TCM_029776 (Theobroma cacao)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 TCM_029776 T223925_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WOX11
M06916_2.00 		Arabidopsis thaliana
ADTTAATTAVD
HBTAATTAAHT		 Dap-seq
OMalley et al.(2016)
WOX11_col_a 		0.726 0.684
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY28117 Homeodomain 54 115

Links

Other Homeodomain family TFs
Other Theobroma cacao TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cic Mus musculus ENSMUSG00000005442 D
cic Drosophila melanogaster FBgn0262582 D
gei-3 Caenorhabditis elegans WBGene00001560 D
CpipJ_CPIJ012202 Culex pipiens CpipJ_CPIJ012202 I
WUBG_04884 Wuchereria bancrofti WUBG_04884 I
AAEL004381 Aedes aegypti AAEL004381 I
ACEP18843 Atta cephalotes ACEP18843 I
ACYPI004663 Acyrthosiphon pisum ACYPI004663 I
ADAC008993 Anopheles darlingi ADAC008993 I
AGAP013411 Anopheles gambiae AGAP013411 I
BGIBMGA010263 Bombyx mori BGIBMGA010263 I
Bm5934 Brugia malayi Bm5934 I
CapteG39126 Capitella teleta CapteG39126 I
CBN17413 Caenorhabditis brenneri CBN17413 I
CGI_10015746 Crassostrea gigas CGI_10015746 I
CJA07419 Caenorhabditis japonica CJA07419 I
CPIJ012202 Culex quinquefasciatus CPIJ012202 I
CRE24068 Caenorhabditis remanei CRE24068 I
ENSAMXG00000014362 Astyanax mexicanus ENSAMXG00000014362 I
ENSAMXG00000018358 Astyanax mexicanus ENSAMXG00000018358 I
ENSBTAG00000019785 Bos taurus ENSBTAG00000019785 I
CIC Canis familiaris ENSCAFG00000004858 I
ENSCING00000007655 Ciona intestinalis ENSCING00000007655 I
CIC Callithrix jacchus ENSCJAG00000012847 I
ENSCPOG00000004391 Cavia porcellus ENSCPOG00000004391 I
cica Danio rerio ENSDARG00000071150 I
CIC Dasypus novemcinctus ENSDNOG00000047657 I
Cic Dipodomys ordii ENSDORG00000008822 I
CIC Equus caballus ENSECAG00000011342 I
SOX8 Equus caballus ENSECAG00000016320 I
CIC Echinops telfairi ENSETEG00000017271 I
ENSFCAG00000012737 Felis catus ENSFCAG00000012737 I
SOX2 Felis catus ENSFCAG00000029205 I
CIC Homo sapiens ENSG00000079432 I
cicb Gasterosteus aculeatus ENSGACG00000009452 I
CIC Gorilla gorilla ENSGGOG00000000192 I
ENSGMOG00000005167 Gadus morhua ENSGMOG00000005167 I
ENSLACG00000002764 Latimeria chalumnae ENSLACG00000002764 I
ENSLOCG00000011834 Lepisosteus oculatus ENSLOCG00000011834 I
ENSMEUG00000016625 Macropus eugenii ENSMEUG00000016625 I
ENSMICG00000015176 Microcebus murinus ENSMICG00000015176 I
ENSMLUG00000016650 Myotis lucifugus ENSMLUG00000016650 I
ENSMMUG00000012174 Macaca mulatta ENSMMUG00000012174 I
ENSMPUG00000007557 Mustela putorius furo ENSMPUG00000007557 I
ENSNLEG00000010614 Nomascus leucogenys ENSNLEG00000010614 I
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I
ENSOARG00000000906 Ovis aries ENSOARG00000000906 I
ENSOARG00000007985 Ovis aries ENSOARG00000007985 I
ENSOCUG00000006458 Oryctolagus cuniculus ENSOCUG00000006458 I
CIC Otolemur garnettii ENSOGAG00000003964 I
ENSONIG00000004979 Oreochromis niloticus ENSONIG00000004979 I
ENSONIG00000013108 Oreochromis niloticus ENSONIG00000013108 I
cica Oryzias latipes ENSORLG00000007091 I
cicb Oryzias latipes ENSORLG00000013259 I
ENSPANG00000005859 Papio anubis ENSPANG00000005859 I
ENSPANG00000009039 Papio anubis ENSPANG00000009039 I
SOX2 Procavia capensis ENSPCAG00000003690 I
CIC Procavia capensis ENSPCAG00000017001 I
ENSPFOG00000000116 Poecilia formosa ENSPFOG00000000116 I
ENSPFOG00000016231 Poecilia formosa ENSPFOG00000016231 I
ENSPPYG00000010041 Pongo abelii ENSPPYG00000010041 I
CIC Pan troglodytes ENSPTRG00000011051 I
CIC Pteropus vampyrus ENSPVAG00000016806 I
Cic Rattus norvegicus ENSRNOG00000056118 I
CIC Sus scrofa ENSSSCG00000003030 I
ENSSTOG00000000852 Ictidomys tridecemlineatus ENSSTOG00000000852 I
ENSSTOG00000011011 Ictidomys tridecemlineatus ENSSTOG00000011011 I
CIC Tupaia belangeri ENSTBEG00000009044 I
CIC Tetraodon nigroviridis ENSTNIG00000003521 I
CIC Takifugu rubripes ENSTRUG00000007193 I
CIC Tursiops truncatus ENSTTRG00000013873 I
GF17645 Drosophila ananassae FBgn0094663 I
GG23823 Drosophila erecta FBgn0115962 I
GH23608 Drosophila grimshawi FBgn0131065 I
GI22721 Drosophila mojavensis FBgn0145448 I
GL12097 Drosophila persimilis FBgn0149705 I
GM23104 Drosophila sechellia FBgn0177972 I
GD19345 Drosophila simulans FBgn0190847 I
GJ23448 Drosophila virilis FBgn0210547 I
GK10919 Drosophila willistoni FBgn0212930 I
GE25659 Drosophila yakuba FBgn0242721 I
GA30228 Drosophila pseudoobscura FBgn0263363 I
GB43462 Apis mellifera GB43462 I
HMEL002398 Heliconius melpomene HMEL002398 I
KGM_16941 Danaus plexippus KGM_16941 I
L798_08623 Zootermopsis nevadensis L798_08623 I
LOAG_17202 Loa loa LOAG_17202 I
MCINX015089 Melitaea cinxia MCINX015089 I
MESCA012239 Megaselia scalaris MESCA012239 I
NV10910 Nasonia vitripennis NV10910 I
PHUM079880 Pediculus humanus PHUM079880 I
RPRC001090 Rhodnius prolixus RPRC001090 I
SMAR009315 Strigamia maritima SMAR009315 I
SPU_023037 Strongylocentrotus purpuratus SPU_023037 I
SPU_025292 Strongylocentrotus purpuratus SPU_025292 I
TC004697 Tribolium castaneum TC004697 I
tetur21g00740 Tetranychus urticae tetur21g00740 I
sox-2 Caenorhabditis elegans WBGene00004949 I
WBGene00241539 Onchocerca volvulus WBGene00241539 I
YQE_03282 Dendroctonus ponderosae YQE_03282 I
Alligator_sinensis_CCG005631.1 Alligator sinensis Alligator_sinensis_CCG005631.1 I
Cflo_01544--XP_624175.2_APIME Camponotus floridanus Cflo_01544--XP_624175.2_APIME I
Cmyd_10001800 Chelonia mydas Cmyd_10001800 I
ENSP00000160740-D1 Bos grunniens ENSP00000160740-D1 I
ENSP00000160740 Macaca fascicularis ENSP00000160740 I
ENSP00000322568 Macaca fascicularis ENSP00000322568 I
Hsal_08911--XP_624175.2_APIME Harpegnathos saltator Hsal_08911--XP_624175.2_APIME I
Myotis_brandtii_Cic_10007129 Myotis brandtii Myotis_brandtii_Cic_10007129 I
Myotis_brandtii_SOX2_10019709 Myotis brandtii Myotis_brandtii_SOX2_10019709 I
Ogr10275 Ophisaurus gracilis Ogr10275 I
Pvit_02876 Pogona vitticeps Pvit_02876 I
gw.448.64.1 Branchiostoma floridae gw.448.64.1 I
gw.46.292.1 Branchiostoma floridae gw.46.292.1 I
Ocbimv22037932m.g Octopus bimaculoides Ocbimv22037932m.g I
Sakowv30042695m.g Saccoglossus kowalevskii Sakowv30042695m.g I
CLEC003268 Cimex lectularius CLEC003268 I
HHAL000065-PA Halyomorpha halys HHAL000065-PA I
LCUP009387 Lucilia cuprina LCUP009387 I
LDEC018997 Leptinotarsa decemlineata LDEC018997 I
cic Xenopus tropicalis XB-GENE-6467430 I
AALB003439 Anopheles albimanus AALB003439 I
AARA001217 Anopheles arabiensis AARA001217 I
ACHR006446 Anopheles christyi ACHR006446 I
ACOM029353 Anopheles coluzzii ACOM029353 I
ACUA015009 Anopheles culicifacies ACUA015009 I
ADIR003322 Anopheles dirus ADIR003322 I
AEPI005675 Anopheles epiroticus AEPI005675 I
AFAF009600 Anopheles farauti AFAF009600 I
AFUN006011 Anopheles funestus AFUN006011 I
AMAM017484 Anopheles maculatus AMAM017484 I
AMEC000538 Anopheles melas AMEC000538 I
AMEC010127 Anopheles melas AMEC010127 I
AMEM005678 Anopheles merus AMEM005678 I
AMIN003810 Anopheles minimus AMIN003810 I
AQUA008168 Anopheles quadriannulatus AQUA008168 I
ASTEI00261 Anopheles stephensi ASTEI00261 I
BGLB001462 Biomphalaria glabrata BGLB001462 I
LLOJ007756 Lutzomyia longipalpis LLOJ007756 I
MDOA004531 Musca domestica MDOA004531 I
ANCCAN_00149 Ancylostoma caninum ANCCAN_00149 I
ANCCEY_04123 Ancylostoma ceylanicum ANCCEY_04123 I
ANCDUO_05529 Ancylostoma duodenale ANCDUO_05529 I
ASIM_0000334601 Anisakis simplex ASIM_0000334601 I
ASU_10300 Ascaris suum ASU_10300 I
csin108932 Clonorchis sinensis csin108932 I
D917_02434 Trichinella nativa D917_02434 I
D918_06270 Trichuris suis D918_06270 I
GPLIN_000596700 Globodera pallida GPLIN_000596700 I
GPUH_0001970101 Gongylonema pulchrum GPUH_0001970101 I
Hba_18941 Heterorhabditis bacteriophora Hba_18941 I
L596_g5739 Steinernema carpocapsae L596_g5739 I
L889_g11174 Steinernema feltiae L889_g11174 I
L892_g3879 Steinernema scapterisci L892_g3879 I
L893_g26751 Steinernema glaseri L893_g26751 I
L898_g8837 Steinernema monticolum L898_g8837 I
nAv.1.0.1.g00032 Acanthocheilonema viteae nAv.1.0.1.g00032 I
nDi.2.2.2.g01012 Dirofilaria immitis nDi.2.2.2.g01012 I
nLs.2.1.2.g07996 Litomosoides sigmodontis nLs.2.1.2.g07996 I
nOo.2.0.1.g00287 Onchocerca ochengi nOo.2.0.1.g00287 I
OESDEN_00065 Oesophagostomum dentatum OESDEN_00065 I
OFLC_0001331401 Onchocerca flexuosa OFLC_0001331401 I
RSKR_0000077800 Rhabditophanes kr3021 RSKR_0000077800 I
SBAD_0000026401 Soboliphyme baturini SBAD_0000026401 I
SVUK_0000932601 Strongylus vulgaris SVUK_0000932601 I
T265_14506 Opisthorchis viverrini T265_14506 I
TCLT_0000608401 Thelazia callipaeda TCLT_0000608401 I
TMUE_s0223001200 Trichuris muris TMUE_s0223001200 I
TTRE_0000098801 Trichuris trichiura TTRE_0000098801 I
A1O9_05704 Exophiala aquamarina A1O9_05704 N
AOL_s00081g337 Arthrobotrys oligospora AOL_s00081g337 N
CFIO01_04514 Colletotrichum fioriniae CFIO01_04514 N
DRE_00029 Drechslerella stenobrocha DRE_00029 N
GLOINDRAFT_323774 Rhizophagus irregularis GLOINDRAFT_323774 N
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N
GYMLUDRAFT_143012 Gymnopus luxurians GYMLUDRAFT_143012 N
H072_9933 Dactylellina haptotyla H072_9933 N
HYDPIDRAFT_51400 Hydnomerulius pinastri HYDPIDRAFT_51400 N
LACBIDRAFT_333050 Laccaria bicolor LACBIDRAFT_333050 N
MESCA006364 Megaselia scalaris MESCA006364 N
PDIP_33190 Penicillium digitatum PDIP_33190 N
PEX1_064750 Penicillium expansum PEX1_064750 N
PFICI_02946 Pestalotiopsis fici PFICI_02946 N
PLICRDRAFT_78649 Plicaturopsis crispa PLICRDRAFT_78649 N
POSPLDRAFT_104634 Postia placenta POSPLDRAFT_104634 N
PSEUBRA_SCAF2g02551 Pseudozyma brasiliensis PSEUBRA_SCAF2g02551 N
PTTG_00444 Puccinia triticina PTTG_00444 N
RPRC001038 Rhodnius prolixus RPRC001038 N
SERLA73DRAFT_139986 Serpula lacrymans SERLA73DRAFT_139986 N
Thaps7519 Thalassiosira pseudonana Thaps7519 N
UCREL1_469 Eutypa lata UCREL1_469 N
UCREL1_749 Eutypa lata UCREL1_749 N
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N
YQE_08562 Dendroctonus ponderosae YQE_08562 N
Afo_R012670 Aptenodytes forsteri Afo_R012670 N
Brh_R004116 Buceros rhinoceros Brh_R004116 N
Ogr08337 Ophisaurus gracilis Ogr08337 N
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N
gw.110.115.1 Branchiostoma floridae gw.110.115.1 N
LDEC019307 Leptinotarsa decemlineata LDEC019307 N
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N
SMU15030186 Schmidtea mediterranea SMU15030186 N
XP_002935940 Xenopus tropicalis XP_002935940 N
AMEM007694 Anopheles merus AMEM007694 N
PPAI003639 Phlebotomus papatasi PPAI003639 N
GPLIN_000970900 Globodera pallida GPLIN_000970900 N
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N
MCOS_0000919201 Mesocestoides corti MCOS_0000919201 N
PXEA_0000763901 Protopolystoma xenopodis PXEA_0000763901 N
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N
TRE_0000259001 Trichobilharzia regenti TRE_0000259001 N
TTAC_0001064401 Hydatigera taeniaeformis TTAC_0001064401 N