AMTR_s00051p00020930 (Amborella trichopoda)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 AMTR_s00051p00020930 T204393_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WUS
M06905_2.00 		Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA		 Dap-seq
OMalley et al.(2016)
WUS1_col_a 		0.793 0.737
WUS
M06906_2.00 		Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA		 Dap-seq
OMalley et al.(2016)
WUS1_colamp_a 		0.793 0.737
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN16606 Homeodomain 85 146

Links

Other Homeodomain family TFs
Other Amborella trichopoda TFs

451 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.000
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.000
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.000
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.000
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.000
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.000
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.000
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.000
NECAME_16525 Necator americanus NECAME_16525 N 0.000
NECAME_10840 Necator americanus NECAME_10840 N 0.000
nDi.2.2.2.g04713 Dirofilaria immitis nDi.2.2.2.g04713 N 0.000
NBR_0001132501 Nippostrongylus brasiliensis NBR_0001132501 N 0.000
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.000
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.000
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.000
L892_g2503 Steinernema scapterisci L892_g2503 N 0.000
L889_g29516 Steinernema feltiae L889_g29516 N 0.000
L596_g8199 Steinernema carpocapsae L596_g8199 N 0.000
HPLM_0000803901 Haemonchus placei HPLM_0000803901 N 0.000
HPBE_0002310801 Heligmosomoides bakeri HPBE_0002310801 N 0.000
HPBE_0001796801 Heligmosomoides bakeri HPBE_0001796801 N 0.000
HPBE_0000066401 Heligmosomoides bakeri HPBE_0000066401 N 0.000
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.000
EEL_0000629001 Elaeophora elaphi EEL_0000629001 N 0.000
SMUV_0000634201 Syphacia muris SMUV_0000634201 N 0.000
TELCIR_22690 Teladorsagia circumcincta TELCIR_22690 N 0.000
TELCIR_05217 Teladorsagia circumcincta TELCIR_05217 N 0.000
SVUK_0001398701 Strongylus vulgaris SVUK_0001398701 N 0.000
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.000
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.000
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.000
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.000
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.000
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.000
nLs.2.1.2.g02941 Litomosoides sigmodontis nLs.2.1.2.g02941 N 0.000
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.000
scaffold593-EXSNAP2012.5 Pristionchus exspectatus scaffold593-EXSNAP2012.5 N 0.000
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.000
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.000
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.000
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.000
OFLC_0000496201 Onchocerca flexuosa OFLC_0000496201 N 0.000
OESDEN_18796 Oesophagostomum dentatum OESDEN_18796 N 0.000
nOo.2.0.1.g01970 Onchocerca ochengi nOo.2.0.1.g01970 N 0.000
WBGene00237022 Onchocerca volvulus WBGene00237022 N 0.000
ALUE_0000448701 Ascaris lumbricoides ALUE_0000448701 N 0.000
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N 0.000
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N 0.000
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N 0.000
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N 0.000
Minc04648 Meloidogyne incognita Minc04648 N 0.000
Minc03634 Meloidogyne incognita Minc03634 N 0.000
Sakowv30021656m.g Saccoglossus kowalevskii Sakowv30021656m.g N 0.000
mgf006762m Mimulus guttatus mgf006762m N 0.000
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N 0.000
TCM_014800 Theobroma cacao TCM_014800 N 0.000
PPA12247 Pristionchus pacificus PPA12247 N 0.000
PPA06513 Pristionchus pacificus PPA06513 N 0.000
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.000
LotgiG207546 Lottia gigantea LotgiG207546 N 0.000
LOAG_14354 Loa loa LOAG_14354 N 0.000
EFV62220 Trichinella spiralis EFV62220 N 0.000
Bm6643 Brugia malayi Bm6643 N 0.000
ASU_05752 Ascaris suum ASU_05752 N 0.000
GPUH_0000029001 Gongylonema pulchrum GPUH_0000029001 N 0.000
EVEC_0000171701 Enterobius vermicularis EVEC_0000171701 N 0.000
WUBG_02390 Wuchereria bancrofti WUBG_02390 N 0.000
DME_0000590001 Dracunculus medinensis DME_0000590001 N 0.000
DICVIV_01337 Dictyocaulus viviparus DICVIV_01337 N 0.000
BXY_0253100 Bursaphelenchus xylophilus BXY_0253100 N 0.000
BTMF_0000229601 Brugia timori BTMF_0000229601 N 0.000
ASU_07820 Ascaris suum ASU_07820 N 0.000
HCOI00417600 Haemonchus contortus HCOI00417600 N 0.000
ASIM_0000156001 Anisakis simplex ASIM_0000156001 N 0.000
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.000
ANCDUO_24269 Ancylostoma duodenale ANCDUO_24269 N 0.000
ANCDUO_11855 Ancylostoma duodenale ANCDUO_11855 N 0.000
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.000
ANCCEY_10464 Ancylostoma ceylanicum ANCCEY_10464 N 0.000
ANCCAN_21637 Ancylostoma caninum ANCCAN_21637 N 0.000
ANCCAN_19939 Ancylostoma caninum ANCCAN_19939 N 0.000