BN946_scf185044.g2 (Trametes cinnabarina)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 BN946_scf185044.g2 T081694_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CaO19.723
M01037_2.00 		Candida albicans
VCCCCTKD
HMAGGGGB		 PBM
Siggers et al.(2014)
Bcr1_Orf19.723Calb 		0.781 0.756
NCU05064
M01883_2.00 		Neurospora crassa
NNYMCCTKD
HMAGGKRNN		 PBM
Weirauch et al.(2014)
pTH8949 		0.766 0.778
HCBG_02507
M01447_2.00 		Histoplasma capsulatum
NNCCCCTKD
HMAGGGGNN		 PBM
Najafabadi et al.(2015a)
pTH10217 		0.766 0.756
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CDO68094 C2H2 ZF 41 66
CDO68094 C2H2 ZF 72 94

Links

Other C2H2 ZF family TFs
Other Trametes cinnabarina TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N
AT1G31040 Arabidopsis thaliana AT1G31040 N
AT2G12646 Arabidopsis thaliana AT2G12646 N
BGIOSGA007009 Oryza indica BGIOSGA007009 N
BGIOSGA007635 Oryza indica BGIOSGA007635 N
BGIOSGA023427 Oryza indica BGIOSGA023427 N
Bo2g121040 Brassica oleracea Bo2g121040 N
Bo7g041160 Brassica oleracea Bo7g041160 N
Bra014899 Brassica rapa Bra014899 N
Bra038403 Brassica rapa Bra038403 N
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N
BRADI3G06190 Brachypodium distachyon BRADI3G06190 N
F775_02274 Aegilops tauschii F775_02274 N
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N
fgenesh2_kg.3__2996__AT2G12646.1 Arabidopsis lyrata fgenesh2_kg.3__2996__AT2G12646.1 N
GLYMA01G17580 Glycine max GLYMA01G17580 N
GLYMA05G26271 Glycine max GLYMA05G26271 N
GLYMA08G09191 Glycine max GLYMA08G09191 N
GLYMA09G05781 Glycine max GLYMA09G05781 N
GLYMA09G12330 Glycine max GLYMA09G12330 N
GLYMA11G17770 Glycine max GLYMA11G17770 N
GLYMA13G23360 Glycine max GLYMA13G23360 N
GLYMA15G17040 Glycine max GLYMA15G17040 N
GLYMA15G23920 Glycine max GLYMA15G23920 N
GLYMA17G11470 Glycine max GLYMA17G11470 N
GRMZM2G017882 Zea mays GRMZM2G017882 N
GRMZM2G070295 Zea mays GRMZM2G070295 N
GSMUA_Achr11G04210_001 Musa acuminata GSMUA_Achr11G04210_001 N
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N
GSMUA_Achr6G20140_001 Musa acuminata GSMUA_Achr6G20140_001 N
GSMUA_Achr6G30690_001 Musa acuminata GSMUA_Achr6G30690_001 N
GSMUA_Achr6G35220_001 Musa acuminata GSMUA_Achr6G35220_001 N
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N
LPERR02G04770 Leersia perrieri LPERR02G04770 N
LPERR02G05550 Leersia perrieri LPERR02G05550 N
LPERR06G19930 Leersia perrieri LPERR06G19930 N
MLOC_21744 Hordeum vulgare MLOC_21744 N
MLOC_37403 Hordeum vulgare MLOC_37403 N
OB02G14750 Oryza brachyantha OB02G14750 N
OB02G15630 Oryza brachyantha OB02G15630 N
OBART02G05520 Oryza barthii OBART02G05520 N
OBART06G24000 Oryza barthii OBART06G24000 N
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N
OLONG_011712 Oryza longistaminata OLONG_011712 N
OMERI06G23930 Oryza meridionalis OMERI06G23930 N
ONIVA02G05860 Oryza nivara ONIVA02G05860 N
ONIVA03G43780 Oryza nivara ONIVA03G43780 N
OPUNC02G04680 Oryza punctata OPUNC02G04680 N
OPUNC02G05490 Oryza punctata OPUNC02G05490 N
OPUNC06G21750 Oryza punctata OPUNC06G21750 N
ORGLA02G0058300 Oryza glaberrima ORGLA02G0058300 N
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N
OS02G0172800 Oryza sativa OS02G0172800 N
OS02G0183000 Oryza sativa OS02G0183000 N
OS06G0666100 Oryza sativa OS06G0666100 N
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N
PRUPE_ppa019806mg Prunus persica PRUPE_ppa019806mg N
PRUPE_ppa023785mg Prunus persica PRUPE_ppa023785mg N
PRUPE_ppa024886mg Prunus persica PRUPE_ppa024886mg N
Sb04g004830 Sorghum bicolor Sb04g004830 N
Sb04g005680 Sorghum bicolor Sb04g005680 N
Sb10g026620 Sorghum bicolor Sb10g026620 N
scaffold_303520.1 Arabidopsis lyrata scaffold_303520.1 N
Si018139m.g Setaria italica Si018139m.g N
Si019544m.g Setaria italica Si019544m.g N
Solyc01g091000.2 Solanum lycopersicum Solyc01g091000.2 N
Solyc02g068510.1 Solanum lycopersicum Solyc02g068510.1 N
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N
TCM_005554 Theobroma cacao TCM_005554 N
TCM_006017 Theobroma cacao TCM_006017 N
Traes_6AS_3CC6C63F9 Triticum aestivum Traes_6AS_3CC6C63F9 N
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N
Traes_6BS_A7DE5BFD1 Triticum aestivum Traes_6BS_A7DE5BFD1 N
Traes_6DS_9C50DA0DE Triticum aestivum Traes_6DS_9C50DA0DE N
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N
TRIUR3_16881 Triticum urartu TRIUR3_16881 N
TRIUR3_33737 Triticum urartu TRIUR3_33737 N
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N
VIT_15s0048g00580 Vitis vinifera VIT_15s0048g00580 N
Ca_06740 Cicer arietinum Ca_06740 N
Cla010042 Citrullus lanatus Cla010042 N
Pm010795 Prunus mume Pm010795 N
Pm017841 Prunus mume Pm017841 N
Pm027672 Prunus mume Pm027672 N
29417.m000034 Ricinus communis 29417.m000034 N
30090.m000247 Ricinus communis 30090.m000247 N
cassava11490.m1 Manihot esculenta cassava11490.m1 N
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N
Cucsa.048750 Cucumis sativus Cucsa.048750 N
Cucsa.132770 Cucumis sativus Cucsa.132770 N
Aquca_013_00703 Aquilegia coerulea Aquca_013_00703 N
Aquca_016_00081 Aquilegia coerulea Aquca_016_00081 N
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N
Bostr.22685s0001 Boechera stricta Bostr.22685s0001 N
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N
Cagra.2506s0001 Capsella grandiflora Cagra.2506s0001 N
Carubv10011663m.g Capsella rubella Carubv10011663m.g N
Carubv10015124m.g Capsella rubella Carubv10015124m.g N
Ciclev10010747m.g Citrus clementina Ciclev10010747m.g N
Ciclev10016385m.g Citrus clementina Ciclev10016385m.g N
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N
Eucgr.E04309 Eucalyptus grandis Eucgr.E04309 N
evm.TU.supercontig_30.133 Carica papaya evm.TU.supercontig_30.133 N
gene30812-v1.0-hybrid Fragaria vesca gene30812-v1.0-hybrid N
Gorai.004G110400 Gossypium raimondii Gorai.004G110400 N
MDP0000197021 Malus domestica MDP0000197021 N
MDP0000639526 Malus domestica MDP0000639526 N
MDP0000891068 Malus domestica MDP0000891068 N
orange1.1g042361m.g Citrus sinensis orange1.1g042361m.g N
orange1.1g048158m.g Citrus sinensis orange1.1g048158m.g N
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N
Pavir.Da00255 Panicum virgatum Pavir.Da00255 N
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N
Pavir.J35161 Panicum virgatum Pavir.J35161 N
SapurV1A.0104s0310 Salix purpurea SapurV1A.0104s0310 N
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N
PK01122.1 Cannabis sativa PK01122.1 N
PK04104.1 Cannabis sativa PK04104.1 N
PK19037.1 Cannabis sativa PK19037.1 N
chr6.CM0037.1230.nd Lotus japonicus chr6.CM0037.1230.nd N
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N
PDK_20s1397531g003 Phoenix dactylifera PDK_20s1397531g003 N
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N