OB05G22290 (Oryza brachyantha)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OB05G22290 T254907_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OB05G22290.1 MADS box 19 66

Links

Other MADS box family TFs
Other Oryza brachyantha TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ERF019 Arabidopsis thaliana AT1G22810 D
scaffold_102587.1 Arabidopsis lyrata scaffold_102587.1 I
ERF020 Arabidopsis thaliana AT1G71520 I
TCM_036224 Theobroma cacao TCM_036224 I
Ca_15055 Cicer arietinum Ca_15055 I
Cla012182 Citrullus lanatus Cla012182 I
29938.m000611 Ricinus communis 29938.m000611 I
mgf010891m Mimulus guttatus mgf010891m I
Bostr.10273s0198 Boechera stricta Bostr.10273s0198 I
Bostr.12659s0135 Boechera stricta Bostr.12659s0135 I
Cagra.0114s0023 Capsella grandiflora Cagra.0114s0023 I
Cagra.2418s0007 Capsella grandiflora Cagra.2418s0007 I
Carubv10011955m.g Capsella rubella Carubv10011955m.g I
Carubv10022408m.g Capsella rubella Carubv10022408m.g I
Ciclev10023345m.g Citrus clementina Ciclev10023345m.g I
Eucgr.F02967 Eucalyptus grandis Eucgr.F02967 I
evm.TU.supercontig_21.63 Carica papaya evm.TU.supercontig_21.63 I
Lus10006179.g Linum usitatissimum Lus10006179.g I
Lus10009468.g Linum usitatissimum Lus10009468.g I
Lus10041044.g Linum usitatissimum Lus10041044.g I
orange1.1g045327m.g Citrus sinensis orange1.1g045327m.g I
SapurV1A.2173s0020 Salix purpurea SapurV1A.2173s0020 I
SapurV1A.3847s0010 Salix purpurea SapurV1A.3847s0010 I
SapurV1A.4200s0010 Salix purpurea SapurV1A.4200s0010 I
Thhalv10009842m.g Eutrema salsugineum Thhalv10009842m.g I
Thhalv10019510m.g Eutrema salsugineum Thhalv10019510m.g I
chr2.CM0018.340.nd Lotus japonicus chr2.CM0018.340.nd I
Bra012345 Brassica rapa Bra012345 I
MTR_5g008790 Medicago truncatula MTR_5g008790 I
GLYMA11G01700 Glycine max GLYMA11G01700 I
fgenesh2_kg.2__1411__AT1G71520.1 Arabidopsis lyrata fgenesh2_kg.2__1411__AT1G71520.1 I
Bra024539 Brassica rapa Bra024539 I
Bra016133 Brassica rapa Bra016133 I
Bra007974 Brassica rapa Bra007974 I
Bo7g057680 Brassica oleracea Bo7g057680 I
Bo6g113060 Brassica oleracea Bo6g113060 I
POPTR_0013s10420 Populus trichocarpa POPTR_0013s10420 I
POPTR_0019s10220 Populus trichocarpa POPTR_0019s10220 I
Bo5g038890 Brassica oleracea Bo5g038890 I
Bo2g072950 Brassica oleracea Bo2g072950 I
OB01G48490 Oryza brachyantha OB01G48490 N
MDP0000932292 Malus domestica MDP0000932292 N
gene27062-v1.0-hybrid Fragaria vesca gene27062-v1.0-hybrid N
GLYMA01G44230 Glycine max GLYMA01G44230 N
BGIOSGA004939 Oryza indica BGIOSGA004939 N
GSMUA_Achr10G04450_001 Musa acuminata GSMUA_Achr10G04450_001 N
Sb03g042060 Sorghum bicolor Sb03g042060 N
OGLUM01G43950 Oryza glumaepatula OGLUM01G43950 N
OMERI01G36600 Oryza meridionalis OMERI01G36600 N
ONIVA01G44590 Oryza nivara ONIVA01G44590 N
ORUFI01G43070 Oryza rufipogon ORUFI01G43070 N
Aquca_001_00483 Aquilegia coerulea Aquca_001_00483 N
OS01G0885900 Oryza sativa OS01G0885900 N
Cucsa.088640 Cucumis sativus Cucsa.088640 N
cassava9593.m1 Manihot esculenta cassava9593.m1 N
PGSC0003DMG400008734 Solanum tuberosum PGSC0003DMG400008734 N
Pm004265 Prunus mume Pm004265 N
TRAES3BF106000020CFD_g Triticum aestivum TRAES3BF106000020CFD_g N
PRUPE_ppa020605mg Prunus persica PRUPE_ppa020605mg N
Solyc01g057080.1 Solanum lycopersicum Solyc01g057080.1 N