2740__AT3G62420.1 I 0.819
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.803
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.816
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.811
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.816
GLYMA04G01210 Glycine max GLYMA04G01210 I 0.824
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.812
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.808
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.885
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.885
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.812
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.830
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.788
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.836
GSMUA_Achr10G20720_001 Musa acuminata GSMUA_Achr10G20720_001 I 0.806
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.849
GSMUA_Achr11G20700_001 Musa acuminata GSMUA_Achr11G20700_001 I 0.843
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.863
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I 0.820
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I 0.837
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.883
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I 0.825
GSMUA_Achr9G14690_001 Musa acuminata GSMUA_Achr9G14690_001 I 0.790
MLOC_62430 Hordeum vulgare MLOC_62430 I 0.785
MTR_4g097440 Medicago truncatula MTR_4g097440 I 0.803
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.811
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.821
MTR_8g015250 Medicago truncatula MTR_8g015250 I 0.801
OBART02G31030 Oryza barthii OBART02G31030 I 0.789
OGLUM02G31690 Oryza glumaepatula OGLUM02G31690 I 0.789
OLONG_004835 Oryza longistaminata OLONG_004835 I 0.789
OMERI02G29910 Oryza meridionalis OMERI02G29910 I 0.789
ONIVA02G34180 Oryza nivara ONIVA02G34180 I 0.789
OPUNC02G28720 Oryza punctata OPUNC02G28720 I 0.789
ORGLA02G0265300 Oryza glaberrima ORGLA02G0265300 I 0.789
ORUFI02G32700 Oryza rufipogon ORUFI02G32700 I 0.789
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.807
PGSC0003DMG400003529 Solanum tuberosum PGSC0003DMG400003529 I 0.837
PGSC0003DMG400003701 Solanum tuberosum PGSC0003DMG400003701 I 0.810
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I 0.783
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I 0.817
PGSC0003DMG400022589 Solanum tuberosum PGSC0003DMG400022589 I 0.815
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.885
POPTR_0002s19720 Populus trichocarpa POPTR_0002s19720 I 0.821
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.819
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.816
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.887
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.814
POPTR_0014s11590 Populus trichocarpa POPTR_0014s11590 I 0.810
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I 0.803
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.846
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.821
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.825
SELMODRAFT_17884 Selaginella moellendorffii SELMODRAFT_17884 I 0.795
SELMODRAFT_17886 Selaginella moellendorffii SELMODRAFT_17886 I 0.795
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.832
Solyc02g084860.1 Solanum lycopersicum Solyc02g084860.1 I 0.837
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I 0.818
Solyc03g033730.1 Solanum lycopersicum Solyc03g033730.1 I 0.796
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I 0.797
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.807
TCM_000835 Theobroma cacao TCM_000835 I 0.845
Traes_6AL_E0ED0DE45 Triticum aestivum Traes_6AL_E0ED0DE45 I 0.785
Traes_6DL_77ACE1279 Triticum aestivum Traes_6DL_77ACE1279 I 0.785
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.816
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.885
Ca_01004 Cicer arietinum Ca_01004 I 0.805
Ca_03512 Cicer arietinum Ca_03512 I 0.796
Ca_09362 Cicer arietinum Ca_09362 I 0.819
Ca_17416 Cicer arietinum Ca_17416 I 0.792
Cla005975 Citrullus lanatus Cla005975 I 0.812
Cla015037 Citrullus lanatus Cla015037 I 0.782
Cla016748 Citrullus lanatus Cla016748 I 0.829
Cla016841 Citrullus lanatus Cla016841 I 0.867
Cla020641 Citrullus lanatus Cla020641 I 0.819
Pm002353 Prunus mume Pm002353 I 0.846
Pm015434 Prunus mume Pm015434 I 0.825
30076.m004659 Ricinus communis 30076.m004659 I 0.823
30131.m007078 Ricinus communis 30131.m007078 I 0.888
30138.m003866 Ricinus communis 30138.m003866 I 0.816
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I 0.810
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.888
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.816
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.809
cassava36049.valid.m1 Manihot esculenta cassava36049.valid.m1 I 0.798
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.865
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.833
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.816
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.825
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.856
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.825
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.829
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.819
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.782
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.792
mgf003466m Mimulus guttatus mgf003466m I 0.849
mgf007535m Mimulus guttatus mgf007535m I 0.783
mgf013074m Mimulus guttatus mgf013074m I 0.783
mgf017392m Mimulus guttatus mgf017392m I 0.830
mgf018581m Mimulus guttatus mgf018581m I 0.874
mgf021986m Mimulus guttatus mgf021986m I 0.785
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I 0.817
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.829
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.834
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I 0.817
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.803
Cagra.0483s0006 Capsella grandiflora Cagra.0483s0006 I 0.819
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.808
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.808
Carubv10018852m.g Capsella rubella Carubv10018852m.g I 0.819
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I 0.807
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.846
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.878
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.802
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.846
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.811
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I 0.817
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I 0.815
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.885
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.816
gene08757-v1.0-hybrid Fragaria vesca gene08757-v1.0-hybrid I 0.787
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.872
Gorai.001G144200 Gossypium raimondii Gorai.001G144200 I 0.810
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.816
Gorai.002G126500 Gossypium raimondii Gorai.002G126500 I 0.814
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.850
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.804
Gorai.007G122800 Gossypium raimondii Gorai.007G122800 I 0.801
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I 0.839
Gorai.008G085200 Gossypium raimondii Gorai.008G085200 I 0.817
Lus10010005.g Linum usitatissimum Lus10010005.g I 0.826
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.831
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.821
Lus10025024.g Linum usitatissimum Lus10025024.g I 0.826
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.821
Lus10040428.g Linum usitatissimum Lus10040428.g I 0.846
MDP0000183562 Malus domestica MDP0000183562 I 0.812
MDP0000205823 Malus domestica MDP0000205823 I 0.864
MDP0000239026 Malus domestica MDP0000239026 I 0.869
MDP0000738631 Malus domestica MDP0000738631 I 0.828
MDP0000863909 Malus domestica MDP0000863909 I 0.834
MDP0000891108 Malus domestica MDP0000891108 I 0.812
MDP0000891899 Malus domestica MDP0000891899 I 0.791
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.846
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.807
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.802
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.878
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.813
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.815
SapurV1A.0158s0220 Salix purpurea SapurV1A.0158s0220 I 0.821
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I 0.837
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.832
SapurV1A.3521s0020 Salix purpurea SapurV1A.3521s0020 I 0.821
Thhalv10006418m.g Eutrema salsugineum Thhalv10006418m.g I 0.819
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.803
PK03779.1 Cannabis sativa PK03779.1 I 0.800
PK07533.1 Cannabis sativa PK07533.1 I 0.872
PK09738.1 Cannabis sativa PK09738.1 I 0.785
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.815
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.816
AMTR_s00014p00097990 Amborella trichopoda AMTR_s00014p00097990 N 0.814
GSMUA_Achr4G06440_001 Musa acuminata GSMUA_Achr4G06440_001 N 0.789
OB05G12090 Oryza brachyantha OB05G12090 N 0.792
PGSC0003DMG400005476 Solanum tuberosum PGSC0003DMG400005476 N 0.793
POPTR_0014s00790 Populus trichocarpa POPTR_0014s00790 N 0.787
Si023562m.g Setaria italica Si023562m.g N 0.794
VIT_07s0005g01450 Vitis vinifera VIT_07s0005g01450 N 0.787
VIT_18s0001g13040 Vitis vinifera VIT_18s0001g13040 N 0.807
Ca_15971 Cicer arietinum Ca_15971 N 0.789
Cla022814 Citrullus lanatus Cla022814 N 0.826
28976.m000155 Ricinus communis 28976.m000155 N 0.800
cassava1498.valid.m1 Manihot esculenta cassava1498.valid.m1 N 0.810
cassava42526.valid.m1 Manihot esculenta cassava42526.valid.m1 N 0.800
Cucsa.043170 Cucumis sativus Cucsa.043170 N 0.786
Cucsa.248080 Cucumis sativus Cucsa.248080 N 0.803
mgf004063m Mimulus guttatus mgf004063m N 0.822
mgf022473m Mimulus guttatus mgf022473m N 0.805
Aquca_024_00067 Aquilegia coerulea Aquca_024_00067 N 0.802
Ciclev10002731m.g Citrus clementina Ciclev10002731m.g N 0.839
Eucgr.F01867 Eucalyptus grandis Eucgr.F01867 N 0.815
Eucgr.G01645 Eucalyptus grandis Eucgr.G01645 N 0.823
Eucgr.L01789 Eucalyptus grandis Eucgr.L01789 N 0.823
Gorai.012G155000 Gossypium raimondii Gorai.012G155000 N 0.810
Lus10001347.g Linum usitatissimum Lus10001347.g N 0.827
Lus10019273.g Linum usitatissimum Lus10019273.g N 0.807
Lus10024279.g Linum usitatissimum Lus10024279.g N 0.851
MDP0000261154 Malus domestica MDP0000261154 N 0.797
orange1.1g041765m.g Citrus sinensis orange1.1g041765m.g N 0.839
Pavir.Ca00746 Panicum virgatum Pavir.Ca00746 N 0.795
Pavir.J06041 Panicum virgatum Pavir.J06041 N 0.783
SapurV1A.0235s0220 Salix purpurea SapurV1A.0235s0220 N 0.793
SapurV1A.0608s0130 Salix purpurea SapurV1A.0608s0130 N 0.791
PK01815.1 Cannabis sativa PK01815.1 N 0.801
PK06492.1 Cannabis sativa PK06492.1 N 0.784