gw1.204.54.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.204.54.1 T007273_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.204.54.1 AP2 1 50

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_428599 Selaginella moellendorffii SELMODRAFT_428599 N 0.843
SELMODRAFT_417258 Selaginella moellendorffii SELMODRAFT_417258 N 0.843
SELMODRAFT_428344 Selaginella moellendorffii SELMODRAFT_428344 N 0.843
SELMODRAFT_412693 Selaginella moellendorffii SELMODRAFT_412693 N 0.843
e_gw1.145.79.1 Physcomitrella patens e_gw1.145.79.1 N 0.825
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I 0.825
e_gw1.15.234.1 Physcomitrella patens e_gw1.15.234.1 N 0.816
e_gw1.14.213.1 Physcomitrella patens e_gw1.14.213.1 N 0.816
TCM_027348 Theobroma cacao TCM_027348 I 0.808
AMTR_s00026p00180130 Amborella trichopoda AMTR_s00026p00180130 I 0.808
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I 0.805
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I 0.805
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I 0.805
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I 0.803
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I 0.802
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I 0.802
mgf023662m Mimulus guttatus mgf023662m I 0.802
Cucsa.105790 Cucumis sativus Cucsa.105790 I 0.802
Cla015583 Citrullus lanatus Cla015583 I 0.802
Ca_20041 Cicer arietinum Ca_20041 I 0.802
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I 0.802
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I 0.802
MTR_4g009260 Medicago truncatula MTR_4g009260 I 0.802
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I 0.802
GLYMA08G23074 Glycine max GLYMA08G23074 I 0.799
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I 0.799
MDP0000264187 Malus domestica MDP0000264187 I 0.799
Pm013734 Prunus mume Pm013734 I 0.799
27446.m000475 Ricinus communis 27446.m000475 I 0.799
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I 0.799
cassava38416.m1 Manihot esculenta cassava38416.m1 I 0.799
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N 0.797
e_gw1.276.69.1 Physcomitrella patens e_gw1.276.69.1 N 0.794
GLYMA07G03041 Glycine max GLYMA07G03041 I 0.792
ERF084 Arabidopsis thaliana AT1G80580 N 0.783
Carubv10022119m.g Capsella rubella Carubv10022119m.g N 0.783
fgenesh1_pm.C_scaffold_2001935 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001935 N 0.783
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N 0.783
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N 0.783
Gorai.009G125700 Gossypium raimondii Gorai.009G125700 N 0.782
Thhalv10019474m.g Eutrema salsugineum Thhalv10019474m.g N 0.779
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N 0.779
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N 0.779
gw1.340.39.1 Physcomitrella patens gw1.340.39.1 N 0.778
Bra008460 Brassica rapa Bra008460 N 0.772
PGSC0003DMG400010135 Solanum tuberosum PGSC0003DMG400010135 N 0.761
Lus10026053.g Linum usitatissimum Lus10026053.g N 0.751
Lus10014345.g Linum usitatissimum Lus10014345.g N 0.751
Bo2g095830 Brassica oleracea Bo2g095830 N 0.731
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.716
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.714
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.704
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.704
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.704
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.704
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.702
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.702
Solyc12g005960.1 Solanum lycopersicum Solyc12g005960.1 I 0.699
PGSC0003DMG401013892 Solanum tuberosum PGSC0003DMG401013892 I 0.699
PGSC0003DMG402013892 Solanum tuberosum PGSC0003DMG402013892 I 0.699
Bostr.26675s0388 Boechera stricta Bostr.26675s0388 I 0.698
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.693
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.693
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.691
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.691
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.691
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.691
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.691
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.691
GRMZM2G020150 Zea mays GRMZM2G020150 I 0.689
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.689
Eucgr.K00734 Eucalyptus grandis Eucgr.K00734 I 0.689
GRMZM2G174347 Zea mays GRMZM2G174347 I 0.688
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.688
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I 0.686
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.686
Bostr.15697s0157 Boechera stricta Bostr.15697s0157 I 0.685
SELMODRAFT_17648 Selaginella moellendorffii SELMODRAFT_17648 I 0.682
SELMODRAFT_129122 Selaginella moellendorffii SELMODRAFT_129122 I 0.682
GLYMA12G13315 Glycine max GLYMA12G13315 I 0.681
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.678
cassava34729.m1 Manihot esculenta cassava34729.m1 I 0.677