evm.TU.supercontig_6.244 (Carica papaya)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 evm.TU.supercontig_6.244 T228561_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WUS
M06905_2.00 		Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA		 Dap-seq
OMalley et al.(2016)
WUS1_col_a 		0.828 0.860
WUS
M06906_2.00 		Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA		 Dap-seq
OMalley et al.(2016)
WUS1_colamp_a 		0.828 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_6.244 Homeodomain 27 89

Links

Other Homeodomain family TFs
Other Carica papaya TFs

464 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10010833m.g Capsella rubella Carubv10010833m.g N
Carubv10022431m.g Capsella rubella Carubv10022431m.g N
Carubv10022123m.g Capsella rubella Carubv10022123m.g N
Carubv10022052m.g Capsella rubella Carubv10022052m.g N
Carubv10021838m.g Capsella rubella Carubv10021838m.g N
Carubv10021725m.g Capsella rubella Carubv10021725m.g N
Carubv10021446m.g Capsella rubella Carubv10021446m.g N
Carubv10021362m.g Capsella rubella Carubv10021362m.g N
Carubv10021267m.g Capsella rubella Carubv10021267m.g N
Carubv10012479m.g Capsella rubella Carubv10012479m.g N
Carubv10012214m.g Capsella rubella Carubv10012214m.g N
Carubv10011216m.g Capsella rubella Carubv10011216m.g N
AGL64 Arabidopsis thaliana AT1G29962 N
Carubv10010438m.g Capsella rubella Carubv10010438m.g N
Carubv10010430m.g Capsella rubella Carubv10010430m.g N
Carubv10002787m.g Capsella rubella Carubv10002787m.g N
Carubv10002712m.g Capsella rubella Carubv10002712m.g N
Carubv10002683m.g Capsella rubella Carubv10002683m.g N
Cagra.5647s0017 Capsella grandiflora Cagra.5647s0017 N
Cagra.18025s0001 Capsella grandiflora Cagra.18025s0001 N
Cagra.12398s0004 Capsella grandiflora Cagra.12398s0004 N
Bostr.15697s0292 Boechera stricta Bostr.15697s0292 N
AGL85 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002660 N