CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra039762
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra039762
T200014_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra039762.1-P
GRAS
127
483
LVHALLACAEAVQQNNLKLADVLVKHVGLLASSQAGAMRKVATYFAEGLARRIYRIYPRDDVGLSSFSDTLQIHFYECCPYLKFAHFTANQAILEAFATAEKVHVIDLGINQGLQWPALIQALALRPGGPPDFRLTGIGSSLTGQSIQEVGWKLGQLANAVGVNFEFKSIVLNSLSDLKQEMLEIRTGSESIAVNSVFELHRLLAHPGSIDNILLTIKSIKPDIITVVEQEADHNGAVFFDRFTESLHYYSSLFDSLEGPPSQDRVMSELYLGRQILNLVACEGEDRVERHETLAQWRNRFTMGGFKSVSIGSYAYKQASMLLALYAGADGYKVEENEGCLLLGWQTRPLIATSAWR
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RGL2
Arabidopsis lyrata
fgenesh2_kg.3__292__AT3G03450.1
I
0.709
GLYMA11G33720
Glycine max
GLYMA11G33720
I
0.703
GLYMA18G04500
Glycine max
GLYMA18G04500
I
0.706
POPTR_0004s08890
Populus trichocarpa
POPTR_0004s08890
I
0.709
Pm014329
Prunus mume
Pm014329
I
0.703
RGL1
Arabidopsis thaliana
AT1G66350
N
0.890
Bo2g052880
Brassica oleracea
Bo2g052880
N
0.938
F775_03572
Aegilops tauschii
F775_03572
N
0.704
RGL1
Arabidopsis lyrata
fgenesh2_kg.2__868__AT1G66350.1
N
0.889
Bostr.26959s0284
Boechera stricta
Bostr.26959s0284
N
0.831
Cagra.0463s0002
Capsella grandiflora
Cagra.0463s0002
N
0.816
Carubv10020171m.g
Capsella rubella
Carubv10020171m.g
N
0.823
SapurV1A.0102s0220
Salix purpurea
SapurV1A.0102s0220
N
0.706
Thhalv10018436m.g
Eutrema salsugineum
Thhalv10018436m.g
N
0.842