CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp358
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000000974
T108858_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000001289
C2H2 ZF
241
263
FSCPDCGRAFRRSSGLSQHRRTH
ENSRNOP00000001289
C2H2 ZF
269
291
YRCPDCGKSFSHGATLAQHRGIH
ENSRNOP00000001289
C2H2 ZF
297
319
YQCAACGKAFGWRSTLLKHRSSH
ENSRNOP00000001289
C2H2 ZF
325
347
HHCPVCGKAFGHGSLLAQHLRTH
ENSRNOP00000001289
C2H2 ZF
353
375
HKCPVCAKGFGQGSALLKHLRTH
ENSRNOP00000001289
C2H2 ZF
381
403
YPCPQCGKAFGQSSALLQHQRTH
ENSRNOP00000001289
C2H2 ZF
409
431
YRCPHCGKAFGQSSNLQHHLRIH
ENSRNOP00000001289
C2H2 ZF
437
459
YACPHCSKAFGQSSALLQHLHVH
ENSRNOP00000001289
C2H2 ZF
465
487
YRCQLCGKAFGQASSLTKHKRVH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_489.5
Carica papaya
evm.TU.supercontig_489.5
N
Pm010610
Prunus mume
Pm010610
N
27996.m000153
Ricinus communis
27996.m000153
N
cassava27522.m1
Manihot esculenta
cassava27522.m1
N
cassava8426.m1
Manihot esculenta
cassava8426.m1
N
Cucsa.167440
Cucumis sativus
Cucsa.167440
N
mgf020354m
Mimulus guttatus
mgf020354m
N
Aquca_003_00697
Aquilegia coerulea
Aquca_003_00697
N
Aquca_020_00213
Aquilegia coerulea
Aquca_020_00213
N
Bostr.15697s0367
Boechera stricta
Bostr.15697s0367
N
Bostr.23794s0621
Boechera stricta
Bostr.23794s0621
N
Cagra.1508s0136
Capsella grandiflora
Cagra.1508s0136
N
Carubv10011063m.g
Capsella rubella
Carubv10011063m.g
N
Ciclev10017579m.g
Citrus clementina
Ciclev10017579m.g
N
Eucgr.D01630
Eucalyptus grandis
Eucgr.D01630
N
Cla020055
Citrullus lanatus
Cla020055
N
evm.TU.supercontig_489.6
Carica papaya
evm.TU.supercontig_489.6
N
gene18542-v1.0-hybrid
Fragaria vesca
gene18542-v1.0-hybrid
N
Gorai.002G107000
Gossypium raimondii
Gorai.002G107000
N
Gorai.005G218900
Gossypium raimondii
Gorai.005G218900
N
Lus10005451.g
Linum usitatissimum
Lus10005451.g
N
Lus10038432.g
Linum usitatissimum
Lus10038432.g
N
MDP0000209483
Malus domestica
MDP0000209483
N
MDP0000216053
Malus domestica
MDP0000216053
N
MDP0000280921
Malus domestica
MDP0000280921
N
orange1.1g041370m.g
Citrus sinensis
orange1.1g041370m.g
N
SapurV1A.0602s0120
Salix purpurea
SapurV1A.0602s0120
N
Thhalv10009765m.g
Eutrema salsugineum
Thhalv10009765m.g
N
Thhalv10017751m.g
Eutrema salsugineum
Thhalv10017751m.g
N
PGSC0003DMG400020812
Solanum tuberosum
PGSC0003DMG400020812
N
AMTR_s00011p00235740
Amborella trichopoda
AMTR_s00011p00235740
N
BHLH52
Arabidopsis thaliana
AT1G30670
N
BHLH53
Arabidopsis thaliana
AT2G34820
N
Bo3g028090
Brassica oleracea
Bo3g028090
N
Bo4g039270
Brassica oleracea
Bo4g039270
N
Bra005389
Brassica rapa
Bra005389
N
Bra022993
Brassica rapa
Bra022993
N
fgenesh1_pm.C_scaffold_1002485
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002485
N
GLYMA08G17747
Glycine max
GLYMA08G17747
N
GLYMA15G41400
Glycine max
GLYMA15G41400
N
GSMUA_Achr11G16900_001
Musa acuminata
GSMUA_Achr11G16900_001
N
GSMUA_AchrUn_randomG20690_001
Musa acuminata
GSMUA_AchrUn_randomG20690_001
N
MTR_1g060700
Medicago truncatula
MTR_1g060700
N
MTR_2g067000
Medicago truncatula
MTR_2g067000
N
Al_scaffold_0004_1965
Arabidopsis lyrata
Al_scaffold_0004_1965
N
PGSC0003DMG400044874
Solanum tuberosum
PGSC0003DMG400044874
N
POPTR_0001s46530
Populus trichocarpa
POPTR_0001s46530
N
POPTR_0011s16100
Populus trichocarpa
POPTR_0011s16100
N
PRUPE_ppa017597mg
Prunus persica
PRUPE_ppa017597mg
N
PRUPE_ppa025945mg
Prunus persica
PRUPE_ppa025945mg
N
Si038598m.g
Setaria italica
Si038598m.g
N
Solyc08g075090.2
Solanum lycopersicum
Solyc08g075090.2
N
Solyc08g075110.1
Solanum lycopersicum
Solyc08g075110.1
N
TCM_027032
Theobroma cacao
TCM_027032
N
TCM_033386
Theobroma cacao
TCM_033386
N
VIT_10s0092g00030
Vitis vinifera
VIT_10s0092g00030
N
Ca_13608
Cicer arietinum
Ca_13608
N
Ca_13610
Cicer arietinum
Ca_13610
N