MLOC_5727 (Hordeum vulgare)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 MLOC_5727 T220700_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.802 0.737
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.791 0.754
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.791 0.754
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.791 0.754
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.791 0.754
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.791 0.754
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.764 0.667
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.764 0.667
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.740 0.719
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.740 0.702
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.740 0.702
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_5727.1 Homeodomain 136 192

Links

Other Homeodomain family TFs
Other Hordeum vulgare TFs

694 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Med Drosophila melanogaster FBgn0011655 D
CpipJ_CPIJ002563 Culex pipiens CpipJ_CPIJ002563 I
WUBG_02880 Wuchereria bancrofti WUBG_02880 I
AAEL013896 Aedes aegypti AAEL013896 I
ACYPI000365 Acyrthosiphon pisum ACYPI000365 I
ACYPI005550 Acyrthosiphon pisum ACYPI005550 I
ADAC007516 Anopheles darlingi ADAC007516 I
AGAP002902 Anopheles gambiae AGAP002902 I
BGIBMGA010110 Bombyx mori BGIBMGA010110 I
Bm3575 Brugia malayi Bm3575 I
CGI_10018464 Crassostrea gigas CGI_10018464 I
CPIJ002563 Culex quinquefasciatus CPIJ002563 I
DAPPUDRAFT_304115 Daphnia pulex DAPPUDRAFT_304115 I
EFV62078 Trichinella spiralis EFV62078 I
ENSGACG00000003171 Gasterosteus aculeatus ENSGACG00000003171 I
SMAD4 Oryzias latipes ENSORLG00000007703 I
ENSPFOG00000019807 Poecilia formosa ENSPFOG00000019807 I
ENSPMAG00000008404 Petromyzon marinus ENSPMAG00000008404 I
SMAD4 Tetraodon nigroviridis ENSTNIG00000009050 I
SMAD4 Takifugu rubripes ENSTRUG00000014045 I
ENSXMAG00000005051 Xiphophorus maculatus ENSXMAG00000005051 I
GA14643 Drosophila pseudoobscura FBgn0074670 I
GF22974 Drosophila ananassae FBgn0099968 I
GG11819 Drosophila erecta FBgn0104114 I
GH18642 Drosophila grimshawi FBgn0126109 I
GI23400 Drosophila mojavensis FBgn0146126 I
GL23637 Drosophila persimilis FBgn0161227 I
GM16436 Drosophila sechellia FBgn0171351 I
GJ23092 Drosophila virilis FBgn0210194 I
GK11724 Drosophila willistoni FBgn0213735 I
GE10952 Drosophila yakuba FBgn0228782 I
GB50071 Apis mellifera GB50071 I
HelroG76435 Helobdella robusta HelroG76435 I
HMEL002203 Heliconius melpomene HMEL002203 I
ISCW018468 Ixodes scapularis ISCW018468 I
KGM_12572 Danaus plexippus KGM_12572 I
L798_13939 Zootermopsis nevadensis L798_13939 I
LOAG_08923 Loa loa LOAG_08923 I
MCINX014520 Melitaea cinxia MCINX014520 I
ML02191a Mnemiopsis leidyi ML02191a I
NEMVEDRAFT_v1g248037 Nematostella vectensis NEMVEDRAFT_v1g248037 I
NV12984 Nasonia vitripennis NV12984 I
PHUM002670 Pediculus humanus PHUM002670 I
RPRC010188 Rhodnius prolixus RPRC010188 I
SINV15516 Solenopsis invicta SINV15516 I
SMAR013850 Strigamia maritima SMAR013850 I
SPU_004287 Strongylocentrotus purpuratus SPU_004287 I
TC010848 Tribolium castaneum TC010848 I
WBGene00241622 Onchocerca volvulus WBGene00241622 I
YQE_06624 Dendroctonus ponderosae YQE_06624 I
YQE_08737 Dendroctonus ponderosae YQE_08737 I
Cflo_07183--XP_392838.3_APIME Camponotus floridanus Cflo_07183--XP_392838.3_APIME I
Hsal_09633--XP_392838.3_APIME Harpegnathos saltator Hsal_09633--XP_392838.3_APIME I
CLEC002594 Cimex lectularius CLEC002594 I
HHAL000393-PA Halyomorpha halys HHAL000393-PA I
HHAL000394-PA Halyomorpha halys HHAL000394-PA I
LCUP007928 Lucilia cuprina LCUP007928 I
LDEC015949 Leptinotarsa decemlineata LDEC015949 I
Minc05381 Meloidogyne incognita Minc05381 I
Minc06628 Meloidogyne incognita Minc06628 I
AALB009485 Anopheles albimanus AALB009485 I
AARA004719 Anopheles arabiensis AARA004719 I
AATE010695 Anopheles atroparvus AATE010695 I
ACHR000067 Anopheles christyi ACHR000067 I
ACOM037505 Anopheles coluzzii ACOM037505 I
ACUA025512 Anopheles culicifacies ACUA025512 I
ADIR002761 Anopheles dirus ADIR002761 I
AEPI002385 Anopheles epiroticus AEPI002385 I
AFAF011208 Anopheles farauti AFAF011208 I
AFUN009864 Anopheles funestus AFUN009864 I
AMAM019778 Anopheles maculatus AMAM019778 I
AMEC018109 Anopheles melas AMEC018109 I
AMEM015931 Anopheles merus AMEM015931 I
AMIN000723 Anopheles minimus AMIN000723 I
AQUA009305 Anopheles quadriannulatus AQUA009305 I
ASTEI00079 Anopheles stephensi ASTEI00079 I
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I
MDOA012885 Musca domestica MDOA012885 I
PPAI002168 Phlebotomus papatasi PPAI002168 I
ANCCAN_20978 Ancylostoma caninum ANCCAN_20978 I
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I
ASU_13433 Ascaris suum ASU_13433 I
BTMF_0000404601 Brugia timori BTMF_0000404601 I
D917_09719 Trichinella nativa D917_09719 I
D918_00298 Trichuris suis D918_00298 I
EEL_0000707501 Elaeophora elaphi EEL_0000707501 I
EVEC_0000355201 Enterobius vermicularis EVEC_0000355201 I
GPUH_0001329001 Gongylonema pulchrum GPUH_0001329001 I
HPBE_0001599301 Heligmosomoides bakeri HPBE_0001599301 I
L596_g15 Steinernema carpocapsae L596_g15 I
L889_g28104 Steinernema feltiae L889_g28104 I
L892_g27454 Steinernema scapterisci L892_g27454 I
L893_g344 Steinernema glaseri L893_g344 I
L898_g17086 Steinernema monticolum L898_g17086 I
maker-nMf.1.1.scaf02670-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf02670-augustus-gene-0.3 I
nAv.1.0.1.g00430 Acanthocheilonema viteae nAv.1.0.1.g00430 I
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I
nLs.2.1.2.g01457 Litomosoides sigmodontis nLs.2.1.2.g01457 I
nOo.2.0.1.g00181 Onchocerca ochengi nOo.2.0.1.g00181 I
OESDEN_03018 Oesophagostomum dentatum OESDEN_03018 I
SVUK_0000938201 Strongylus vulgaris SVUK_0000938201 I
TCLT_0000917301 Thelazia callipaeda TCLT_0000917301 I
TELCIR_19676 Teladorsagia circumcincta TELCIR_19676 I
TMUE_s0006012700 Trichuris muris TMUE_s0006012700 I
TTRE_0000855901 Trichuris trichiura TTRE_0000855901 I
Minc15475 Meloidogyne incognita Minc15475 N
ACOC_0000990601 Angiostrongylus costaricensis ACOC_0000990601 N
ANCCAN_20979 Ancylostoma caninum ANCCAN_20979 N
ANCCEY_04158 Ancylostoma ceylanicum ANCCEY_04158 N
ANCDUO_23180 Ancylostoma duodenale ANCDUO_23180 N
genemark-nMf.1.1.scaf08549-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf08549-processed-gene-0.3 N
MhA1_Contig1148.frz3.fgene1 Meloidogyne hapla MhA1_Contig1148.frz3.fgene1 N
NBR_0001502601 Nippostrongylus brasiliensis NBR_0001502601 N
NECAME_01081 Necator americanus NECAME_01081 N