Lus10026053.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10026053.g T008852_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10026053 AP2 81 132

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10014345.g Linum usitatissimum Lus10014345.g N 0.859
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I 0.816
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I 0.815
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N 0.809
Pm013734 Prunus mume Pm013734 I 0.808
MDP0000264187 Malus domestica MDP0000264187 I 0.808
MTR_4g009260 Medicago truncatula MTR_4g009260 I 0.805
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I 0.805
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I 0.805
Gorai.009G125700 Gossypium raimondii Gorai.009G125700 N 0.804
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N 0.797
Thhalv10019474m.g Eutrema salsugineum Thhalv10019474m.g N 0.797
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I 0.796
TCM_027348 Theobroma cacao TCM_027348 I 0.796
AMTR_s00026p00180130 Amborella trichopoda AMTR_s00026p00180130 I 0.794
Bra008460 Brassica rapa Bra008460 N 0.794
GLYMA08G23074 Glycine max GLYMA08G23074 I 0.793
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I 0.791
Cla015583 Citrullus lanatus Cla015583 I 0.791
27446.m000475 Ricinus communis 27446.m000475 I 0.791
cassava38416.m1 Manihot esculenta cassava38416.m1 I 0.791
Cucsa.105790 Cucumis sativus Cucsa.105790 I 0.791
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I 0.791
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I 0.790
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I 0.789
mgf023662m Mimulus guttatus mgf023662m I 0.789
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I 0.789
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I 0.789
GLYMA07G03041 Glycine max GLYMA07G03041 I 0.786
Ca_20041 Cicer arietinum Ca_20041 I 0.780
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N 0.777
ERF084 Arabidopsis thaliana AT1G80580 N 0.768
fgenesh1_pm.C_scaffold_2001935 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001935 N 0.768
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N 0.768
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N 0.768
Carubv10022119m.g Capsella rubella Carubv10022119m.g N 0.768
e_gw1.145.79.1 Physcomitrella patens e_gw1.145.79.1 N 0.763
SELMODRAFT_412693 Selaginella moellendorffii SELMODRAFT_412693 N 0.759
SELMODRAFT_417258 Selaginella moellendorffii SELMODRAFT_417258 N 0.759
SELMODRAFT_428344 Selaginella moellendorffii SELMODRAFT_428344 N 0.755
SELMODRAFT_428599 Selaginella moellendorffii SELMODRAFT_428599 N 0.755
gw1.204.54.1 Physcomitrella patens gw1.204.54.1 N 0.751
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I 0.748
Bo2g095830 Brassica oleracea Bo2g095830 N 0.747
e_gw1.15.234.1 Physcomitrella patens e_gw1.15.234.1 N 0.746
e_gw1.14.213.1 Physcomitrella patens e_gw1.14.213.1 N 0.743
PGSC0003DMG400010135 Solanum tuberosum PGSC0003DMG400010135 N 0.741
e_gw1.276.69.1 Physcomitrella patens e_gw1.276.69.1 N 0.738
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I 0.731
Solyc01g095500.2 Solanum lycopersicum Solyc01g095500.2 I 0.724
BGIOSGA019608 Oryza indica BGIOSGA019608 N 0.719
OMERI05G10040 Oryza meridionalis OMERI05G10040 N 0.719
ONIVA05G11840 Oryza nivara ONIVA05G11840 N 0.719
ORUFI05G12300 Oryza rufipogon ORUFI05G12300 N 0.719
OS05G0316800 Oryza sativa OS05G0316800 N 0.719
Cucsa.201950 Cucumis sativus Cucsa.201950 I 0.713
PGSC0003DMG400000091 Solanum tuberosum PGSC0003DMG400000091 I 0.706
Cla004992 Citrullus lanatus Cla004992 I 0.705
GSMUA_AchrUn_randomG16100_001 Musa acuminata GSMUA_AchrUn_randomG16100_001 I 0.690
Ca_05803 Cicer arietinum Ca_05803 I 0.687
Solyc03g006320.1 Solanum lycopersicum Solyc03g006320.1 I 0.686
gw1.340.39.1 Physcomitrella patens gw1.340.39.1 N 0.681
Eucgr.A02669 Eucalyptus grandis Eucgr.A02669 I 0.681
Gorai.004G220800 Gossypium raimondii Gorai.004G220800 I 0.680
GLYMA11G02140 Glycine max GLYMA11G02140 I 0.677
gene13118-v1.0-hybrid Fragaria vesca gene13118-v1.0-hybrid I 0.677
Lus10006579.g Linum usitatissimum Lus10006579.g I 0.677