CRE13956 (Caenorhabditis remanei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CRE13956 T085001_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu-1
M00637_2.00 		Caenorhabditis elegans
CDCCCMCV
BGKGGGHG		 PBM
Narasimhan et al.(2015)
pTH9355 		0.821 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE13956 C2H2 ZF 326 349
CRE13956 C2H2 ZF 363 385
CRE13956 C2H2 ZF 391 413
CRE13956 C2H2 ZF 419 441

Links

Other C2H2 ZF family TFs
Other Caenorhabditis remanei TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
klu-1 Caenorhabditis elegans WBGene00013970 D 0.821
EEL_0000130601 Elaeophora elaphi EEL_0000130601 I 0.764
SVE_1611300 Strongyloides venezuelensis SVE_1611300 I 0.756
SPAL_0000289400 Strongyloides papillosus SPAL_0000289400 I 0.756
nLs.2.1.2.g02913 Litomosoides sigmodontis nLs.2.1.2.g02913 I 0.761
nDi.2.2.2.g07689 Dirofilaria immitis nDi.2.2.2.g07689 I 0.764
nAv.1.0.1.g02699 Acanthocheilonema viteae nAv.1.0.1.g02699 I 0.764
MhA1_Contig3096.frz3.gene1 Meloidogyne hapla MhA1_Contig3096.frz3.gene1 I 0.761
MhA1_Contig1668.frz3.gene4 Meloidogyne hapla MhA1_Contig1668.frz3.gene4 I 0.761
L898_g5287 Steinernema monticolum L898_g5287 I 0.761
L892_g30369 Steinernema scapterisci L892_g30369 I 0.761
L596_g19227 Steinernema carpocapsae L596_g19227 I 0.761
HCOI02146900 Haemonchus contortus HCOI02146900 I 0.776
GPLIN_001505900 Globodera pallida GPLIN_001505900 I 0.757
Bm9026 Brugia malayi Bm9026 I 0.764
CGOC_0000202301 Cylicostephanus goldi CGOC_0000202301 I 0.778
BXY_0483000 Bursaphelenchus xylophilus BXY_0483000 I 0.773
ASU_11043 Ascaris suum ASU_11043 I 0.761
ANCCAN_10701 Ancylostoma caninum ANCCAN_10701 I 0.778
WBGene00248644 Onchocerca volvulus WBGene00248644 I 0.764
LOAG_17546 Loa loa LOAG_17546 I 0.764
CJA16091 Caenorhabditis japonica CJA16091 I 0.812
CBN30915 Caenorhabditis brenneri CBN30915 I 0.824
CBN12312 Caenorhabditis brenneri CBN12312 I 0.824
CBG19812 Caenorhabditis briggsae CBG19812 I 0.824