Sakowv30028437m.g (Saccoglossus kowalevskii)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 Sakowv30028437m.g T189399_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Foxj1
M00161_2.00 		Mus musculus
NNHAAACAAANN
NNTTTGTTTDNN		 PBM
Badis et al.(2009)
Foxj1_3125 		0.845 0.756
FOXJ1
M10547_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HFH4_01 		0.845 0.756
FOXJ3
M03046_2.00 		Homo sapiens
RTAAAVAA
TTBTTTAY		 SELEX
Jolma et al.(2013)
FOXJ3_1 		0.669 0.593
FOXJ3
M03047_2.00 		Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_2 		0.669 0.593
FOXJ3
M03048_2.00 		Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC		 SELEX
Jolma et al.(2013)
FOXJ3_3 		0.669 0.593
FOXJ3
M02736_2.00 		Homo sapiens
AAACAATAAACA
TGTTTATTGTTT		 SELEX
Jolma et al.(2010)
FOXJ3_dimer 		0.669 0.593
FOXJ3
M02737_2.00 		Homo sapiens
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2010)
FOXJ3_monomer 		0.669 0.593
FOXJ3
M04859_2.00 		Homo sapiens
DYGTMAACAH
DTGTTKACRH		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX 		0.669 0.593
FOXJ3
M09098_2.00 		Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A 		0.669 0.593
FOXJ3
M04860_2.00 		Homo sapiens
RYGTMAACAH
DTGTTKACRY		 SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX 		0.669 0.593
Foxj3
M00160_2.00 		Mus musculus
NRTAAACAHN
NDTGTTTAYN		 PBM
Badis et al.(2009)
Foxj3_0982 		0.668 0.593
Foxj3
M01981_2.00 		Mus musculus
VNHHAYANN
NNTRTDDNB		 PBM
Weirauch et al.(2014)
pTH6591 		0.668 0.593
Foxj3
M03055_2.00 		Mus musculus
ACGGACACAAT
ATTGTGTCCGT		 SELEX
Jolma et al.(2013)
Foxj3_1 		0.668 0.593
Foxj3
M03056_2.00 		Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC		 SELEX
Jolma et al.(2013)
Foxj3_2 		0.668 0.593
Foxj3
M03057_2.00 		Mus musculus
RTAAACAW
WTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_3 		0.668 0.593
Foxj3
M03058_2.00 		Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY		 SELEX
Jolma et al.(2013)
Foxj3_4 		0.668 0.593
Foxj3
M09102_2.00 		Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW		 Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A 		0.668 0.593
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23917014_peptide Forkhead 120 209

Links

Other Forkhead family TFs
Other Saccoglossus kowalevskii TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB58 Arabidopsis thaliana AT1G16490 D 0.000
ATMYB63 Arabidopsis thaliana AT1G79180 D 0.000
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.000
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.000
MYB14 Arabidopsis thaliana AT2G31180 I 0.000
Bo5g007320 Brassica oleracea Bo5g007320 I 0.000
Bo6g081140 Brassica oleracea Bo6g081140 I 0.000
Bo6g122640 Brassica oleracea Bo6g122640 I 0.000
Bo8g105490 Brassica oleracea Bo8g105490 I 0.000
Bra003619 Brassica rapa Bra003619 I 0.000
Bra015481 Brassica rapa Bra015481 I 0.000
Bra026720 Brassica rapa Bra026720 I 0.000
Bra035097 Brassica rapa Bra035097 I 0.000
BRADI5G15760 Brachypodium distachyon BRADI5G15760 I 0.000
ATMYB58 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001492 I 0.000
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I 0.000
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.000
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.000
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.000
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.000
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.000
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.000
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.000
GLYMA15G41255 Glycine max GLYMA15G41255 I 0.000
GRMZM2G048295 Zea mays GRMZM2G048295 I 0.000
GSMUA_Achr11G17870_001 Musa acuminata GSMUA_Achr11G17870_001 I 0.000
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.000
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.000
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.000
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.000
MTR_1g043080 Medicago truncatula MTR_1g043080 I 0.000
MTR_2g067420 Medicago truncatula MTR_2g067420 I 0.000
OB04G25860 Oryza brachyantha OB04G25860 I 0.000
ONIVA04G17140 Oryza nivara ONIVA04G17140 I 0.000
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.000
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.000
PGSC0003DMG400011243 Solanum tuberosum PGSC0003DMG400011243 I 0.000
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I 0.000
PGSC0003DMG400038913 Solanum tuberosum PGSC0003DMG400038913 I 0.000
POPTR_0002s03960 Populus trichocarpa POPTR_0002s03960 I 0.000
POPTR_0008s16660 Populus trichocarpa POPTR_0008s16660 I 0.000
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.000
POPTR_0019s03490 Populus trichocarpa POPTR_0019s03490 I 0.000
PRUPE_ppa017235mg Prunus persica PRUPE_ppa017235mg I 0.000
Sb06g022660 Sorghum bicolor Sb06g022660 I 0.000
Sb06g027180 Sorghum bicolor Sb06g027180 I 0.000
Si010814m.g Setaria italica Si010814m.g I 0.000
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I 0.000
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I 0.000
TCM_004046 Theobroma cacao TCM_004046 I 0.000
TCM_007865 Theobroma cacao TCM_007865 I 0.000
TCM_020889 Theobroma cacao TCM_020889 I 0.000
TCM_026197 Theobroma cacao TCM_026197 I 0.000
TCM_030020 Theobroma cacao TCM_030020 I 0.000
VIT_05s0049g01010 Vitis vinifera VIT_05s0049g01010 I 0.000
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.000
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.000
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.000
Cla006077 Citrullus lanatus Cla006077 I 0.000
Pm015547 Prunus mume Pm015547 I 0.000
Pm030488 Prunus mume Pm030488 I 0.000
30169.m006322 Ricinus communis 30169.m006322 I 0.000
cassava3286.m1 Manihot esculenta cassava3286.m1 I 0.000
cassava35427.valid.m1 Manihot esculenta cassava35427.valid.m1 I 0.000
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.000
Aquca_017_00716 Aquilegia coerulea Aquca_017_00716 I 0.000
Aquca_030_00385 Aquilegia coerulea Aquca_030_00385 I 0.000
Aquca_034_00364 Aquilegia coerulea Aquca_034_00364 I 0.000
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I 0.000
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.000
Bostr.25219s0339 Boechera stricta Bostr.25219s0339 I 0.000
Bostr.7128s0256 Boechera stricta Bostr.7128s0256 I 0.000
Cagra.0824s0021 Capsella grandiflora Cagra.0824s0021 I 0.000
Cagra.1361s0065 Capsella grandiflora Cagra.1361s0065 I 0.000
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.000
Carubv10011190m.g Capsella rubella Carubv10011190m.g I 0.000
Carubv10020691m.g Capsella rubella Carubv10020691m.g I 0.000
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.000
Ciclev10005102m.g Citrus clementina Ciclev10005102m.g I 0.000
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I 0.000
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.000
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.000
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I 0.000
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.000
Eucgr.B02144 Eucalyptus grandis Eucgr.B02144 I 0.000
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.000
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.000
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.000
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.000
evm.TU.supercontig_50.19 Carica papaya evm.TU.supercontig_50.19 I 0.000
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.000
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.000
Gorai.002G106300 Gossypium raimondii Gorai.002G106300 I 0.000
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.000
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.000
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.000
Lus10011820.g Linum usitatissimum Lus10011820.g I 0.000
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.000
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.000
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.000
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.000
MDP0000145050 Malus domestica MDP0000145050 I 0.000
MDP0000155426 Malus domestica MDP0000155426 I 0.000
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.000
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I 0.000
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.000
orange1.1g045411m.g Citrus sinensis orange1.1g045411m.g I 0.000
SapurV1A.0006s0790 Salix purpurea SapurV1A.0006s0790 I 0.000
SapurV1A.0021s0930 Salix purpurea SapurV1A.0021s0930 I 0.000
SapurV1A.0483s0100 Salix purpurea SapurV1A.0483s0100 I 0.000
SapurV1A.1746s0010 Salix purpurea SapurV1A.1746s0010 I 0.000
Thhalv10008436m.g Eutrema salsugineum Thhalv10008436m.g I 0.000
Thhalv10008531m.g Eutrema salsugineum Thhalv10008531m.g I 0.000
Thhalv10018933m.g Eutrema salsugineum Thhalv10018933m.g I 0.000
PK03488.1 Cannabis sativa PK03488.1 I 0.000
PK08038.1 Cannabis sativa PK08038.1 I 0.000
PK20358.1 Cannabis sativa PK20358.1 I 0.000
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.000
Pm015302 Prunus mume Pm015302 N 0.000
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.000
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.000
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.000
MDP0000407613 Malus domestica MDP0000407613 N 0.000
PK24260.1 Cannabis sativa PK24260.1 N 0.000
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N 0.000