ZNF335 (Oryctolagus cuniculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOCUG00000016059 T103137_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF335
M08952_2.00 		Homo sapiens
RGSTGYCYNNNSHDNTGCCTGH
DCAGGCANHDSNNNRGRCASCY		 Misc
Kulakovskiy et al.(2013)
ZN335_HUMAN.H11MO.0.A 		0.827 0.991
Zfp335
M08998_2.00 		Mus musculus
RGSTGYCYNNNSHDNTGCCTGH
DCAGGCANHDSNNNRGRCASCY		 Misc
Kulakovskiy et al.(2013)
ZN335_MOUSE.H11MO.0.A 		0.814 0.961
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000013819 C2H2 ZF 494 516
ENSOCUP00000013819 C2H2 ZF 522 544
ENSOCUP00000013819 C2H2 ZF 561 583
ENSOCUP00000013819 C2H2 ZF 589 611
ENSOCUP00000013819 C2H2 ZF 620 642
ENSOCUP00000013819 C2H2 ZF 677 700
ENSOCUP00000013819 C2H2 ZF 1018 1040
ENSOCUP00000013819 C2H2 ZF 1046 1068
ENSOCUP00000013819 C2H2 ZF 1074 1096
ENSOCUP00000013819 C2H2 ZF 1102 1125

Links

Other C2H2 ZF family TFs
Other Oryctolagus cuniculus TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ERF019 Arabidopsis thaliana AT1G22810 D
evm.TU.supercontig_21.63 Carica papaya evm.TU.supercontig_21.63 I
29938.m000611 Ricinus communis 29938.m000611 I
mgf010891m Mimulus guttatus mgf010891m I
Bostr.10273s0198 Boechera stricta Bostr.10273s0198 I
Bostr.12659s0135 Boechera stricta Bostr.12659s0135 I
Cagra.0114s0023 Capsella grandiflora Cagra.0114s0023 I
Cagra.2418s0007 Capsella grandiflora Cagra.2418s0007 I
Carubv10011955m.g Capsella rubella Carubv10011955m.g I
Carubv10022408m.g Capsella rubella Carubv10022408m.g I
Ciclev10023345m.g Citrus clementina Ciclev10023345m.g I
Eucgr.F02967 Eucalyptus grandis Eucgr.F02967 I
cassava8476.m1 Manihot esculenta cassava8476.m1 I
Lus10006179.g Linum usitatissimum Lus10006179.g I
Lus10009468.g Linum usitatissimum Lus10009468.g I
Lus10041044.g Linum usitatissimum Lus10041044.g I
orange1.1g045327m.g Citrus sinensis orange1.1g045327m.g I
SapurV1A.2173s0020 Salix purpurea SapurV1A.2173s0020 I
SapurV1A.3847s0010 Salix purpurea SapurV1A.3847s0010 I
SapurV1A.4200s0010 Salix purpurea SapurV1A.4200s0010 I
Thhalv10009842m.g Eutrema salsugineum Thhalv10009842m.g I
Thhalv10019510m.g Eutrema salsugineum Thhalv10019510m.g I
chr2.CM0018.340.nd Lotus japonicus chr2.CM0018.340.nd I
GLYMA11G01700 Glycine max GLYMA11G01700 I
ERF020 Arabidopsis thaliana AT1G71520 I
Bo2g072950 Brassica oleracea Bo2g072950 I
Bo5g038890 Brassica oleracea Bo5g038890 I
Bo6g113060 Brassica oleracea Bo6g113060 I
Bo7g057680 Brassica oleracea Bo7g057680 I
Bra007974 Brassica rapa Bra007974 I
Bra012345 Brassica rapa Bra012345 I
Bra016133 Brassica rapa Bra016133 I
Bra024539 Brassica rapa Bra024539 I
fgenesh2_kg.2__1411__AT1G71520.1 Arabidopsis lyrata fgenesh2_kg.2__1411__AT1G71520.1 I
MTR_5g008790 Medicago truncatula MTR_5g008790 I
POPTR_0013s10420 Populus trichocarpa POPTR_0013s10420 I
POPTR_0019s10220 Populus trichocarpa POPTR_0019s10220 I
scaffold_102587.1 Arabidopsis lyrata scaffold_102587.1 I
TCM_036224 Theobroma cacao TCM_036224 I
Ca_15055 Cicer arietinum Ca_15055 I
PGSC0003DMG400008734 Solanum tuberosum PGSC0003DMG400008734 N
GSMUA_Achr10G04450_001 Musa acuminata GSMUA_Achr10G04450_001 N
Pm004265 Prunus mume Pm004265 N
GLYMA01G44230 Glycine max GLYMA01G44230 N
gene27062-v1.0-hybrid Fragaria vesca gene27062-v1.0-hybrid N
PRUPE_ppa020605mg Prunus persica PRUPE_ppa020605mg N
MDP0000932292 Malus domestica MDP0000932292 N
Aquca_001_00483 Aquilegia coerulea Aquca_001_00483 N
Solyc01g057080.1 Solanum lycopersicum Solyc01g057080.1 N
Cucsa.088640 Cucumis sativus Cucsa.088640 N
cassava9593.m1 Manihot esculenta cassava9593.m1 N