ENSXMAG00000004898 (Xiphophorus maculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSXMAG00000004898 T113773_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EGR2
M00233_2.00 		Homo sapiens
HDCCCMCDBN
NVHGKGGGHD		 PBM
Barrera et al.(2016)
EGR2_REF 		0.773 0.884
Egr2
M00778_2.00 		Mus musculus
YRCCCMCGYN
NRCGKGGGYR		 PBM
Weirauch et al.(2013)
pTH3091 		0.773 0.884
EGR2
M02885_2.00 		Homo sapiens
MCGCCCACGCD
HGCGTGGGCGK		 SELEX
Jolma et al.(2013)
EGR2_1 		0.773 0.884
EGR2
M02886_2.00 		Homo sapiens
NNMCGCCCACGCDNN
NNHGCGTGGGCGKNN		 SELEX
Jolma et al.(2013)
EGR2_2 		0.773 0.884
EGR2
M04439_2.00 		Homo sapiens
HMCRCCCACGCNN
NNGCGTGGGYGKD		 SELEX
Yin et al.(2017)
EGR2_FL_HT-SELEX 		0.773 0.884
EGR2
M08302_2.00 		Homo sapiens
CDCCCMCDC
GHGKGGGHG		 ChIP-seq
Schmitges et al.(2016)
P11161_1-3.RCADE 		0.773 0.884
EGR2
M08884_2.00 		Homo sapiens
YYCCDCCCMCDCHYHYHY
RDRDRDGHGKGGGHGGRR		 Misc
Kulakovskiy et al.(2013)
EGR2_HUMAN.H11MO.0.A 		0.773 0.884
Egr2
M08994_2.00 		Mus musculus
BHYCCDCCCMCDCN
NGHGKGGGHGGRDV		 Misc
Kulakovskiy et al.(2013)
EGR2_MOUSE.H11MO.0.A 		0.773 0.884
Egr2
M09515_2.00 		Mus musculus
NMCRCCCACDSN
NSHGTGGGYGKN		 Misc
Heinz et al.(2010)
Thymocytes-Egr2_GSE34254 		0.773 0.884
EGR2
M10197_2.00 		Homo sapiens
MCGCCYACGCAH
DTGCGTRGGCGK		 Transfac
Matys et al.(2006)
V$EGR2_01 		0.773 0.884
EGR2
M10198_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR2_Q4 		0.773 0.884
EGR2
M10199_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR2_Q6 		0.773 0.884
EGR2
M04440_2.00 		Homo sapiens
NMCGCCCACRCRN
NYGYGTGGGCGKN		 SELEX
Yin et al.(2017)
EGR2_FL_Methyl-HT-SELEX 		0.773 0.884
EGR2
M00232_2.00 		Homo sapiens
NHMCGCCYNN
NNRGGCGKDN		 PBM
Barrera et al.(2016)
EGR2_R409W 		0.772 0.870
Egr1
M01864_2.00 		Mus musculus
CCCMCGYNN
NNRCGKGGG		 PBM
Weirauch et al.(2014)
pTH5337 		0.762 0.884
Egr1
M00375_2.00 		Mus musculus
NCCYMCDNN
NNHGKRGGN		 PBM
Berger et al.(2006)
Zif268 		0.762 0.884
EGR1
M02883_2.00 		Homo sapiens
NMCGCCCMCGCANN
NNTGCGKGGGCGKN		 SELEX
Jolma et al.(2013)
EGR1_1 		0.762 0.884
EGR1
M02884_2.00 		Homo sapiens
HMCGCCCACGCAHW
WDTGCGTGGGCGKD		 SELEX
Jolma et al.(2013)
EGR1_2 		0.762 0.884
Egr1
M02932_2.00 		Mus musculus
HHMCGCCCMCBCAHHH
DDDTGVGKGGGCGKDD		 SELEX
Jolma et al.(2013)
Egr1_1 		0.762 0.884
EGR1
M04437_2.00 		Homo sapiens
NNCRCCCMCRCNN
NNGYGKGGGYGNN		 SELEX
Yin et al.(2017)
EGR1_eDBD_HT-SELEX 		0.762 0.884
Egr1
M05860_2.00 		Mus musculus
NNMCRCCCMCGCN
NGCGKGGGYGKNN		 SMiLE-seq
Isakova et al.(2017)
EGR1 		0.762 0.884
EGR1
M07927_2.00 		Homo sapiens
NVBNNNNBCCGCCCMCGCNB
VNGCGKGGGCGGVNNNNVBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_EGR1_HudsonAlpha 		0.762 0.884
EGR1
M07928_2.00 		Homo sapiens
BNCCGCCCMCGCNBB
VVNGCGKGGGCGGNV		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_EGR1_HudsonAlpha 		0.762 0.884
EGR1
M07929_2.00 		Homo sapiens
NNNNNNBNNCCRCCCMCGCN
NGCGKGGGYGGNNVNNNNNN		 ChIP-seq
Gerstein et al.(2012)
K562_EGR1_HudsonAlpha 		0.762 0.884
EGR1
M08882_2.00 		Homo sapiens
BHNCCDCCCMCDCHBNB
VNVDGHGKGGGHGGNDV		 Misc
Kulakovskiy et al.(2013)
EGR1_HUMAN.H11MO.0.A 		0.762 0.884
Egr1
M08996_2.00 		Mus musculus
YYCCRCCCMCGCNB
VNGCGKGGGYGGRR		 Misc
Kulakovskiy et al.(2013)
EGR1_MOUSE.H11MO.0.A 		0.762 0.884
EGR1
M09506_2.00 		Homo sapiens
CRCCCMCRCA
TGYGKGGGYG		 Misc
Heinz et al.(2010)
K562-Egr1_GSE32465 		0.762 0.884
EGR1
M10188_2.00 		Homo sapiens
MCGCCYACGCAW
WTGCGTRGGCGK		 Transfac
Matys et al.(2006)
V$EGR1_01 		0.762 0.884
EGR1
M10189_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_02 		0.762 0.884
EGR1
M10190_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_09 		0.762 0.884
EGR1
M10191_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_11 		0.762 0.884
EGR1
M10192_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_12 		0.762 0.884
EGR1
M10193_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_13 		0.762 0.884
EGR1
M10194_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_15 		0.762 0.884
EGR1
M10195_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_Q3 		0.762 0.884
EGR1
M10196_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR1_Q6 		0.762 0.884
EGR1
M04438_2.00 		Homo sapiens
NHCDCCCMCNYNN
NNRNGKGGGHGDN		 SELEX
Yin et al.(2017)
EGR1_eDBD_Methyl-HT-SELEX 		0.762 0.884
Egr3
M00776_2.00 		Mus musculus
HHDCCCMCDN
NHGKGGGHDD		 PBM
Weirauch et al.(2013)
pTH2820 		0.761 0.870
EGR3
M02915_2.00 		Homo sapiens
NHMCGCCCMCGCAHN
NDTGCGKGGGCGKDN		 SELEX
Jolma et al.(2013)
EGR3_1 		0.761 0.870
Egr3
M02931_2.00 		Mus musculus
HMCGCCCACGCAHWN
NWDTGCGTGGGCGKD		 SELEX
Jolma et al.(2013)
Egr3_1 		0.761 0.870
EGR3
M04583_2.00 		Homo sapiens
HMCGCCCACGCRH
DYGCGTGGGCGKD		 SELEX
Yin et al.(2017)
EGR3_FL_HT-SELEX 		0.761 0.870
EGR3
M08349_2.00 		Homo sapiens
CDCCYCCDC
GHGGRGGHG		 ChIP-seq
Schmitges et al.(2016)
Q06889_1-3.RCADE 		0.761 0.870
EGR3
M10279_2.00 		Homo sapiens
MCGCCYACGCWN
NWGCGTRGGCGK		 Transfac
Matys et al.(2006)
V$EGR3_01 		0.761 0.870
EGR3
M10280_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR3_Q3 		0.761 0.870
EGR3
M10281_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EGR3_Q6 		0.761 0.870
EGR3
M04584_2.00 		Homo sapiens
NMCGCCCACGCRH
DYGCGTGGGCGKN		 SELEX
Yin et al.(2017)
EGR3_FL_Methyl-HT-SELEX 		0.761 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000004909 C2H2 ZF 206 230
ENSXMAP00000004909 C2H2 ZF 236 258
ENSXMAP00000004909 C2H2 ZF 264 286

Links

Other C2H2 ZF family TFs
Other Xiphophorus maculatus TFs

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ERF012 Arabidopsis thaliana AT1G21910 D 0.000
ERF014 Arabidopsis thaliana AT1G44830 D 0.000
BGIOSGA005542 Oryza indica BGIOSGA005542 I 0.000
BGIOSGA011061 Oryza indica BGIOSGA011061 I 0.000
BGIOSGA022531 Oryza indica BGIOSGA022531 I 0.000
Bo5g034880 Brassica oleracea Bo5g034880 I 0.000
Bo6g004620 Brassica oleracea Bo6g004620 I 0.000
Bo6g121400 Brassica oleracea Bo6g121400 I 0.000
Bo8g071150 Brassica oleracea Bo8g071150 I 0.000
Bra012298 Brassica rapa Bra012298 I 0.000
Bra015660 Brassica rapa Bra015660 I 0.000
Bra016400 Brassica rapa Bra016400 I 0.000
Bra036022 Brassica rapa Bra036022 I 0.000
Bra040309 Brassica rapa Bra040309 I 0.000
BRADI1G46120 Brachypodium distachyon BRADI1G46120 I 0.000
BRADI1G67350 Brachypodium distachyon BRADI1G67350 I 0.000
BRADI3G57867 Brachypodium distachyon BRADI3G57867 I 0.000
F775_17148 Aegilops tauschii F775_17148 I 0.000
F775_20580 Aegilops tauschii F775_20580 I 0.000
DREB26 Arabidopsis lyrata fgenesh2_kg.1__2381__AT1G21910.1 I 0.000
fgenesh2_kg.1__3777__AT1G44830.1 Arabidopsis lyrata fgenesh2_kg.1__3777__AT1G44830.1 I 0.000
GLYMA04G43040 Glycine max GLYMA04G43040 I 0.000
GLYMA06G11700 Glycine max GLYMA06G11700 I 0.000
GLYMA13G02860 Glycine max GLYMA13G02860 I 0.000
GLYMA14G22970 Glycine max GLYMA14G22970 I 0.000
GRMZM2G007406 Zea mays GRMZM2G007406 I 0.000
GRMZM2G011110 Zea mays GRMZM2G011110 I 0.000
GRMZM2G015281 Zea mays GRMZM2G015281 I 0.000
GRMZM2G021369 Zea mays GRMZM2G021369 I 0.000
GRMZM2G084264 Zea mays GRMZM2G084264 I 0.000
GSMUA_Achr10G19460_001 Musa acuminata GSMUA_Achr10G19460_001 I 0.000
GSMUA_Achr10G25270_001 Musa acuminata GSMUA_Achr10G25270_001 I 0.000
GSMUA_Achr10G30100_001 Musa acuminata GSMUA_Achr10G30100_001 I 0.000
GSMUA_Achr8G23240_001 Musa acuminata GSMUA_Achr8G23240_001 I 0.000
LPERR02G27720 Leersia perrieri LPERR02G27720 I 0.000
LPERR03G10190 Leersia perrieri LPERR03G10190 I 0.000
LPERR06G06370 Leersia perrieri LPERR06G06370 I 0.000
MLOC_70931 Hordeum vulgare MLOC_70931 I 0.000
MTR_3g072610 Medicago truncatula MTR_3g072610 I 0.000
MTR_5g058470 Medicago truncatula MTR_5g058470 I 0.000
OB03G21640 Oryza brachyantha OB03G21640 I 0.000
OBART03G11470 Oryza barthii OBART03G11470 I 0.000
OBART06G07000 Oryza barthii OBART06G07000 I 0.000
OGLUM02G34320 Oryza glumaepatula OGLUM02G34320 I 0.000
OGLUM06G07380 Oryza glumaepatula OGLUM06G07380 I 0.000
OMERI02G32260 Oryza meridionalis OMERI02G32260 I 0.000
OMERI03G10750 Oryza meridionalis OMERI03G10750 I 0.000
OMERI06G08130 Oryza meridionalis OMERI06G08130 I 0.000
ONIVA02G33600 Oryza nivara ONIVA02G33600 I 0.000
ONIVA03G12660 Oryza nivara ONIVA03G12660 I 0.000
ONIVA06G08290 Oryza nivara ONIVA06G08290 I 0.000
OPUNC02G31280 Oryza punctata OPUNC02G31280 I 0.000
OPUNC03G11030 Oryza punctata OPUNC03G11030 I 0.000
OPUNC06G06600 Oryza punctata OPUNC06G06600 I 0.000
ORGLA03G0110800 Oryza glaberrima ORGLA03G0110800 I 0.000
ORGLA06G0065100 Oryza glaberrima ORGLA06G0065100 I 0.000
ORUFI03G11820 Oryza rufipogon ORUFI03G11820 I 0.000
OS02G0767800 Oryza sativa OS02G0767800 I 0.000
OS03G0263000 Oryza sativa OS03G0263000 I 0.000
PGSC0003DMG400000910 Solanum tuberosum PGSC0003DMG400000910 I 0.000
POPTR_0002s08610 Populus trichocarpa POPTR_0002s08610 I 0.000
POPTR_0005s15830 Populus trichocarpa POPTR_0005s15830 I 0.000
PRUPE_ppa010649mg Prunus persica PRUPE_ppa010649mg I 0.000
Sb01g040280 Sorghum bicolor Sb01g040280 I 0.000
Sb04g034290 Sorghum bicolor Sb04g034290 I 0.000
Sb10g006980 Sorghum bicolor Sb10g006980 I 0.000
Si007977m.g Setaria italica Si007977m.g I 0.000
Si039170m.g Setaria italica Si039170m.g I 0.000
Solyc11g012980.1 Solanum lycopersicum Solyc11g012980.1 I 0.000
TCM_035077 Theobroma cacao TCM_035077 I 0.000
Traes_4AS_18663793B Triticum aestivum Traes_4AS_18663793B I 0.000
Traes_4BL_762F09E09 Triticum aestivum Traes_4BL_762F09E09 I 0.000
Traes_4DL_FB8B5AAEB Triticum aestivum Traes_4DL_FB8B5AAEB I 0.000
VIT_18s0001g03240 Vitis vinifera VIT_18s0001g03240 I 0.000
Ca_25824 Cicer arietinum Ca_25824 I 0.000
Cla014165 Citrullus lanatus Cla014165 I 0.000
Cla023512 Citrullus lanatus Cla023512 I 0.000
Pm004870 Prunus mume Pm004870 I 0.000
29908.m006165 Ricinus communis 29908.m006165 I 0.000
cassava28944.valid.m1 Manihot esculenta cassava28944.valid.m1 I 0.000
cassava44357.m1 Manihot esculenta cassava44357.m1 I 0.000
Cucsa.365220 Cucumis sativus Cucsa.365220 I 0.000
Cucsa.372760 Cucumis sativus Cucsa.372760 I 0.000
mgf021045m Mimulus guttatus mgf021045m I 0.000
mgf023290m Mimulus guttatus mgf023290m I 0.000
Aquca_014_00181 Aquilegia coerulea Aquca_014_00181 I 0.000
Bostr.12302s0095 Boechera stricta Bostr.12302s0095 I 0.000
Bostr.12659s0041 Boechera stricta Bostr.12659s0041 I 0.000
Cagra.1192s0001 Capsella grandiflora Cagra.1192s0001 I 0.000
Cagra.2306s0038 Capsella grandiflora Cagra.2306s0038 I 0.000
Carubv10010179m.g Capsella rubella Carubv10010179m.g I 0.000
Carubv10010259m.g Capsella rubella Carubv10010259m.g I 0.000
Ciclev10002294m.g Citrus clementina Ciclev10002294m.g I 0.000
Eucgr.F03772 Eucalyptus grandis Eucgr.F03772 I 0.000
evm.TU.supercontig_36.41 Carica papaya evm.TU.supercontig_36.41 I 0.000
gene11145-v1.0-hybrid Fragaria vesca gene11145-v1.0-hybrid I 0.000
Gorai.002G220900 Gossypium raimondii Gorai.002G220900 I 0.000
Gorai.009G244500 Gossypium raimondii Gorai.009G244500 I 0.000
Gorai.010G048900 Gossypium raimondii Gorai.010G048900 I 0.000
Lus10003740.g Linum usitatissimum Lus10003740.g I 0.000
Lus10028032.g Linum usitatissimum Lus10028032.g I 0.000
MDP0000120147 Malus domestica MDP0000120147 I 0.000
MDP0000923690 Malus domestica MDP0000923690 I 0.000
orange1.1g039680m.g Citrus sinensis orange1.1g039680m.g I 0.000
Pavir.Ia03856 Panicum virgatum Pavir.Ia03856 I 0.000
Pavir.Ib01111 Panicum virgatum Pavir.Ib01111 I 0.000
Pavir.J02555 Panicum virgatum Pavir.J02555 I 0.000
Pavir.J23882 Panicum virgatum Pavir.J23882 I 0.000
Pavir.J26231 Panicum virgatum Pavir.J26231 I 0.000
SapurV1A.0010s0960 Salix purpurea SapurV1A.0010s0960 I 0.000
SapurV1A.0105s0160 Salix purpurea SapurV1A.0105s0160 I 0.000
SapurV1A.3198s0010 Salix purpurea SapurV1A.3198s0010 I 0.000
Thhalv10008639m.g Eutrema salsugineum Thhalv10008639m.g I 0.000
Thhalv10011778m.g Eutrema salsugineum Thhalv10011778m.g I 0.000
Thhalv10019045m.g Eutrema salsugineum Thhalv10019045m.g I 0.000