Pavir.Ia03770 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Ia03770 T203027_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia03770.1.p GRAS 359 730

Links

Other GRAS family TFs
Other Panicum virgatum TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.700
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N 0.708
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N 0.703
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.705
Sb01g039670 Sorghum bicolor Sb01g039670 N 0.951
Si034417m.g Setaria italica Si034417m.g N 0.965
TCM_021920 Theobroma cacao TCM_021920 N 0.703
Traes_5BL_C8BEC527F Triticum aestivum Traes_5BL_C8BEC527F N 0.922
Traes_5DL_8FD0CF6B9 Triticum aestivum Traes_5DL_8FD0CF6B9 N 0.924
OS03G0690600 Oryza sativa OS03G0690600 N 0.927
Pm002685 Prunus mume Pm002685 N 0.708
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N 0.735
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.703
gene18433-v1.0-hybrid Fragaria vesca gene18433-v1.0-hybrid N 0.739
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N 0.700
Pavir.J32327 Panicum virgatum Pavir.J32327 N 0.968
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.700
BGIOSGA010017 Oryza indica BGIOSGA010017 N 0.930
ORUFI03G31480 Oryza rufipogon ORUFI03G31480 N 0.895
ORGLA03G0287000 Oryza glaberrima ORGLA03G0287000 N 0.935
OPUNC03G27510 Oryza punctata OPUNC03G27510 N 0.938
ONIVA03G31510 Oryza nivara ONIVA03G31510 N 0.938
OMERI03G26460 Oryza meridionalis OMERI03G26460 N 0.935
OLONG_013585 Oryza longistaminata OLONG_013585 N 0.928
OGLUM03G30480 Oryza glumaepatula OGLUM03G30480 N 0.935
OBART03G30260 Oryza barthii OBART03G30260 N 0.935
OB03G37330 Oryza brachyantha OB03G37330 N 0.930
MLOC_73193 Hordeum vulgare MLOC_73193 N 0.932
LPERR03G24920 Leersia perrieri LPERR03G24920 N 0.938
GRMZM2G098784 Zea mays GRMZM2G098784 N 0.946
GRMZM2G049159 Zea mays GRMZM2G049159 N 0.959
F775_08186 Aegilops tauschii F775_08186 N 0.924
BRADI4G43680 Brachypodium distachyon BRADI4G43680 N 0.922