Cla004059 (Citrullus lanatus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Cla004059 T246327_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla004059 LOB 13 112

Links

Other LOB family TFs
Other Citrullus lanatus TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava15468.m1 Manihot esculenta cassava15468.m1 I 0.745
LjSGA_054888.1 Lotus japonicus LjSGA_054888.1 I 0.716
PK00972.1 Cannabis sativa PK00972.1 I 0.800
SapurV1A.0281s0190 Salix purpurea SapurV1A.0281s0190 I 0.768
Gorai.011G267700 Gossypium raimondii Gorai.011G267700 I 0.798
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I 0.768
Eucgr.G02955 Eucalyptus grandis Eucgr.G02955 I 0.788
Ciclev10033354m.g Citrus clementina Ciclev10033354m.g I 0.737
TCM_042730 Theobroma cacao TCM_042730 I 0.818
POPTR_0010s20800 Populus trichocarpa POPTR_0010s20800 I 0.778
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I 0.709
LBD33 Arabidopsis thaliana AT5G06080 N 0.768
PRUPE_ppa018815mg Prunus persica PRUPE_ppa018815mg N 0.727
Bo9g176580 Brassica oleracea Bo9g176580 N 0.747
Bra009161 Brassica rapa Bra009161 N 0.747
MDP0000133936 Malus domestica MDP0000133936 N 0.737
MDP0000123797 Malus domestica MDP0000123797 N 0.737
GLYMA02G41710 Glycine max GLYMA02G41710 N 0.737
gene26330-v1.0-hybrid Fragaria vesca gene26330-v1.0-hybrid N 0.747
GLYMA14G07260 Glycine max GLYMA14G07260 N 0.758
MTR_5g080470 Medicago truncatula MTR_5g080470 N 0.758
Carubv10002921m.g Capsella rubella Carubv10002921m.g N 0.778
Cagra.2117s0054 Capsella grandiflora Cagra.2117s0054 N 0.778
Bostr.13129s0366 Boechera stricta Bostr.13129s0366 N 0.768
Cucsa.165150 Cucumis sativus Cucsa.165150 N 0.980
cassava34632.m1 Manihot esculenta cassava34632.m1 N 0.778
LBD33 Arabidopsis lyrata Al_scaffold_0006_527 N 0.778
30143.m001171 Ricinus communis 30143.m001171 N 0.758
Pm018835 Prunus mume Pm018835 N 0.727
Ca_16122 Cicer arietinum Ca_16122 N 0.778
LBD33 Vitis vinifera VIT_13s0019g02060 N 0.768