ENSPSIG00000018001 (Pelodiscus sinensis)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSPSIG00000018001 T164759_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LIN28B
M04663_2.00 		Homo sapiens
CGCGRWRDRRCDGCG
CGCHGYYHYWYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_HT-SELEX 		0.944 0.944
LIN28B
M04664_2.00 		Homo sapiens
CGCGRTRNNRCDGCG
CGCHGYNNYAYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_Methyl-HT-SELEX 		0.944 0.944
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000020326 CSD 1 36

Links

Other CSD family TFs
Other Pelodiscus sinensis TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_Genewise1.C_120062 Heterobasidion annosum estExt_Genewise1.C_120062 N
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N
S40285_05706 Stachybotrys chlorohalonata S40285_05706 N
SCHCODRAFT_110960 Schizophyllum commune SCHCODRAFT_110960 N
SINV25043 Solenopsis invicta SINV25043 N
sr12520 Sporisorium reilianum sr12520 N
Thaps25909 Thalassiosira pseudonana Thaps25909 N
TSTA_110260 Talaromyces stipitatus TSTA_110260 N
UCREL1_5722 Eutypa lata UCREL1_5722 N
UM01457 Ustilago maydis UM01457 N
X797_001779 Metarhizium robertsii X797_001779 N
Cla010647 Citrullus lanatus Cla010647 N
fgenesh1_pg.C_scaffold_11000089 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000089 N
estExt_fgeneshTM_pg.C_10542 Tremella mesenterica estExt_fgeneshTM_pg.C_10542 N
PAS_chr3_1149 Komagataella pastoris PAS_chr3_1149 N
Kwal_9519 Kluyveromyces waltii Kwal_9519 N
SAKL0C03872g Lachancea kluyveri SAKL0C03872g N
SAKL0C03916g Lachancea kluyveri SAKL0C03916g N
SAKL0C10648g Lachancea kluyveri SAKL0C10648g N
SAKL0D09922g Lachancea kluyveri SAKL0D09922g N
SAKL0H00726g Lachancea kluyveri SAKL0H00726g N
XP_002490100.1 Pichia pastoris XP_002490100.1 N
XP_002492281.1 Pichia pastoris XP_002492281.1 N
ASIS002444 Anopheles sinensis ASIS002444 N
ASIM_0001132301 Anisakis simplex ASIM_0001132301 N
EVEC_0001251901 Enterobius vermicularis EVEC_0001251901 N
GPLIN_000170600 Globodera pallida GPLIN_000170600 N
MCOS_0000664501 Mesocestoides corti MCOS_0000664501 N
KLLA0_B11495g Kluyveromyces lactis KLLA0_B11495g N
AWRI1499_2837 Brettanomyces bruxellensis AWRI1499_2837 N
BGIBMGA006156 Bombyx mori BGIBMGA006156 N
BN7_5943 Wickerhamomyces ciferrii BN7_5943 N
CC1G_07855 Coprinopsis cinerea CC1G_07855 N
CMQ_7998 Grosmannia clavigera CMQ_7998 N
TCF7L2 Tursiops truncatus ENSTTRG00000002360 N
GLOINDRAFT_9339 Rhizophagus irregularis GLOINDRAFT_9339 N
HelroG178674 Helobdella robusta HelroG178674 N
HETIRDRAFT_460226 Heterobasidion irregulare HETIRDRAFT_460226 N
HPODL_02662 Ogataea parapolymorpha HPODL_02662 N
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N
K437DRAFT_266676 Tilletiaria anomala K437DRAFT_266676 N
K437DRAFT_66818 Tilletiaria anomala K437DRAFT_66818 N
A1Q1_02593 Trichosporon asahii A1Q1_02593 N
KUCA_T00004799001 Kuraishia capsulata KUCA_T00004799001 N
LALA0_S01e08702g Lachancea lanzarotensis LALA0_S01e08702g N
LALA0_S10e00254g Lachancea lanzarotensis LALA0_S10e00254g N
M378DRAFT_41557 Amanita muscaria M378DRAFT_41557 N
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N
MAC_03708 Metarhizium acridum MAC_03708 N
MAJ_01270 Metarhizium majus MAJ_01270 N
MAM_02299 Metarhizium album MAM_02299 N
MBR_01289 Metarhizium brunneum MBR_01289 N
Moror_8439 Moniliophthora roreri Moror_8439 N
MPER_12197 Moniliophthora perniciosa MPER_12197 N
MVLG_01553 Microbotryum violaceum MVLG_01553 N
PAS_chr1-1_0442 Komagataella pastoris PAS_chr1-1_0442 N