CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPI1
(
Meleagris gallopavo
)
Ets
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00178 (Ets)
IPR000418
ENSMGAG00000010682
T176380_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Spi1
M00155_2.00
Mus musculus
NNNVGGAAVH
DBTTCCBNNN
PBM
Badis et al.(2009)
Sfpi1_1034
0.996
0.988
Spi1
M01475_2.00
Mus musculus
DDNVGGAASY
RSTTCCBNHH
PBM
Wei et al.(2010)
Sfpi1
0.996
0.988
SPI1
M02965_2.00
Homo sapiens
RAAAAGMGGAAGTW
WACTTCCKCTTTTY
SELEX
Jolma et al.(2013)
SPI1_1
0.996
0.988
SPI1
M07944_2.00
Homo sapiens
NRAAWGRGGAASTGRRANN
NNTYYCASTTCCYCWTTYN
ChIP-seq
Gerstein et al.(2012)
GM12878_PU1_HudsonAlpha
0.996
0.988
SPI1
M07945_2.00
Homo sapiens
AAWGRGGAASTGARAVHNN
NNDBTYTCASTTCCYCWTT
ChIP-seq
Gerstein et al.(2012)
GM12891_PU1_HudsonAlpha
0.996
0.988
SPI1
M07946_2.00
Homo sapiens
RRAAAGAGGAAGTGV
BCACTTCCTCTTTYY
ChIP-seq
Gerstein et al.(2012)
K562_PU1_HudsonAlpha
0.996
0.988
SPI1
M08026_2.00
Homo sapiens
VRAAWGRGGAAGTGV
BCACTTCCYCWTTYB
ChIP-seq
Chen et al.(2011)
SRP005406_SPI1
0.996
0.988
Spi1
M08027_2.00
Mus musculus
VRRAWRRGGAAGWVD
HBWCTTCCYYWTYYB
ChIP-seq
Chen et al.(2011)
GSE11329_Sfpi1
0.996
0.988
SPI1
M09047_2.00
Homo sapiens
VRAAWGRGGAAGTGRNN
NNYCACTTCCYCWTTYB
Misc
Kulakovskiy et al.(2013)
SPI1_HUMAN.H11MO.0.A
0.996
0.988
Spi1
M09065_2.00
Mus musculus
VRARWGRGGAAGTGV
BCACTTCCYCWYTYB
Misc
Kulakovskiy et al.(2013)
SPI1_MOUSE.H11MO.0.A
0.996
0.988
Spi1
M09538_2.00
Mus musculus
WGAGGAAGTG
CACTTCCTCW
Misc
Heinz et al.(2010)
ThioMac-PU.1_GSE21512
0.996
0.988
SPI1
M10472_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PU1_Q4
0.996
0.988
SPI1
M10473_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PU1_Q6
0.996
0.988
SPI1
M10474_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SPI1_01
0.996
0.988
SPI1
M10475_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SPI1_07
0.996
0.988
SPI1
M10476_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SPI1_08
0.996
0.988
SPI1
M10477_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SPI1_Q5
0.996
0.988
SPIC
M03005_2.00
Homo sapiens
NRAAWSVGGAAGTM
KACTTCCBSWTTYN
SELEX
Jolma et al.(2013)
SPIC_1
0.975
0.625
Spic
M01480_2.00
Mus musculus
NNNNRGAAV
BTTCYNNNN
PBM
Wei et al.(2010)
Spic
0.966
0.613
Spic
M03009_2.00
Mus musculus
RAAAAGMGGAAGTW
WACTTCCKCTTTTY
SELEX
Jolma et al.(2013)
Spic_1
0.966
0.613
SPIB
M03008_2.00
Homo sapiens
NAAAAGMGGAAGTD
HACTTCCKCTTTTN
SELEX
Jolma et al.(2013)
SPIB_1
0.960
0.738
SPIB
M04803_2.00
Homo sapiens
DWDGVGGAAGTD
HACTTCCBCHWH
SELEX
Yin et al.(2017)
SPIB_eDBD_HT-SELEX
0.960
0.738
SPIB
M04805_2.00
Homo sapiens
NWWWRVGGAASTN
NASTTCCBYWWWN
SELEX
Yin et al.(2017)
SPIB_FL_HT-SELEX
0.960
0.738
SPIB
M02678_2.00
Homo sapiens
WSMGGAA
TTCCKSW
SELEX
Mathelier et al.(2014)
MA0081.1
0.960
0.738
SPIB
M09064_2.00
Homo sapiens
NRAAWGRGGAAGTGRRD
HYYCACTTCCYCWTTYN
Misc
Kulakovskiy et al.(2013)
SPIB_HUMAN.H11MO.0.A
0.960
0.738
Spib
M09068_2.00
Mus musculus
RAAAGRGGAAGTGRVWN
NWBYCACTTCCYCTTTY
Misc
Kulakovskiy et al.(2013)
SPIB_MOUSE.H11MO.0.A
0.960
0.738
SPIB
M09537_2.00
Homo sapiens
AAARVGGAASTG
CASTTCCBYTTT
Misc
Heinz et al.(2010)
OCILY3-SPIB_GSE56857
0.960
0.738
SPIB
M10519_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SPIB_01
0.960
0.738
SPIB
M04804_2.00
Homo sapiens
DAWGRGGAAGTD
HACTTCCYCWTH
SELEX
Yin et al.(2017)
SPIB_eDBD_Methyl-HT-SELEX
0.960
0.738
SPIB
M04806_2.00
Homo sapiens
RWWWGRGGAAGTD
HACTTCCYCWWWY
SELEX
Yin et al.(2017)
SPIB_FL_Methyl-HT-SELEX
0.960
0.738
Elf5
M01490_2.00
Mus musculus
DNVVGGAARH
DYTTCCBBNH
PBM
Wei et al.(2010)
Elf5
0.760
0.438
ELF5
M02988_2.00
Homo sapiens
WNVMGGAAGTN
NACTTCCKBNW
SELEX
Jolma et al.(2013)
ELF5_1
0.760
0.438
ELF5
M02989_2.00
Homo sapiens
WNVMGGAARYN
NRYTTCCKBNW
SELEX
Jolma et al.(2013)
ELF5_2
0.760
0.438
Elf5
M03011_2.00
Mus musculus
WNVMGGAARYN
NRYTTCCKBNW
SELEX
Jolma et al.(2013)
Elf5_1
0.760
0.438
ELF5
M04756_2.00
Homo sapiens
NDNVMGGAAGBD
HVCTTCCKBNHN
SELEX
Yin et al.(2017)
ELF5_eDBD_HT-SELEX
0.760
0.438
ELF5
M04758_2.00
Homo sapiens
NAMCCGGAAGYN
NRCTTCCGGKTN
SELEX
Yin et al.(2017)
ELF5_FL_HT-SELEX
0.760
0.438
ELF5
M09054_2.00
Homo sapiens
VVVANVMGGAAGHDV
BHDCTTCCKBNTBBB
Misc
Kulakovskiy et al.(2013)
ELF5_HUMAN.H11MO.0.A
0.760
0.438
Elf5
M09076_2.00
Mus musculus
RGRAVRAGGAAGDRRNN
NNYYHCTTCCTYBTYCY
Misc
Kulakovskiy et al.(2013)
ELF5_MOUSE.H11MO.0.A
0.760
0.438
ELF5
M09534_2.00
Homo sapiens
ABVMGGAAGT
ACTTCCKBVT
Misc
Heinz et al.(2010)
T47D-ELF5_GSE30407
0.760
0.438
ELF5
M10501_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELF5_01
0.760
0.438
ELF5
M04757_2.00
Homo sapiens
NABVAGGAAGTD
HACTTCCTBVTN
SELEX
Yin et al.(2017)
ELF5_eDBD_Methyl-HT-SELEX
0.760
0.438
ELF5
M04759_2.00
Homo sapiens
DABVAGGAAGTD
HACTTCCTBVTH
SELEX
Yin et al.(2017)
ELF5_FL_Methyl-HT-SELEX
0.760
0.438
For this family, TFs with SR scores >
0.717
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000011109
Ets
158
240
RLYQFLLDLLRSGDMKDSIWWVDKEKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKVKKKLTYQFS
ENSMGAP00000019559
Ets
217
299
RLYQFLLDLLRSGDMKDSIWWVDKEKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKVKKKLTYQFS
Links
Other
Ets
family TFs
Other
Meleagris gallopavo
TFs
263 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT3G12910
Arabidopsis thaliana
AT3G12910
D
NAC002
Arabidopsis thaliana
AT1G01720
D
SapurV1A.0076s0070
Salix purpurea
SapurV1A.0076s0070
I
Si036303m.g
Setaria italica
Si036303m.g
I
TCM_029321
Theobroma cacao
TCM_029321
I
Traes_7DL_D05DA373C
Triticum aestivum
Traes_7DL_D05DA373C
I
TRIUR3_18561
Triticum urartu
TRIUR3_18561
I
TRIUR3_29260
Triticum urartu
TRIUR3_29260
I
SapurV1A.0059s0580
Salix purpurea
SapurV1A.0059s0580
I
Pavir.J31204
Panicum virgatum
Pavir.J31204
I
Pavir.Ib01528
Panicum virgatum
Pavir.Ib01528
I
Cla023594
Citrullus lanatus
Cla023594
I
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
Pavir.Cb00167
Panicum virgatum
Pavir.Cb00167
I
cassava39074.m1
Manihot esculenta
cassava39074.m1
I
Gorai.010G236700
Gossypium raimondii
Gorai.010G236700
I
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
Gorai.010G171100
Gossypium raimondii
Gorai.010G171100
I
Bostr.3640s0064
Boechera stricta
Bostr.3640s0064
I
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
Cagra.5641s0055
Capsella grandiflora
Cagra.5641s0055
I
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
Carubv10014270m.g
Capsella rubella
Carubv10014270m.g
I
Eucgr.F01463
Eucalyptus grandis
Eucgr.F01463
I
SapurV1A.0958s0170
Salix purpurea
SapurV1A.0958s0170
I
Bo3g065200
Brassica oleracea
Bo3g065200
I
Bo5g001100
Brassica oleracea
Bo5g001100
I
Bra033239
Brassica rapa
Bra033239
I
Bra034719
Brassica rapa
Bra034719
I
PK05686.1
Cannabis sativa
PK05686.1
I
Bra039353
Brassica rapa
Bra039353
I
Thhalv10021225m.g
Eutrema salsugineum
Thhalv10021225m.g
I
F775_11764
Aegilops tauschii
F775_11764
I
fgenesh2_kg.3__1353__AT3G12910.1
Arabidopsis lyrata
fgenesh2_kg.3__1353__AT3G12910.1
I
Bo1g138800
Brassica oleracea
Bo1g138800
I
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
GRMZM2G052239
Zea mays
GRMZM2G052239
I
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
MLOC_37364
Hordeum vulgare
MLOC_37364
I
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
PGSC0003DMG400039898
Solanum tuberosum
PGSC0003DMG400039898
I
POPTR_0003s14950
Populus trichocarpa
POPTR_0003s14950
I
POPTR_0005s10610
Populus trichocarpa
POPTR_0005s10610
I
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
gene17203-v1.0-hybrid
Fragaria vesca
gene17203-v1.0-hybrid
N
Gorai.008G038800
Gossypium raimondii
Gorai.008G038800
N
MDP0000480581
Malus domestica
MDP0000480581
N
MDP0000868556
Malus domestica
MDP0000868556
N
chr3.CM0460.350.nd
Lotus japonicus
chr3.CM0460.350.nd
N
Ca_11128
Cicer arietinum
Ca_11128
N
Bo9g024360
Brassica oleracea
Bo9g024360
N
Bra037283
Brassica rapa
Bra037283
N
BRADI3G13630
Brachypodium distachyon
BRADI3G13630
N
GLYMA11G10230
Glycine max
GLYMA11G10230
N
GLYMA12G02540
Glycine max
GLYMA12G02540
N
MTR_4g075980
Medicago truncatula
MTR_4g075980
N
PRUPE_ppa009455mg
Prunus persica
PRUPE_ppa009455mg
N
TCM_006499
Theobroma cacao
TCM_006499
N
VIT_04s0008g00150
Vitis vinifera
VIT_04s0008g00150
N
evm.TU.supercontig_320.2
Carica papaya
evm.TU.supercontig_320.2
N
Cla007018
Citrullus lanatus
Cla007018
N
Pm020961
Prunus mume
Pm020961
N
29797.m000353
Ricinus communis
29797.m000353
N
29830.m001415
Ricinus communis
29830.m001415
N
Cucsa.119310
Cucumis sativus
Cucsa.119310
N
mgf013168m
Mimulus guttatus
mgf013168m
N
Aquca_015_00469
Aquilegia coerulea
Aquca_015_00469
N
Eucgr.I01494
Eucalyptus grandis
Eucgr.I01494
N