CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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tetur10g00270
(
Tetranychus urticae
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
tetur10g00270
T188669_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN
NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.822
0.877
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA
TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.822
0.877
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA
TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.822
0.877
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN
NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.822
0.877
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.822
0.877
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.822
0.877
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM
KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.822
0.877
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.822
0.877
FOXP1
M10536_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.822
0.877
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.822
0.877
Foxp2
M00792_2.00
Mus musculus
RTAAACAD
HTGTTTAY
PBM
Weirauch et al.(2013)
pTH1288
0.745
0.815
FOXP2
M05866_2.00
Homo sapiens
RTAAAYAWNN
NNWTRTTTAY
SMiLE-seq
Isakova et al.(2017)
FOXP2
0.745
0.815
FOXP2
M08116_2.00
Homo sapiens
NDGTAAACAVN
NBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0593.1
0.745
0.815
FOXP2
M09089_2.00
Homo sapiens
DGTAAACAV
BTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C
0.745
0.815
Foxp2
M09101_2.00
Mus musculus
NGTAAACAN
NTGTTTACN
Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A
0.745
0.815
FoxP
M03753_2.00
Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT
SELEX
Nitta et al.(2015)
CG16899_1
0.739
0.790
FoxP
M06201_2.00
Drosophila melanogaster
VRTAAACAA
TTGTTTAYB
B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735
0.739
0.790
FoxP
M06202_2.00
Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB
B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905
0.739
0.790
FoxP
M06203_2.00
Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN
B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905
0.739
0.790
Foxj3
M00160_2.00
Mus musculus
NRTAAACAHN
NDTGTTTAYN
PBM
Badis et al.(2009)
Foxj3_0982
0.677
0.444
Foxj3
M01981_2.00
Mus musculus
VNHHAYANN
NNTRTDDNB
PBM
Weirauch et al.(2014)
pTH6591
0.677
0.444
Foxj3
M03055_2.00
Mus musculus
ACGGACACAAT
ATTGTGTCCGT
SELEX
Jolma et al.(2013)
Foxj3_1
0.677
0.444
Foxj3
M03056_2.00
Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
Foxj3_2
0.677
0.444
Foxj3
M03057_2.00
Mus musculus
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_3
0.677
0.444
Foxj3
M03058_2.00
Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_4
0.677
0.444
Foxj3
M09102_2.00
Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A
0.677
0.444
FOXJ3
M03046_2.00
Homo sapiens
RTAAAVAA
TTBTTTAY
SELEX
Jolma et al.(2013)
FOXJ3_1
0.676
0.444
FOXJ3
M03047_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_2
0.676
0.444
FOXJ3
M03048_2.00
Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_3
0.676
0.444
FOXJ3
M02736_2.00
Homo sapiens
AAACAATAAACA
TGTTTATTGTTT
SELEX
Jolma et al.(2010)
FOXJ3_dimer
0.676
0.444
FOXJ3
M02737_2.00
Homo sapiens
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2010)
FOXJ3_monomer
0.676
0.444
FOXJ3
M04859_2.00
Homo sapiens
DYGTMAACAH
DTGTTKACRH
SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX
0.676
0.444
FOXJ3
M09098_2.00
Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A
0.676
0.444
FOXJ3
M04860_2.00
Homo sapiens
RYGTMAACAH
DTGTTKACRY
SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX
0.676
0.444
SPU_007644
M01987_2.00
Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN
PBM
Weirauch et al.(2014)
pTH6497
0.666
0.444
Foxc2
M00796_2.00
Mus musculus
HNNRHMAAYA
TRTTKDYNND
PBM
Weirauch et al.(2013)
pTH3796
0.665
0.444
FOXC2
M03036_2.00
Homo sapiens
NRTMAATATTDWYN
NRWHAATATTKAYN
SELEX
Jolma et al.(2013)
FOXC2_1
0.665
0.444
FOXC2
M03037_2.00
Homo sapiens
RTAAAYAAACA
TGTTTRTTTAY
SELEX
Jolma et al.(2013)
FOXC2_2
0.665
0.444
FOXC2
M03038_2.00
Homo sapiens
WAHRTMAAYAWW
WWTRTTKAYDTW
SELEX
Jolma et al.(2013)
FOXC2_3
0.665
0.444
FOXC2
M04841_2.00
Homo sapiens
NHVNRYMAACAH
DTGTTKRYNBDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1
0.665
0.444
FOXC2
M04842_2.00
Homo sapiens
RHAMAYAAACAH
DTGTTTRTKTDY
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2
0.665
0.444
FOXC2
M10559_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL14_Q2
0.665
0.444
FOXC2
M04843_2.00
Homo sapiens
NHNNRYMAACAN
NTGTTKRYNNDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1
0.665
0.444
FOXC2
M04844_2.00
Homo sapiens
VHMMAYAAACAN
NTGTTTRTKKDB
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2
0.665
0.444
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
tetur10g00270.1
Forkhead
590
672
RPPFTYASLIRQAIIEAPEKQLTLNEIYNWFQNTFCFFRRNAATWKNAVRHNLSLHKCFMRVENVKGAVWTVDELEFYKRRPQ
Links
Other
Forkhead
family TFs
Other
Tetranychus urticae
TFs
521 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPRI1
Arabidopsis thaliana
AT2G20570
D
APRR2
Arabidopsis thaliana
AT4G18020
D
AMTR_s00058p00133630
Amborella trichopoda
AMTR_s00058p00133630
I
AMTR_s00149p00035260
Amborella trichopoda
AMTR_s00149p00035260
I
GLK2
Arabidopsis thaliana
AT5G44190
I
Bo1g019180
Brassica oleracea
Bo1g019180
I
Bo7g105690
Brassica oleracea
Bo7g105690
I
Bra012623
Brassica rapa
Bra012623
I
Bra013277
Brassica rapa
Bra013277
I
Bra013278
Brassica rapa
Bra013278
I
Bra013279
Brassica rapa
Bra013279
I
GPRI1
Arabidopsis lyrata
fgenesh2_kg.3__3588__AT2G20570.1
I
APRR2
Arabidopsis lyrata
fgenesh2_kg.7__2503__AT4G18020.2
I
fgenesh2_kg.8__391__AT5G44190.1
Arabidopsis lyrata
fgenesh2_kg.8__391__AT5G44190.1
I
GLYMA01G40900
Glycine max
GLYMA01G40900
I
GLYMA05G06070
Glycine max
GLYMA05G06070
I
GLYMA11G04441
Glycine max
GLYMA11G04441
I
GLYMA17G16360
Glycine max
GLYMA17G16360
I
GSMUA_Achr11G17740_001
Musa acuminata
GSMUA_Achr11G17740_001
I
GSMUA_Achr2G18200_001
Musa acuminata
GSMUA_Achr2G18200_001
I
MTR_4g098870
Medicago truncatula
MTR_4g098870
I
MTR_5g014040
Medicago truncatula
MTR_5g014040
I
PGSC0003DMG400024217
Solanum tuberosum
PGSC0003DMG400024217
I
PGSC0003DMG400026587
Solanum tuberosum
PGSC0003DMG400026587
I
POPTR_0001s02910
Populus trichocarpa
POPTR_0001s02910
I
POPTR_0003s08600
Populus trichocarpa
POPTR_0003s08600
I
POPTR_0007s01230
Populus trichocarpa
POPTR_0007s01230
I
POPTR_0017s04720
Populus trichocarpa
POPTR_0017s04720
I
PRUPE_ppa004161mg
Prunus persica
PRUPE_ppa004161mg
I
PRUPE_ppa014599mg
Prunus persica
PRUPE_ppa014599mg
I
SELMODRAFT_428906
Selaginella moellendorffii
SELMODRAFT_428906
I
Solyc06g061030.2
Solanum lycopersicum
Solyc06g061030.2
I
Solyc08g077230.2
Solanum lycopersicum
Solyc08g077230.2
I
TCM_008193
Theobroma cacao
TCM_008193
I
TCM_015780
Theobroma cacao
TCM_015780
I
APRR2
Vitis vinifera
VIT_02s0012g00570
I
Ca_02285
Cicer arietinum
Ca_02285
I
Ca_12825
Cicer arietinum
Ca_12825
I
Ca_24009
Cicer arietinum
Ca_24009
I
Cla003791
Citrullus lanatus
Cla003791
I
Cla008926
Citrullus lanatus
Cla008926
I
Cla016403
Citrullus lanatus
Cla016403
I
Pm014123
Prunus mume
Pm014123
I
Pm014733
Prunus mume
Pm014733
I
29983.m003131
Ricinus communis
29983.m003131
I
30054.m000786
Ricinus communis
30054.m000786
I
cassava2466.valid.m1
Manihot esculenta
cassava2466.valid.m1
I
cassava42047.valid.m1
Manihot esculenta
cassava42047.valid.m1
I
cassava42048.valid.m1
Manihot esculenta
cassava42048.valid.m1
I
cassava43649.valid.m1
Manihot esculenta
cassava43649.valid.m1
I
cassava43650.valid.m1
Manihot esculenta
cassava43650.valid.m1
I
Cucsa.087530
Cucumis sativus
Cucsa.087530
I
Cucsa.313480
Cucumis sativus
Cucsa.313480
I
Cucsa.321580
Cucumis sativus
Cucsa.321580
I
mgf007181m
Mimulus guttatus
mgf007181m
I
mgf012846m
Mimulus guttatus
mgf012846m
I
Aquca_044_00072
Aquilegia coerulea
Aquca_044_00072
I
Bostr.30275s0270
Boechera stricta
Bostr.30275s0270
I
Bostr.3148s0040
Boechera stricta
Bostr.3148s0040
I
Bostr.7903s0106
Boechera stricta
Bostr.7903s0106
I
Cagra.0381s0008
Capsella grandiflora
Cagra.0381s0008
I
Cagra.1595s0002
Capsella grandiflora
Cagra.1595s0002
I
Cagra.2516s0014
Capsella grandiflora
Cagra.2516s0014
I
Carubv10004540m.g
Capsella rubella
Carubv10004540m.g
I
Carubv10014114m.g
Capsella rubella
Carubv10014114m.g
I
Carubv10026528m.g
Capsella rubella
Carubv10026528m.g
I
Ciclev10015266m.g
Citrus clementina
Ciclev10015266m.g
I
Ciclev10031120m.g
Citrus clementina
Ciclev10031120m.g
I
Eucgr.E00308
Eucalyptus grandis
Eucgr.E00308
I
Eucgr.K01056
Eucalyptus grandis
Eucgr.K01056
I
evm.TU.supercontig_6.428
Carica papaya
evm.TU.supercontig_6.428
I
gene10484-v1.0-hybrid
Fragaria vesca
gene10484-v1.0-hybrid
I
gene17750-v1.0-hybrid
Fragaria vesca
gene17750-v1.0-hybrid
I
Gorai.002G020300
Gossypium raimondii
Gorai.002G020300
I
Gorai.003G180100
Gossypium raimondii
Gorai.003G180100
I
Gorai.004G188300
Gossypium raimondii
Gorai.004G188300
I
Gorai.008G228800
Gossypium raimondii
Gorai.008G228800
I
Gorai.012G126600
Gossypium raimondii
Gorai.012G126600
I
Lus10003013.g
Linum usitatissimum
Lus10003013.g
I
Lus10011044.g
Linum usitatissimum
Lus10011044.g
I
Lus10018649.g
Linum usitatissimum
Lus10018649.g
I
Lus10030938.g
Linum usitatissimum
Lus10030938.g
I
Lus10033642.g
Linum usitatissimum
Lus10033642.g
I
Lus10039883.g
Linum usitatissimum
Lus10039883.g
I
Lus10040109.g
Linum usitatissimum
Lus10040109.g
I
MDP0000225179
Malus domestica
MDP0000225179
I
MDP0000237396
Malus domestica
MDP0000237396
I
MDP0000248863
Malus domestica
MDP0000248863
I
MDP0000526864
Malus domestica
MDP0000526864
I
orange1.1g008254m.g
Citrus sinensis
orange1.1g008254m.g
I
orange1.1g013528m.g
Citrus sinensis
orange1.1g013528m.g
I
SapurV1A.0118s0260
Salix purpurea
SapurV1A.0118s0260
I
SapurV1A.0132s0010
Salix purpurea
SapurV1A.0132s0010
I
SapurV1A.0693s0070
Salix purpurea
SapurV1A.0693s0070
I
SapurV1A.1296s0050
Salix purpurea
SapurV1A.1296s0050
I
SapurV1A.1950s0030
Salix purpurea
SapurV1A.1950s0030
I
Thhalv10003223m.g
Eutrema salsugineum
Thhalv10003223m.g
I
Thhalv10024919m.g
Eutrema salsugineum
Thhalv10024919m.g
I
PK19826.1
Cannabis sativa
PK19826.1
I
PK27491.1
Cannabis sativa
PK27491.1
I
chr2.CM0021.770.nc
Lotus japonicus
chr2.CM0021.770.nc
I
chr4.CM0831.100.nd
Lotus japonicus
chr4.CM0831.100.nd
I
PDK_20s1585631g001
Phoenix dactylifera
PDK_20s1585631g001
I