CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

FOXI1 *(Bos taurus)* Forkhead
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00250 (Forkhead)	IPR001766	ENSBTAG00000014620	T185254_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
FOXI1 M03026_2.00	Homo sapiens	GTAAACA	TGTTTAC	SELEX Jolma et al.(2013) FOXI1_1	0.866	1.000
FOXI1 M03027_2.00	Homo sapiens	RTGTKTACGGTAAACAA	TTGTTTACCGTAMACAY	SELEX Jolma et al.(2013) FOXI1_2	0.866	1.000
FOXI1 M04827_2.00	Homo sapiens	NNNNNRTMAACAN	NTGTTKAYNNNNN	SELEX Yin et al.(2017) FOXI1_eDBD_HT-SELEX	0.866	1.000
FOXI1 M04829_2.00	Homo sapiens	AAYGTAAACAMW	WKTGTTTACRTT	SELEX Yin et al.(2017) FOXI1_FL_HT-SELEX	0.866	1.000
FOXI1 M09095_2.00	Homo sapiens	RRCCAATCAVAD	HTBTGATTGGYY	Misc Kulakovskiy et al.(2013) FOXI1_HUMAN.H11MO.0.B	0.866	1.000
FOXI1 M10556_2.00	Homo sapiens	HAWAYAAAYAHVH	DBDTRTTTRTWTD	Transfac Matys et al.(2006) V$HFH3_01	0.866	1.000
FOXI1 M04828_2.00	Homo sapiens	NWWVHRTAAACAH	DTGTTTAYDBWWN	SELEX Yin et al.(2017) FOXI1_eDBD_Methyl-HT-SELEX	0.866	1.000
FOXI1 M04830_2.00	Homo sapiens	AAYRTAAACAAW	WTTGTTTAYRTT	SELEX Yin et al.(2017) FOXI1_FL_Methyl-HT-SELEX	0.866	1.000
Foxi1 M09109_2.00	Mus musculus	RRCCAATCAVAD	HTBTGATTGGYY	Misc Kulakovskiy et al.(2013) FOXI1_MOUSE.H11MO.0.B	0.866	0.988
CBG14280 M01974_2.00	Caenorhabditis briggsae	RTAAACAN	NTGTTTAY	PBM Weirauch et al.(2014) pTH6734	0.768	0.651
slp1 M01986_2.00	Drosophila melanogaster	NRTAAACANN	NNTGTTTAYN	PBM Weirauch et al.(2014) pTH6549	0.766	0.640
slp1 M03736_2.00	Drosophila melanogaster	WDYRTAAACAWW	WWTGTTTAYRHW	SELEX Nitta et al.(2015) slp1_1	0.766	0.640
slp1 M03737_2.00	Drosophila melanogaster	RTRTAAACAAAYADH	DHTRTTTGTTTAYAY	SELEX Nitta et al.(2015) slp1_2	0.766	0.640
slp1 M06474_2.00	Drosophila melanogaster	WRBVWAAACAH	DTGTTTWBVYW	B1H Mathelier et al.(2014) MA0458.1	0.766	0.640
slp1 M06195_2.00	Drosophila melanogaster	WRBVWAAACAH	DTGTTTWBVYW	B1H Zhu et al.(2011) slp1_NAR_FBgn0003430	0.766	0.640
slp1 M09669_2.00	Drosophila melanogaster	ATGTMAACAMAVV	BBTKTGTTKACAT	Misc Kulakovskiy et al.(2009) slp1	0.766	0.640
FOXG1 M01978_2.00	Homo sapiens	RTAAACAH	DTGTTTAY	PBM Weirauch et al.(2014) pTH5501	0.759	0.640
Foxg1 M00791_2.00	Mus musculus	NNNNMHAYAN	NTRTDKNNNN	PBM Weirauch et al.(2013) pTH2846	0.759	0.640
FOXG1 M03032_2.00	Homo sapiens	RTAAACAATDGTAAACA	TGTTTACHATTGTTTAY	SELEX Jolma et al.(2013) FOXG1_1	0.759	0.640
FOXG1 M03033_2.00	Homo sapiens	RCGGACACAATR	YATTGTGTCCGY	SELEX Jolma et al.(2013) FOXG1_2	0.759	0.640
Foxg1 M03052_2.00	Mus musculus	ATAAACAAVTGTMAACA	TGTTKACABTTGTTTAT	SELEX Jolma et al.(2013) Foxg1_1	0.759	0.640
Foxg1 M03053_2.00	Mus musculus	MHGGACACAATC	GATTGTGTCCDK	SELEX Jolma et al.(2013) Foxg1_2	0.759	0.640
Foxg1 M03054_2.00	Mus musculus	GTAAACA	TGTTTAC	SELEX Jolma et al.(2013) Foxg1_3	0.759	0.640
FOXG1 M04839_2.00	Homo sapiens	NACRYMMACAH	DTGTKKRYGTN	SELEX Yin et al.(2017) FOXG1_eDBD_HT-SELEX	0.759	0.640
FOXG1 M04840_2.00	Homo sapiens	HRCGYMAACAH	DTGTTKRCGYD	SELEX Yin et al.(2017) FOXG1_eDBD_Methyl-HT-SELEX	0.759	0.640
foxg1a M01985_2.00	Oryzias latipes	RTAAACAH	DTGTTTAY	PBM Weirauch et al.(2014) pTH6729	0.752	0.628
slp2 M03738_2.00	Drosophila melanogaster	NNTRTTTACAACAHN	NDTGTTGTAAAYANN	SELEX Nitta et al.(2015) slp2_1	0.738	0.651
slp2 M06196_2.00	Drosophila melanogaster	RTAAACAV	BTGTTTAY	B1H Zhu et al.(2011) slp2_SANGER_5_FBgn0004567	0.738	0.651
FOXK2 M08118_2.00	Homo sapiens	NNRTAAACANN	NNTGTTTAYNN	ChIP-seq Mathelier et al.(2014) MA1103.1	0.728	0.547
FOXC1 M00257_2.00	Homo sapiens	NNNVHHAAYA	TRTTDDBNNN	PBM Barrera et al.(2016) FOXC1_REF	0.718	0.674
Foxc1 M01982_2.00	Mus musculus	HNNRHMAAYA	TRTTKDYNND	PBM Weirauch et al.(2014) pTH2673	0.718	0.674
FOXC1 M03013_2.00	Homo sapiens	AWRTAAAYAAAYA	TRTTTRTTTAYWT	SELEX Jolma et al.(2013) FOXC1_1	0.718	0.674
FOXC1 M03014_2.00	Homo sapiens	NRWMAATATTKWYN	NRWMAATATTKWYN	SELEX Jolma et al.(2013) FOXC1_2	0.718	0.674
FOXC1 M03015_2.00	Homo sapiens	WRWRTMAAYAW	WTRTTKAYWYW	SELEX Jolma et al.(2013) FOXC1_3	0.718	0.674
Foxc1 M03059_2.00	Mus musculus	RTAAAYAAACA	TGTTTRTTTAY	SELEX Jolma et al.(2013) Foxc1_1	0.718	0.674
Foxc1 M03060_2.00	Mus musculus	RTAAACA	TGTTTAY	SELEX Jolma et al.(2013) Foxc1_2	0.718	0.674
FOXC1 M09083_2.00	Homo sapiens	SBWAWRTAAACADHN	NDHTGTTTAYWTWVS	Misc Kulakovskiy et al.(2013) FOXC1_HUMAN.H11MO.0.C	0.718	0.674
Foxc1 M09111_2.00	Mus musculus	SBWAWRTAAACADHN	NDHTGTTTAYWTWVS	Misc Kulakovskiy et al.(2013) FOXC1_MOUSE.H11MO.0.C	0.718	0.674
FOXC1 M10525_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXC1_Q4	0.718	0.674
FOXC1 M10526_2.00	Homo sapiens	TSTTTATTTACDBNVN	NBNVHGTAAATAAASA	Transfac Matys et al.(2006) V$FREAC3_01	0.718	0.674
FOXC1 M00253_2.00	Homo sapiens	NNHATAAWHAN	NTDWTTATDNN	PBM Barrera et al.(2016) FOXC1_F112S	0.718	0.663
FOXC1 M00255_2.00	Homo sapiens	NRTATATWHNNN	NNNDWATATAYN	PBM Barrera et al.(2016) FOXC1_L130F	0.718	0.663
FOXC1 M00256_2.00	Homo sapiens	NNNNWWTYAMAWN	NWTKTRAWWNNNN	PBM Barrera et al.(2016) FOXC1_P79L	0.718	0.663
FOXC1 M00258_2.00	Homo sapiens	NNNAMAAYANN	NNTRTTKTNNN	PBM Barrera et al.(2016) FOXC1_S131L	0.718	0.663
FOXC1 M00259_2.00	Homo sapiens	RTAAACAW	WTGTTTAY	PBM Barrera et al.(2016) FOXC1_S82T	0.718	0.663
foxi4.2.S M10576_2.00	Xenopus laevis	WNWATAAACAWNNR	YNNWTGTTTATWNW	Transfac Matys et al.(2006) V$XFD2_01	0.710	0.884
SPU_025010 M01988_2.00	Strongylocentrotus purpuratus	NNVNHHAYAN	NTRTDDNBNN	PBM Weirauch et al.(2014) pTH6641	0.709	0.558
FOXE1 M04845_2.00	Homo sapiens	BVYTAWRYAAACADN	NHTGTTTRYWTARBV	SELEX Yin et al.(2017) FOXE1_eDBD_HT-SELEX	0.709	0.640
FOXE1 M04846_2.00	Homo sapiens	BVYTAARYAAACAWH	DWTGTTTRYTTARBV	SELEX Yin et al.(2017) FOXE1_eDBD_Methyl-HT-SELEX	0.709	0.640
FOXL1 M03034_2.00	Homo sapiens	RTAAACA	TGTTTAY	SELEX Jolma et al.(2013) FOXL1_1	0.706	0.674
FOXL1 M03035_2.00	Homo sapiens	NRTAAAYAAAYAN	NTRTTTRTTTAYN	SELEX Jolma et al.(2013) FOXL1_2	0.706	0.674
FOXL1 M10558_2.00	Homo sapiens	DHNVHATAAAYAHNNN	NNNDTRTTTATDBNDH	Transfac Matys et al.(2006) V$FREAC7_01	0.706	0.674
Foxl1 M00164_2.00	Mus musculus	NNNRTMAAYA	TRTTKAYNNN	PBM Badis et al.(2009) Foxl1_2809	0.706	0.663
fd64A M06197_2.00	Drosophila melanogaster	KVWAAACA	TGTTTWBM	B1H Zhu et al.(2011) fd64A_SANGER_5_FBgn0004895	0.705	0.628
Foxk1 M00163_2.00	Mus musculus	RWMAACAA	TTGTTKWY	PBM Badis et al.(2009) Foxk1_2323	0.700	0.523
Foxk1 M03061_2.00	Mus musculus	CGGACACAATC	GATTGTGTCCG	SELEX Jolma et al.(2013) Foxk1_1	0.700	0.523
Foxk1 M03062_2.00	Mus musculus	RTAAACA	TGTTTAY	SELEX Jolma et al.(2013) Foxk1_2	0.700	0.523
Foxk1 M09113_2.00	Mus musculus	NNGDMAACAVV	BBTGTTKHCNN	Misc Kulakovskiy et al.(2013) FOXK1_MOUSE.H11MO.0.A	0.700	0.523
FOXK1 M01977_2.00	Homo sapiens	NNRWMMAYAN	NTRTKKWYNN	PBM Weirauch et al.(2014) pTH6108	0.700	0.512
FOXK1 M03025_2.00	Homo sapiens	CGGACACAAT	ATTGTGTCCG	SELEX Jolma et al.(2013) FOXK1_1	0.700	0.512
FOXK1 M04825_2.00	Homo sapiens	NDNRTMAAYAN	NTRTTKAYNHN	SELEX Yin et al.(2017) FOXK1_eDBD_HT-SELEX	0.700	0.512
FOXK1 M08120_2.00	Homo sapiens	NNNGTAAACANVNN	NNBNTGTTTACNNN	ChIP-seq Mathelier et al.(2014) MA0852.2	0.700	0.512
FOXK1 M09094_2.00	Homo sapiens	VNDRDAAACA	TGTTTHYHNB	Misc Kulakovskiy et al.(2013) FOXK1_HUMAN.H11MO.0.A	0.700	0.512
FOXK1 M04826_2.00	Homo sapiens	NWYRYAAWYAD	HTRWTTRYRWN	SELEX Yin et al.(2017) FOXK1_eDBD_Methyl-HT-SELEX	0.700	0.512
FOXJ3 M03046_2.00	Homo sapiens	RTAAAVAA	TTBTTTAY	SELEX Jolma et al.(2013) FOXJ3_1	0.696	0.581
FOXJ3 M03047_2.00	Homo sapiens	GTAAACARTMAACA	TGTTKAYTGTTTAC	SELEX Jolma et al.(2013) FOXJ3_2	0.696	0.581
FOXJ3 M03048_2.00	Homo sapiens	GTAAACATAAACA	TGTTTATGTTTAC	SELEX Jolma et al.(2013) FOXJ3_3	0.696	0.581
FOXJ3 M02736_2.00	Homo sapiens	AAACAATAAACA	TGTTTATTGTTT	SELEX Jolma et al.(2010) FOXJ3_dimer	0.696	0.581
FOXJ3 M02737_2.00	Homo sapiens	RTAAACAW	WTGTTTAY	SELEX Jolma et al.(2010) FOXJ3_monomer	0.696	0.581
FOXJ3 M04859_2.00	Homo sapiens	DYGTMAACAH	DTGTTKACRH	SELEX Yin et al.(2017) FOXJ3_eDBD_HT-SELEX	0.696	0.581
FOXJ3 M09098_2.00	Homo sapiens	WAAMMATAAACAN	NTGTTTATKKTTW	Misc Kulakovskiy et al.(2013) FOXJ3_HUMAN.H11MO.0.A	0.696	0.581
FOXJ3 M04860_2.00	Homo sapiens	RYGTMAACAH	DTGTTKACRY	SELEX Yin et al.(2017) FOXJ3_eDBD_Methyl-HT-SELEX	0.696	0.581
Foxj3 M00160_2.00	Mus musculus	NRTAAACAHN	NDTGTTTAYN	PBM Badis et al.(2009) Foxj3_0982	0.696	0.581
Foxj3 M01981_2.00	Mus musculus	VNHHAYANN	NNTRTDDNB	PBM Weirauch et al.(2014) pTH6591	0.696	0.581
Foxj3 M03055_2.00	Mus musculus	ACGGACACAAT	ATTGTGTCCGT	SELEX Jolma et al.(2013) Foxj3_1	0.696	0.581
Foxj3 M03056_2.00	Mus musculus	GTAAACARTMAACA	TGTTKAYTGTTTAC	SELEX Jolma et al.(2013) Foxj3_2	0.696	0.581
Foxj3 M03057_2.00	Mus musculus	RTAAACAW	WTGTTTAY	SELEX Jolma et al.(2013) Foxj3_3	0.696	0.581
Foxj3 M03058_2.00	Mus musculus	RTAAACAWAAACA	TGTTTWTGTTTAY	SELEX Jolma et al.(2013) Foxj3_4	0.696	0.581
Foxj3 M09102_2.00	Mus musculus	WAAMMATAAACAN	NTGTTTATKKTTW	Misc Kulakovskiy et al.(2013) FOXJ3_MOUSE.H11MO.0.A	0.696	0.581
FOXC1 M00254_2.00	Homo sapiens	RRTAAACANN	NNTGTTTAYY	PBM Barrera et al.(2016) FOXC1_I126M	0.694	0.663
foxe3 M01228_2.00	Xenopus tropicalis	WNNVHHMAYW	WRTKDDBNNW	PBM Lambert et al.(2019) pTH9824	0.693	0.628
Foxj2 M01980_2.00	Mus musculus	RTAAACAN	NTGTTTAY	PBM Weirauch et al.(2014) pTH6638	0.688	0.558
Foxc2 M00796_2.00	Mus musculus	HNNRHMAAYA	TRTTKDYNND	PBM Weirauch et al.(2013) pTH3796	0.686	0.663
FOXC2 M03036_2.00	Homo sapiens	NRTMAATATTDWYN	NRWHAATATTKAYN	SELEX Jolma et al.(2013) FOXC2_1	0.686	0.663
FOXC2 M03037_2.00	Homo sapiens	RTAAAYAAACA	TGTTTRTTTAY	SELEX Jolma et al.(2013) FOXC2_2	0.686	0.663
FOXC2 M03038_2.00	Homo sapiens	WAHRTMAAYAWW	WWTRTTKAYDTW	SELEX Jolma et al.(2013) FOXC2_3	0.686	0.663
FOXC2 M04841_2.00	Homo sapiens	NHVNRYMAACAH	DTGTTKRYNBDN	SELEX Yin et al.(2017) FOXC2_eDBD_HT-SELEX_1	0.686	0.663
FOXC2 M04842_2.00	Homo sapiens	RHAMAYAAACAH	DTGTTTRTKTDY	SELEX Yin et al.(2017) FOXC2_eDBD_HT-SELEX_2	0.686	0.663
FOXC2 M10559_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FKHL14_Q2	0.686	0.663
FOXC2 M04843_2.00	Homo sapiens	NHNNRYMAACAN	NTGTTKRYNNDN	SELEX Yin et al.(2017) FOXC2_eDBD_Methyl-HT-SELEX_1	0.686	0.663
FOXC2 M04844_2.00	Homo sapiens	VHMMAYAAACAN	NTGTTTRTKKDB	SELEX Yin et al.(2017) FOXC2_eDBD_Methyl-HT-SELEX_2	0.686	0.663
SPU_007644 M01987_2.00	Strongylocentrotus purpuratus	NNHHAYDNN	NNHRTDDNN	PBM Weirauch et al.(2014) pTH6497	0.684	0.570
Foxj2 M00790_2.00	Mus musculus	VHMAAYANN	NNTRTTKDB	PBM Weirauch et al.(2013) pTH3043	0.683	0.558
FOXJ2 M03016_2.00	Homo sapiens	GTAAACARTMAACA	TGTTKAYTGTTTAC	SELEX Jolma et al.(2013) FOXJ2_1	0.683	0.558
FOXJ2 M03017_2.00	Homo sapiens	RTAAACAH	DTGTTTAY	SELEX Jolma et al.(2013) FOXJ2_2	0.683	0.558
FOXJ2 M03018_2.00	Homo sapiens	GTAAACAWMAACA	TGTTKWTGTTTAC	SELEX Jolma et al.(2013) FOXJ2_3	0.683	0.558
FOXJ2 M04809_2.00	Homo sapiens	NTRTTTACAAYANN	NNTRTTGTAAAYAN	SELEX Yin et al.(2017) FOXJ2_eDBD_HT-SELEX	0.683	0.558
FOXJ2 M09084_2.00	Homo sapiens	WARAYAAAYA	TRTTTRTYTW	Misc Kulakovskiy et al.(2013) FOXJ2_HUMAN.H11MO.0.C	0.683	0.558
Foxj2 M09100_2.00	Mus musculus	WARAYAAAYA	TRTTTRTYTW	Misc Kulakovskiy et al.(2013) FOXJ2_MOUSE.H11MO.0.C	0.683	0.558
FOXJ2 M10527_2.00	Homo sapiens	HHNHMRAYAAAYANHNND	HNNDNTRTTTRTYKDNDD	Transfac Matys et al.(2006) V$FOXJ2_01	0.683	0.558
FOXJ2 M10528_2.00	Homo sapiens	VYMAYAATATTTKN	NMAAATATTRTKRB	Transfac Matys et al.(2006) V$FOXJ2_02	0.683	0.558
FOXJ2 M04810_2.00	Homo sapiens	NTRTTTACAAYANN	NNTRTTGTAAAYAN	SELEX Yin et al.(2017) FOXJ2_eDBD_Methyl-HT-SELEX	0.683	0.558
NCU06173 M01992_2.00	Neurospora crassa	RTAAACAH	DTGTTTAY	PBM Weirauch et al.(2014) pTH8896	0.680	0.581
FOXD4L4 M10564_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXD4L4_01	0.674	0.616
croc M03744_2.00	Drosophila melanogaster	WRYGTMAACAH	DTGTTKACRYW	SELEX Nitta et al.(2015) croc_1	0.672	0.663
croc M10571_2.00	Drosophila melanogaster	HWNARTAAATAKNNNV	BNNNMTATTTAYYNWD	Transfac Matys et al.(2006) I$CROC_01	0.672	0.663
FOXD3 M03044_2.00	Homo sapiens	NRTMAAYRTTWDYN	NRHWAAYRTTKAYN	SELEX Jolma et al.(2013) FOXD3_1	0.672	0.628
FOXD3 M03045_2.00	Homo sapiens	RTAAAYA	TRTTTAY	SELEX Jolma et al.(2013) FOXD3_2	0.672	0.628
FOXD3 M04855_2.00	Homo sapiens	VHWRHRTAMACW	WGTKTAYDYWDB	SELEX Yin et al.(2017) FOXD3_eDBD_HT-SELEX	0.672	0.628
Foxd3 M09114_2.00	Mus musculus	DVNWRDRNAAACAVN	NBTGTTTNYHYWNBH	Misc Kulakovskiy et al.(2013) FOXD3_MOUSE.H11MO.0.C	0.672	0.628
FOXD3 M10565_2.00	Homo sapiens	RADHAAAYAWWH	DWWTRTTTDHTY	Transfac Matys et al.(2006) V$FOXD3_01	0.672	0.628
FOXD3 M10566_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HFH2_Q5	0.672	0.628
FOXD3 M04856_2.00	Homo sapiens	VYWRHRTAAACW	WGTTTAYDYWRB	SELEX Yin et al.(2017) FOXD3_eDBD_Methyl-HT-SELEX	0.672	0.628
let-381 M00664_2.00	Caenorhabditis elegans	RTAAACAW	WTGTTTAY	PBM Narasimhan et al.(2015) pTH9057	0.671	0.547
FOXD2 M03042_2.00	Homo sapiens	NRTMAAYRTTWDYN	NRHWAAYRTTKAYN	SELEX Jolma et al.(2013) FOXD2_1	0.670	0.628
FOXD2 M03043_2.00	Homo sapiens	RTAAAYA	TRTTTAY	SELEX Jolma et al.(2013) FOXD2_2	0.670	0.628
FOXD2 M04851_2.00	Homo sapiens	HWASAATAAYAWWN	NWWTRTTATTSTWD	SELEX Yin et al.(2017) FOXD2_eDBD_HT-SELEX_1	0.670	0.628
FOXD2 M04852_2.00	Homo sapiens	VYWANRTAAAYAH	DTRTTTAYNTWRB	SELEX Yin et al.(2017) FOXD2_eDBD_HT-SELEX_2	0.670	0.628
FOXD1 M02681_2.00	Homo sapiens	GTAAACAD	HTGTTTAC	SELEX Mathelier et al.(2014) MA0031.1	0.670	0.628
Foxd1 M10570_2.00	Mus musculus	SYWAWGTAAACADHVN	NBDHTGTTTACWTWRS	Transfac Matys et al.(2006) V$FREAC4_01	0.670	0.628
FOXD1 M10567_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FREAC4_02	0.670	0.628
FOXD2 M04853_2.00	Homo sapiens	HWACAATAACRWWN	NWWYGTTATTGTWD	SELEX Yin et al.(2017) FOXD2_eDBD_Methyl-HT-SELEX_1	0.670	0.628
FOXD2 M04854_2.00	Homo sapiens	RYTRNGTMAACRD	HYGTTKACNYARY	SELEX Yin et al.(2017) FOXD2_eDBD_Methyl-HT-SELEX_2	0.670	0.628
FOXL2 M04847_2.00	Homo sapiens	NVBGHMAACAH	DTGTTKDCVBN	SELEX Yin et al.(2017) FOXL2_FL_HT-SELEX	0.670	0.698
Foxl2 M09112_2.00	Mus musculus	DWDWRTAAACA	TGTTTAYWHWH	Misc Kulakovskiy et al.(2013) FOXL2_MOUSE.H11MO.0.C	0.670	0.698
FOXL2 M10560_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXL2_Q2	0.670	0.698
FOXL2 M10561_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FOXL2_Q5	0.670	0.698
FOXL2 M04848_2.00	Homo sapiens	HVCGWMAACAH	DTGTTKWCGBD	SELEX Yin et al.(2017) FOXL2_FL_Methyl-HT-SELEX	0.670	0.698
Gm5294 M01984_2.00	Mus musculus	NNKRTAAACANN	NNTGTTTAYMNN	PBM Weirauch et al.(2014) pTH3802	0.668	0.605
fd59A M03739_2.00	Drosophila melanogaster	HWAWRTAAACAWW	WWTGTTTAYWTWD	SELEX Nitta et al.(2015) fd59A_1	0.668	0.628
fd59A M03740_2.00	Drosophila melanogaster	WWAVAATAACAHN	NDTGTTATTBTWW	SELEX Nitta et al.(2015) fd59A_2	0.668	0.628
fd59A M03741_2.00	Drosophila melanogaster	YWRWRTAAAYAHH	DDTRTTTAYWYWR	SELEX Nitta et al.(2015) fd59A_3	0.668	0.628
fd59A M03742_2.00	Drosophila melanogaster	MWACAAYAAYAHW	WDTRTTRTTGTWK	SELEX Nitta et al.(2015) fd59A_4	0.668	0.628
FOXF1 M10529_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$FKHL5_Q3	0.664	0.605
FOXF1 M10530_2.00	Homo sapiens	YRHATAAACAHNB	VNDTGTTTATDYR	Transfac Matys et al.(2006) V$HFH8_01	0.664	0.605
For this family, TFs with SR scores > 0.664* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSBTAP00000019467	Forkhead	124	213	RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNF

Links
Other Forkhead family TFs
Other *Bos taurus* TFs

1747 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
CRF2	Arabidopsis thaliana	AT4G23750	D
CRF3	Arabidopsis thaliana	AT5G53290	D
AMTR_s00026p00180130	Amborella trichopoda	AMTR_s00026p00180130	I
AMTR_s00097p00165740	Amborella trichopoda	AMTR_s00097p00165740	I
CRF1	Arabidopsis thaliana	AT4G11140	I
Bo1g037170	Brassica oleracea	Bo1g037170	I
Bo2g045930	Brassica oleracea	Bo2g045930	I
Bo3g022760	Brassica oleracea	Bo3g022760	I
Bo3g045150	Brassica oleracea	Bo3g045150	I
Bo7g109100	Brassica oleracea	Bo7g109100	I
Bo9g111050	Brassica oleracea	Bo9g111050	I
Bra003068	Brassica rapa	Bra003068	I
Bra013730	Brassica rapa	Bra013730	I
Bra019270	Brassica rapa	Bra019270	I
Bra022643	Brassica rapa	Bra022643	I
Bra029079	Brassica rapa	Bra029079	I
BRADI3G18070	Brachypodium distachyon	BRADI3G18070	I
CRF1	Arabidopsis lyrata	fgenesh2_kg.6__3086__AT4G11140.1	I
CRF2	Arabidopsis lyrata	fgenesh2_kg.7__1924__AT4G23750.1	I
GLYMA01G43350	Glycine max	GLYMA01G43350	I
GLYMA02G40320	Glycine max	GLYMA02G40320	I
GLYMA03G23330	Glycine max	GLYMA03G23330	I
GLYMA04G41740	Glycine max	GLYMA04G41740	I
GLYMA05G37120	Glycine max	GLYMA05G37120	I
GLYMA06G13040	Glycine max	GLYMA06G13040	I
GLYMA07G03041	Glycine max	GLYMA07G03041	I
GLYMA08G02460	Glycine max	GLYMA08G02460	I
GLYMA08G23074	Glycine max	GLYMA08G23074	I
GLYMA11G02140	Glycine max	GLYMA11G02140	I
GLYMA11G31401	Glycine max	GLYMA11G31401	I
GLYMA13G08490	Glycine max	GLYMA13G08490	I
MTR_3g090760	Medicago truncatula	MTR_3g090760	I
MTR_4g009260	Medicago truncatula	MTR_4g009260	I
MTR_8g099215	Medicago truncatula	MTR_8g099215	I
PGSC0003DMG400002350	Solanum tuberosum	PGSC0003DMG400002350	I
PGSC0003DMG400012305	Solanum tuberosum	PGSC0003DMG400012305	I
PGSC0003DMG400036493	Solanum tuberosum	PGSC0003DMG400036493	I
POPTR_0001s10300	Populus trichocarpa	POPTR_0001s10300	I
POPTR_0001s32050	Populus trichocarpa	POPTR_0001s32050	I
POPTR_0003s13610	Populus trichocarpa	POPTR_0003s13610	I
POPTR_0012s01260	Populus trichocarpa	POPTR_0012s01260	I
POPTR_0013s15440	Populus trichocarpa	POPTR_0013s15440	I
POPTR_0014s09020	Populus trichocarpa	POPTR_0014s09020	I
POPTR_0015s06070	Populus trichocarpa	POPTR_0015s06070	I
POPTR_0017s08090	Populus trichocarpa	POPTR_0017s08090	I
PRUPE_ppa008720mg	Prunus persica	PRUPE_ppa008720mg	I
PRUPE_ppa020928mg	Prunus persica	PRUPE_ppa020928mg	I
PRUPE_ppa025804mg	Prunus persica	PRUPE_ppa025804mg	I
CRF3	Arabidopsis lyrata	scaffold_801806.1	I
Solyc01g095500.2	Solanum lycopersicum	Solyc01g095500.2	I
Solyc03g007460.1	Solanum lycopersicum	Solyc03g007460.1	I
Solyc06g051840.1	Solanum lycopersicum	Solyc06g051840.1	I
Solyc08g081960.1	Solanum lycopersicum	Solyc08g081960.1	I
TCM_005203	Theobroma cacao	TCM_005203	I
TCM_015336	Theobroma cacao	TCM_015336	I
TCM_016396	Theobroma cacao	TCM_016396	I
TCM_027348	Theobroma cacao	TCM_027348	I
VIT_06s0004g08190	Vitis vinifera	VIT_06s0004g08190	I
VIT_09s0002g08830	Vitis vinifera	VIT_09s0002g08830	I
VIT_16s0050g02400	Vitis vinifera	VIT_16s0050g02400	I
Ca_03948	Cicer arietinum	Ca_03948	I
Ca_05803	Cicer arietinum	Ca_05803	I
Ca_20041	Cicer arietinum	Ca_20041	I
Cla004291	Citrullus lanatus	Cla004291	I
Cla011108	Citrullus lanatus	Cla011108	I
Cla011573	Citrullus lanatus	Cla011573	I
Cla015583	Citrullus lanatus	Cla015583	I
Pm013734	Prunus mume	Pm013734	I
Pm019793	Prunus mume	Pm019793	I
Pm024096	Prunus mume	Pm024096	I
27446.m000475	Ricinus communis	27446.m000475	I
28641.m000082	Ricinus communis	28641.m000082	I
30169.m006542	Ricinus communis	30169.m006542	I
30190.m010791	Ricinus communis	30190.m010791	I
cassava12291.valid.m1	Manihot esculenta	cassava12291.valid.m1	I
cassava27467.m1	Manihot esculenta	cassava27467.m1	I
cassava32471.m1	Manihot esculenta	cassava32471.m1	I
cassava38416.m1	Manihot esculenta	cassava38416.m1	I
cassava39307.m1	Manihot esculenta	cassava39307.m1	I
cassava7228.valid.m1	Manihot esculenta	cassava7228.valid.m1	I
Cucsa.012850	Cucumis sativus	Cucsa.012850	I
Cucsa.105790	Cucumis sativus	Cucsa.105790	I
Cucsa.107190	Cucumis sativus	Cucsa.107190	I
Cucsa.303720	Cucumis sativus	Cucsa.303720	I
fgenesh1_pg.scaffold_23000002	Physcomitrella patens	fgenesh1_pg.scaffold_23000002	I
mgf008137m	Mimulus guttatus	mgf008137m	I
mgf018116m	Mimulus guttatus	mgf018116m	I
mgf023662m	Mimulus guttatus	mgf023662m	I
mgf023807m	Mimulus guttatus	mgf023807m	I
Aquca_037_00045	Aquilegia coerulea	Aquca_037_00045	I
Bostr.25463s0212	Boechera stricta	Bostr.25463s0212	I
Bostr.26833s0952	Boechera stricta	Bostr.26833s0952	I
Bostr.7867s0178	Boechera stricta	Bostr.7867s0178	I
Cagra.0084s0074	Capsella grandiflora	Cagra.0084s0074	I
Cagra.1226s0039	Capsella grandiflora	Cagra.1226s0039	I
Carubv10001539m.g	Capsella rubella	Carubv10001539m.g	I
Carubv10005160m.g	Capsella rubella	Carubv10005160m.g	I
Carubv10026682m.g	Capsella rubella	Carubv10026682m.g	I
Ciclev10005220m.g	Citrus clementina	Ciclev10005220m.g	I
Ciclev10021073m.g	Citrus clementina	Ciclev10021073m.g	I
Ciclev10027171m.g	Citrus clementina	Ciclev10027171m.g	I
Eucgr.A02669	Eucalyptus grandis	Eucgr.A02669	I
Eucgr.K00321	Eucalyptus grandis	Eucgr.K00321	I
evm.TU.supercontig_10.125	Carica papaya	evm.TU.supercontig_10.125	I
evm.TU.supercontig_122.27	Carica papaya	evm.TU.supercontig_122.27	I
gene13118-v1.0-hybrid	Fragaria vesca	gene13118-v1.0-hybrid	I
gene15953-v1.0-hybrid	Fragaria vesca	gene15953-v1.0-hybrid	I
gene18922-v1.0-hybrid	Fragaria vesca	gene18922-v1.0-hybrid	I
Gorai.003G082200	Gossypium raimondii	Gorai.003G082200	I
Gorai.004G135700	Gossypium raimondii	Gorai.004G135700	I
Gorai.006G107500	Gossypium raimondii	Gorai.006G107500	I
Gorai.006G200400	Gossypium raimondii	Gorai.006G200400	I
Gorai.007G105600	Gossypium raimondii	Gorai.007G105600	I
Gorai.007G105700	Gossypium raimondii	Gorai.007G105700	I
Gorai.008G252300	Gossypium raimondii	Gorai.008G252300	I
Gorai.008G271200	Gossypium raimondii	Gorai.008G271200	I
Lus10027573.g	Linum usitatissimum	Lus10027573.g	I
Lus10039324.g	Linum usitatissimum	Lus10039324.g	I
Lus10043182.g	Linum usitatissimum	Lus10043182.g	I
MDP0000229285	Malus domestica	MDP0000229285	I
MDP0000264187	Malus domestica	MDP0000264187	I
MDP0000308379	Malus domestica	MDP0000308379	I
MDP0000783818	Malus domestica	MDP0000783818	I
MDP0000854039	Malus domestica	MDP0000854039	I
orange1.1g036154m.g	Citrus sinensis	orange1.1g036154m.g	I
orange1.1g047455m.g	Citrus sinensis	orange1.1g047455m.g	I
orange1.1g047950m.g	Citrus sinensis	orange1.1g047950m.g	I
SapurV1A.0013s0740	Salix purpurea	SapurV1A.0013s0740	I
SapurV1A.0035s0790	Salix purpurea	SapurV1A.0035s0790	I
SapurV1A.0058s0710	Salix purpurea	SapurV1A.0058s0710	I
SapurV1A.0237s0040	Salix purpurea	SapurV1A.0237s0040	I
SapurV1A.1000s0130	Salix purpurea	SapurV1A.1000s0130	I
SapurV1A.1017s0070	Salix purpurea	SapurV1A.1017s0070	I
SapurV1A.1043s0120	Salix purpurea	SapurV1A.1043s0120	I
SapurV1A.1111s0070	Salix purpurea	SapurV1A.1111s0070	I
SapurV1A.1442s0010	Salix purpurea	SapurV1A.1442s0010	I
SapurV1A.2151s0020	Salix purpurea	SapurV1A.2151s0020	I
Thhalv10001561m.g	Eutrema salsugineum	Thhalv10001561m.g	I
Thhalv10013898m.g	Eutrema salsugineum	Thhalv10013898m.g	I
Thhalv10026857m.g	Eutrema salsugineum	Thhalv10026857m.g	I
Thhalv10029132m.g	Eutrema salsugineum	Thhalv10029132m.g	I
PK16787.1	Cannabis sativa	PK16787.1	I
PK28823.1	Cannabis sativa	PK28823.1	I
LjSGA_008718.1	Lotus japonicus	LjSGA_008718.1	I
ERF084	Arabidopsis thaliana	AT1G80580	N
BGIOSGA019608	Oryza indica	BGIOSGA019608	N
Bra008460	Brassica rapa	Bra008460	N
fgenesh1_pm.C_scaffold_2001935	Arabidopsis lyrata	fgenesh1_pm.C_scaffold_2001935	N
OMERI05G10040	Oryza meridionalis	OMERI05G10040	N
ONIVA05G11840	Oryza nivara	ONIVA05G11840	N
ORUFI05G12300	Oryza rufipogon	ORUFI05G12300	N
OS05G0316800	Oryza sativa	OS05G0316800	N
PGSC0003DMG400010135	Solanum tuberosum	PGSC0003DMG400010135	N
Solyc03g117230.1	Solanum lycopersicum	Solyc03g117230.1	N
Bostr.20129s0456	Boechera stricta	Bostr.20129s0456	N
Cagra.1725s0082	Capsella grandiflora	Cagra.1725s0082	N
Carubv10022119m.g	Capsella rubella	Carubv10022119m.g	N
Eucgr.F03941	Eucalyptus grandis	Eucgr.F03941	N
Gorai.009G125700	Gossypium raimondii	Gorai.009G125700	N
Lus10014345.g	Linum usitatissimum	Lus10014345.g	N
Lus10026053.g	Linum usitatissimum	Lus10026053.g	N
Thhalv10000556m.g	Eutrema salsugineum	Thhalv10000556m.g	N
Thhalv10019474m.g	Eutrema salsugineum	Thhalv10019474m.g	N

FOXI1 (Bos taurus) Forkhead

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1747 Related TFs

FOXI1 **(Bos taurus)
Forkhead**