ENSGALG00000006448 (Gallus gallus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSGALG00000006448 T244100_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.743 0.743
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.733 0.733
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.733 0.733
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.733 0.733
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.733 0.733
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.733 0.733
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.733 0.733
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.733 0.733
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.733 0.733
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.733 0.733
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.733 0.733
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.733 0.733
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.733 0.733
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.733 0.733
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.733 0.733
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.733 0.733
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.733 0.733
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.733 0.733
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.733 0.733
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.733 0.733
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.733 0.733
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.733 0.733
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.733 0.733
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000010392 IRF 9 114

Links

Other IRF family TFs
Other Gallus gallus TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I
C1orf35 Otolemur garnettii ENSOGAG00000010978 I
OMERI10G00680 Oryza meridionalis OMERI10G00680 I
chr4.CM0387.290.nc Lotus japonicus chr4.CM0387.290.nc N
PK28293.1 Cannabis sativa PK28293.1 N
SapurV1A.0055s0040 Salix purpurea SapurV1A.0055s0040 N
SapurV1A.0015s0840 Salix purpurea SapurV1A.0015s0840 N
orange1.1g022806m.g Citrus sinensis orange1.1g022806m.g N
MDP0000826219 Malus domestica MDP0000826219 N
MDP0000320521 Malus domestica MDP0000320521 N
Gorai.002G171200 Gossypium raimondii Gorai.002G171200 N
gene00620-v1.0-hybrid Fragaria vesca gene00620-v1.0-hybrid N
evm.TU.supercontig_2.121 Carica papaya evm.TU.supercontig_2.121 N
Eucgr.G02067 Eucalyptus grandis Eucgr.G02067 N
Ciclev10015354m.g Citrus clementina Ciclev10015354m.g N
Cucsa.026600 Cucumis sativus Cucsa.026600 N
cassava39873.m1 Manihot esculenta cassava39873.m1 N
cassava18078.valid.m1 Manihot esculenta cassava18078.valid.m1 N
cassava18077.valid.m1 Manihot esculenta cassava18077.valid.m1 N
29780.m001393 Ricinus communis 29780.m001393 N
Pm005924 Prunus mume Pm005924 N
Cla005911 Citrullus lanatus Cla005911 N
TCM_011212 Theobroma cacao TCM_011212 N
PRUPE_ppa009765mg Prunus persica PRUPE_ppa009765mg N
POPTR_0010s11180 Populus trichocarpa POPTR_0010s11180 N
POPTR_0008s13960 Populus trichocarpa POPTR_0008s13960 N
GLYMA08G09780 Glycine max GLYMA08G09780 N
GLYMA05G26790 Glycine max GLYMA05G26790 N