fosb (Xenopus tropicalis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 XB-GENE-6258697 T073083_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOS
M04327_2.00 		Homo sapiens
BRTGACGTCAYV
BRTGACGTCAYV		 SELEX
Yin et al.(2017)
FOS_eDBD_HT-SELEX 		0.896 0.746
FOS
M08069_2.00 		Homo sapiens
DVTGASTCATN
NATGASTCABH		 ChIP-seq
Mathelier et al.(2014)
MA0476.1 		0.896 0.746
FOS
M07826_2.00 		Homo sapiens
NATGASTCABDBN
NVHVTGASTCATN		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CFOS_Stanford 		0.896 0.746
FOS
M07827_2.00 		Homo sapiens
MTGASTCAYHN
NDRTGASTCAK		 ChIP-seq
Gerstein et al.(2012)
HUVEC_CFOS_UCD 		0.896 0.746
FOS
M07828_2.00 		Homo sapiens
BDRTGASTCAYNBHB
VDVNRTGASTCAYHV		 ChIP-seq
Gerstein et al.(2012)
K562_CFOS_UChicago 		0.896 0.746
FOS
M08802_2.00 		Homo sapiens
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
FOS_HUMAN.H11MO.0.A 		0.896 0.746
Fos
M08819_2.00 		Mus musculus
NRTGACTCAYNN
NNRTGAGTCAYN		 Misc
Kulakovskiy et al.(2013)
FOS_MOUSE.H11MO.0.A 		0.896 0.746
FOS
M09988_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CFOS_Q4 		0.896 0.746
FOS
M09989_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CFOS_Q6 		0.896 0.746
FOS
M09990_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOS_02 		0.896 0.746
FOS
M09991_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOS_03 		0.896 0.746
FOS
M04328_2.00 		Homo sapiens
VATGACRTCAYM
KRTGAYGTCATB		 SELEX
Yin et al.(2017)
FOS_eDBD_Methyl-HT-SELEX 		0.896 0.746
FOSB
M04272_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
FOSB_eDBD_HT-SELEX 		0.888 0.810
FOSB
M08795_2.00 		Homo sapiens
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
FOSB_HUMAN.H11MO.0.A 		0.888 0.810
Fosb
M08814_2.00 		Mus musculus
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
FOSB_MOUSE.H11MO.0.A 		0.888 0.810
FOSB
M04273_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
FOSB_eDBD_Methyl-HT-SELEX 		0.888 0.810
Fosl2
M01809_2.00 		Mus musculus
GATGACKH
DMGTCATC		 PBM
Weirauch et al.(2014)
pTH5108 		0.881 0.746
Fosl2
M08828_2.00 		Mus musculus
NVTGACTCABN
NVTGAGTCABN		 Misc
Kulakovskiy et al.(2013)
FOSL2_MOUSE.H11MO.0.A 		0.881 0.746
Fosl2
M09494_2.00 		Mus musculus
NNVTGASTCABN
NVTGASTCABNN		 Misc
Heinz et al.(2010)
3T3L1-Fosl2_GSE56872 		0.881 0.746
Fosl1
M01805_2.00 		Mus musculus
NNRTGACKYMN
NKRMGTCAYNN		 PBM
Weirauch et al.(2014)
pTH5077 		0.814 0.762
FOSL1
M04333_2.00 		Homo sapiens
NRTGAWTCAYN
NRTGAWTCAYN		 SELEX
Yin et al.(2017)
FOSL1_FL_HT-SELEX_1 		0.814 0.762
FOSL1
M04334_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
FOSL1_FL_HT-SELEX_2 		0.814 0.762
FOSL1
M04335_2.00 		Homo sapiens
DRTGAYRCR
YGYRTCAYH		 SELEX
Yin et al.(2017)
FOSL1_FL_HT-SELEX_3 		0.814 0.762
FOSL1
M04035_2.00 		Homo sapiens
RTGACGTCAY
RTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
FOSL1.1 		0.814 0.762
FOSL1
M04036_2.00 		Homo sapiens
GTCAYCRRTGAC
GTCAYYGRTGAC		 SELEX
Rodriguez-Martinez et al.(2017)
FOSL1.2 		0.814 0.762
FOSL1
M08071_2.00 		Homo sapiens
DRTGASTCAKV
BMTGASTCAYH		 ChIP-seq
Mathelier et al.(2014)
MA0477.1 		0.814 0.762
FOSL1
M07833_2.00 		Homo sapiens
NDRTGASTCAB
VTGASTCAYHN		 ChIP-seq
Gerstein et al.(2012)
K562_FOSL1_HudsonAlpha 		0.814 0.762
FOSL1
M08805_2.00 		Homo sapiens
NVTGACTCABNN
NNVTGAGTCABN		 Misc
Kulakovskiy et al.(2013)
FOSL1_HUMAN.H11MO.0.A 		0.814 0.762
Fosl1
M08821_2.00 		Mus musculus
NVTGACTCABNN
NNVTGAGTCABN		 Misc
Kulakovskiy et al.(2013)
FOSL1_MOUSE.H11MO.0.A 		0.814 0.762
FOSL1
M09490_2.00 		Homo sapiens
NNVTGASTCABN
NVTGASTCABNN		 Misc
Heinz et al.(2010)
BT549-Fra1_GSE46166 		0.814 0.762
FOSL1
M10000_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOSL1_01 		0.814 0.762
FOSL1
M10001_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FRA1_Q5 		0.814 0.762
FOSL1
M10002_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FRA1_Q6_01 		0.814 0.762
FOSL1
M10003_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FRA1_Q6 		0.814 0.762
FOSL1
M04336_2.00 		Homo sapiens
BRTGASTCATV
BATGASTCAYV		 SELEX
Yin et al.(2017)
FOSL1_FL_Methyl-HT-SELEX_1 		0.814 0.762
FOSL1
M04337_2.00 		Homo sapiens
NRTSACGTCAYN
NRTGACGTSAYN		 SELEX
Yin et al.(2017)
FOSL1_FL_Methyl-HT-SELEX_2 		0.814 0.762
FOSL1
M04338_2.00 		Homo sapiens
RATGAYRCR
YGYRTCATY		 SELEX
Yin et al.(2017)
FOSL1_FL_Methyl-HT-SELEX_3 		0.814 0.762
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002932681 bZIP 133 195

Links

Other bZIP family TFs
Other Xenopus tropicalis TFs

279 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G42280 Arabidopsis thaliana AT2G42280 D
mgf005043m Mimulus guttatus mgf005043m I
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I
Cucsa.094340 Cucumis sativus Cucsa.094340 I
cassava35513.valid.m1 Manihot esculenta cassava35513.valid.m1 I
30169.m006403 Ricinus communis 30169.m006403 I
30149.m000231 Ricinus communis 30149.m000231 I
Pm007619 Prunus mume Pm007619 I
Ca_14007 Cicer arietinum Ca_14007 I
Ca_07284 Cicer arietinum Ca_07284 I
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I
VIT_05s0124g00240 Vitis vinifera VIT_05s0124g00240 I
TRIUR3_33816 Triticum urartu TRIUR3_33816 I
TRIUR3_16394 Triticum urartu TRIUR3_16394 I
Traes_6DL_62A15AED6 Triticum aestivum Traes_6DL_62A15AED6 I
Traes_6BL_868408DFC Triticum aestivum Traes_6BL_868408DFC I
Traes_6AL_9437F730F Triticum aestivum Traes_6AL_9437F730F I
TRAES3BF135900010CFD_g Triticum aestivum TRAES3BF135900010CFD_g I
Traes_3AL_B68C491B0 Triticum aestivum Traes_3AL_B68C491B0 I
TCM_020066 Theobroma cacao TCM_020066 I
Solyc09g098110.2 Solanum lycopersicum Solyc09g098110.2 I
Si001123m.g Setaria italica Si001123m.g I
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I
Sb03g042860 Sorghum bicolor Sb03g042860 I
PRUPE_ppa025178mg Prunus persica PRUPE_ppa025178mg I
PDK_20s1546591g001 Phoenix dactylifera PDK_20s1546591g001 I
Lus10025518.g Linum usitatissimum Lus10025518.g I
BHLH128 Arabidopsis thaliana AT1G05805 I
chr5.LjT42F22.20.nc Lotus japonicus chr5.LjT42F22.20.nc I
PK07850.1 Cannabis sativa PK07850.1 I
Thhalv10016998m.g Eutrema salsugineum Thhalv10016998m.g I
SapurV1A.0529s0060 Salix purpurea SapurV1A.0529s0060 I
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I
Pavir.J01306 Panicum virgatum Pavir.J01306 I
orange1.1g038558m.g Citrus sinensis orange1.1g038558m.g I
MDP0000307685 Malus domestica MDP0000307685 I
MDP0000273574 Malus domestica MDP0000273574 I
Lus10026733.g Linum usitatissimum Lus10026733.g I
Bostr.25219s0385 Boechera stricta Bostr.25219s0385 I
Gorai.011G144600 Gossypium raimondii Gorai.011G144600 I
Eucgr.A00213 Eucalyptus grandis Eucgr.A00213 I
Ciclev10020681m.g Citrus clementina Ciclev10020681m.g I
Carubv10023683m.g Capsella rubella Carubv10023683m.g I
Carubv10023498m.g Capsella rubella Carubv10023498m.g I
Carubv10009382m.g Capsella rubella Carubv10009382m.g I
Cagra.3706s0004 Capsella grandiflora Cagra.3706s0004 I
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I
Cagra.1671s0210 Capsella grandiflora Cagra.1671s0210 I
Bostr.25993s0551 Boechera stricta Bostr.25993s0551 I
Bostr.25993s0461 Boechera stricta Bostr.25993s0461 I
BRADI3G48070 Brachypodium distachyon BRADI3G48070 I
LPERR08G16800 Leersia perrieri LPERR08G16800 I
LPERR04G13560 Leersia perrieri LPERR04G13560 I
LPERR01G35240 Leersia perrieri LPERR01G35240 I
GSMUA_Achr8G32130_001 Musa acuminata GSMUA_Achr8G32130_001 I
GSMUA_Achr8G01370_001 Musa acuminata GSMUA_Achr8G01370_001 I
GSMUA_Achr1G27710_001 Musa acuminata GSMUA_Achr1G27710_001 I
GRMZM2G114873 Zea mays GRMZM2G114873 I
GLYMA20G39220 Glycine max GLYMA20G39220 I
fgenesh2_kg.4__2475__AT2G43140.1 Arabidopsis lyrata fgenesh2_kg.4__2475__AT2G43140.1 I
fgenesh2_kg.1__542__AT1G05805.1 Arabidopsis lyrata fgenesh2_kg.1__542__AT1G05805.1 I
F775_26506 Aegilops tauschii F775_26506 I
F775_24576 Aegilops tauschii F775_24576 I
LPERR09G10800 Leersia perrieri LPERR09G10800 I
BRADI2G57800 Brachypodium distachyon BRADI2G57800 I
Bra015456 Brassica rapa Bra015456 I
Bra004748 Brassica rapa Bra004748 I
Bra000291 Brassica rapa Bra000291 I
Bo5g007030 Brassica oleracea Bo5g007030 I
Bo5g006980 Brassica oleracea Bo5g006980 I
Bo4g019620 Brassica oleracea Bo4g019620 I
Bo3g036400 Brassica oleracea Bo3g036400 I
BGIOSGA016651 Oryza indica BGIOSGA016651 I
BGIOSGA004992 Oryza indica BGIOSGA004992 I
AT2G43140 Arabidopsis thaliana AT2G43140 I
OMERI01G37660 Oryza meridionalis OMERI01G37660 I
OS04G0489600 Oryza sativa OS04G0489600 I
OS01G0900800 Oryza sativa OS01G0900800 I
ORUFI04G18350 Oryza rufipogon ORUFI04G18350 I
ORUFI01G44010 Oryza rufipogon ORUFI01G44010 I
ORGLA04G0140000 Oryza glaberrima ORGLA04G0140000 I
ORGLA01G0346300 Oryza glaberrima ORGLA01G0346300 I
OPUNC04G14700 Oryza punctata OPUNC04G14700 I
OPUNC01G39450 Oryza punctata OPUNC01G39450 I
ONIVA04G15000 Oryza nivara ONIVA04G15000 I
ONIVA01G45730 Oryza nivara ONIVA01G45730 I
OMERI04G14260 Oryza meridionalis OMERI04G14260 I
PGSC0003DMG400006569 Solanum tuberosum PGSC0003DMG400006569 I
OLONG_004619 Oryza longistaminata OLONG_004619 I
OGLUM04G16920 Oryza glumaepatula OGLUM04G16920 I
OGLUM01G44860 Oryza glumaepatula OGLUM01G44860 I
OBART04G16900 Oryza barthii OBART04G16900 I
OBART01G40680 Oryza barthii OBART01G40680 I
OB04G24170 Oryza brachyantha OB04G24170 I
OB01G49420 Oryza brachyantha OB01G49420 I
MTR_7g092540 Medicago truncatula MTR_7g092540 I
MTR_1g116790 Medicago truncatula MTR_1g116790 I
MLOC_20318 Hordeum vulgare MLOC_20318 I
MLOC_12058 Hordeum vulgare MLOC_12058 I