ENSMEUG00000015905 (Macropus eugenii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSMEUG00000015905 T211440_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PBX2
M08134_2.00 		Homo sapiens
NWGAKTGACABN
NVTGTCAMTCWN		 ChIP-seq
Mathelier et al.(2014)
MA1113.1 		0.867 1.000
PBX2
M09165_2.00 		Homo sapiens
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C 		0.867 1.000
Pbx2
M09199_2.00 		Mus musculus
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C 		0.867 1.000
pbx4
M02110_2.00 		Tetraodon nigroviridis
TTGAYGDV
BHCRTCAA		 PBM
Weirauch et al.(2014)
pTH6425 		0.867 0.982
Pbx1
M00513_2.00 		Mus musculus
NNDKANNNN
NNNNTMHNN		 PBM
Berger et al.(2008)
Pbx1_3203 		0.867 0.965
PBX1
M05362_2.00 		Homo sapiens
NTGATKGAYR
YRTCMATCAN		 SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX 		0.867 0.965
PBX1
M05364_2.00 		Homo sapiens
DTGMTKGRYN
NRYCMAKCAH		 SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX 		0.867 0.965
PBX1
M02685_2.00 		Homo sapiens
WWTGATTGATND
HNATCAATCAWW		 SELEX
Mathelier et al.(2014)
MA0070.1 		0.867 0.965
PBX1
M09164_2.00 		Homo sapiens
DGABTGRCRG
CYGYCAVTCH		 Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A 		0.867 0.965
PBX1
M09561_2.00 		Homo sapiens
TGABTGACAGSC
GSCTGTCAVTCA		 Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007 		0.867 0.965
PBX1
M10748_2.00 		Homo sapiens
WTKATTRDT
AHYAATMAW		 Transfac
Matys et al.(2006)
V$PBX1_01 		0.867 0.965
PBX1
M10749_2.00 		Homo sapiens
DNHTTGATTGATKDB
VHMATCAATCAADNH		 Transfac
Matys et al.(2006)
V$PBX1_02 		0.867 0.965
PBX1
M10750_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_03 		0.867 0.965
PBX1
M10751_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_05 		0.867 0.965
PBX1
M10752_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_10 		0.867 0.965
PBX1
M10753_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_Q3 		0.867 0.965
PBX1
M05363_2.00 		Homo sapiens
DTGAKKGAYG
CRTCMMTCAH		 SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX 		0.867 0.965
PBX1
M05365_2.00 		Homo sapiens
MRTCAATCMH
DKGATTGAYK		 SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX 		0.867 0.965
Pbx3
M09205_2.00 		Mus musculus
BBBTGATTGRYNDN
NHNRYCAATCAVVV		 Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A 		0.865 0.965
exd
M06487_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Mathelier et al.(2014)
MA0222.1 		0.822 0.947
exd
M06243_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611 		0.822 0.947
exd
M06244_2.00 		Drosophila melanogaster
NWRNWYNAAA
TTTNRWNYWN		 B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611 		0.822 0.947
exd
M06245_2.00 		Drosophila melanogaster
NDTGAYRW
WYRTCAHN		 B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611 		0.822 0.947
exd
M06246_2.00 		Drosophila melanogaster
NNDTGAYR
YRTCAHNN		 B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611 		0.822 0.947
PBX4
M00277_2.00 		Homo sapiens
NNDDWHDNNN
NNNHDWHHNN		 PBM
Barrera et al.(2016)
PBX4_REF 		0.815 0.912
PBX4
M10649_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX4_01 		0.815 0.912
CBG10835
M01243_2.00 		Caenorhabditis briggsae
NNTKAYDNN
NNHRTMANN		 PBM
Lambert et al.(2019)
pTH11444 		0.691 0.579
PBX4
M00276_2.00 		Homo sapiens
NYTAATTADNN
NNHTAATTARN		 PBM
Barrera et al.(2016)
PBX4_R215Q 		0.677 0.895
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMEUP00000014529 Homeodomain 245 304

Links

Other Homeodomain family TFs
Other Macropus eugenii TFs

435 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10000643m.g Capsella rubella Carubv10000643m.g I
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I
Ca_21127 Cicer arietinum Ca_21127 I
Pm002704 Prunus mume Pm002704 I
29846.m000184 Ricinus communis 29846.m000184 I
cassava9078.m1 Manihot esculenta cassava9078.m1 I
Cucsa.175460 Cucumis sativus Cucsa.175460 I
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I
Lus10024394.g Linum usitatissimum Lus10024394.g I
Lus10025351.g Linum usitatissimum Lus10025351.g I
MDP0000219581 Malus domestica MDP0000219581 I
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I
MTR_7g461410 Medicago truncatula MTR_7g461410 I
Bo5g139340 Brassica oleracea Bo5g139340 I
Bra029762 Brassica rapa Bra029762 I
Bra034067 Brassica rapa Bra034067 I
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I
F775_10106 Aegilops tauschii F775_10106 I
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I
GLYMA07G15820 Glycine max GLYMA07G15820 I
GRMZM2G081919 Zea mays GRMZM2G081919 I
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I
LPERR01G31650 Leersia perrieri LPERR01G31650 I
Bo1g144510 Brassica oleracea Bo1g144510 I
MTR_7g061330 Medicago truncatula MTR_7g061330 I
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I
MYB3R-2 Oryza sativa OS01G0841500 I
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I
Sb03g039470 Sorghum bicolor Sb03g039470 I
SELMODRAFT_75978 Selaginella moellendorffii SELMODRAFT_75978 I
Si000842m.g Setaria italica Si000842m.g I
TCM_021936 Theobroma cacao TCM_021936 I
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I
PDK_20s1314361g001 Phoenix dactylifera PDK_20s1314361g001 N
e_gw1.3.910.1 Micromonas pusilla e_gw1.3.910.1 N
TRIUR3_33469 Triticum urartu TRIUR3_33469 N
OPUNC01G35700 Oryza punctata OPUNC01G35700 N
MLOC_50701 Hordeum vulgare MLOC_50701 N